Plant Circular RNA Database

Detail information of Csa6G139140_circ_g.8

			
						 General Information
					
						CircRNA Name
						Csa6G139140_circ_g.8
					
						ID in PlantcircBase
						csa_circ_003772
					
						Alias
						Chr6:9783353_9788312
					
						Organism
						
							Cucumis sativus						
					
						Position
						
							chrChr6: 9783353-9788312  JBrowse»						
					
						Reference genome
						
							Cucumis sativus v1.5						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI2;Find_circ
					
						Parent gene
						
							Csa6G139140						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							Csa6G139140_circ_g.1 Csa6G139140_circ_g.2 Csa6G139140_circ_g.3 Chr6_circ_ig.56 Csa6G139140_circ_g.4 Csa6G139140_circ_g.5 Csa6G139140_circ_g.6 Csa6G139140_circ_g.7 Csa6G139140_circ_g.9 Csa6G139140_circ_g.10 Csa6G139140_circ_g.11 						
					
						Support reads
						NA
					
						Tissues
						leaf,root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Csa6G139140.1:4

General Information
CircRNA Name	Csa6G139140_circ_g.8
ID in PlantcircBase	csa_circ_003772
Alias	Chr6:9783353_9788312
Organism	Cucumis sativus
Position	chrChr6: 9783353-9788312 JBrowse»
Reference genome	Cucumis sativus v1.5
Type	e-circRNA
Identification method	CIRI2;Find_circ
Parent gene	Csa6G139140
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	Csa6G139140_circ_g.1 Csa6G139140_circ_g.2 Csa6G139140_circ_g.3 Chr6_circ_ig.56 Csa6G139140_circ_g.4 Csa6G139140_circ_g.5 Csa6G139140_circ_g.6 Csa6G139140_circ_g.7 Csa6G139140_circ_g.9 Csa6G139140_circ_g.10 Csa6G139140_circ_g.11
Support reads	NA
Tissues	leaf,root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Csa6G139140.1:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTCATCGATTTTGTGGCAACTTTCTTTGTCTCAACACAAACTTACGCTAAGGATGTTCGATCAC
AATTTTGTGGAAGGTCAATCCATTGCGCAGACACAGacactatgtaacgaaatgggtcctgtag
tctcattcaacttgaaacaaccagatggatcttgggttggacatcgagaagtggaaaaattggc
ctctttgt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 400
Transcript exons: 9783353-9783469,9785679-9785756,9785868-9785969,9788210-
9788312
ACACTATGTAACGAAATGGGTCCTGTAGTCTCATTCAACTTGAAACAACCAGATGGATCTTGGG
TTGGACATCGAGAAGTGGAAAAATTGGCCTCTTTGTCTGGGATTCAGTTAAGGACAGGATGTTT
TTGCAATCCTGGTGCATGTGCAAAATATCTTGGTCTAACTCATTCGGATCTTGCTACAAATATT
GAGGCAGGTCATGTCTGCTGGGATGATTGTGATATAATTAATGGAAAACCAACTGGTGCTGTGA
GAGTATCCTTGGGATACATGTCAACTTATGAAGATATCAAGAAATTCATCGATTTTGTGGCAAC
TTTCTTTGTCTCAACACAAACTTACGCTAAGGATGTTCGATCACAATTTTGTGGAAGGTCAATC
CATTGCGCAGACACAG
						
					

						Genomic sequence
						
							ACACTATGTAACGAAATGGGTCCTGTAGTCTCATTCAACTTGAAACAACCAGATGGATCTTGGG
TTGGACATCGAGAAGTGGAAAAATTGGCCTCTTTGTCTGGGATTCAGTTAAGGGTAAATCTTTT
TGTTTCTTGTTTTTTGCATCATACTGTTTAAATTTTATGTTTATAACTTCTATTTTAAATTATC
TCTAATTGATTCTTCTCATTTGATTTTATTCTTTTTGATTTCCTTCTGTGATAAAAATATGAAG
GTTGATACTTTATTCTTTATCATATTCAAGCTGATGTAGCCTAAAGGTTGAAGGAGCCCTAAAC
CCGATAAAAAATCCCAAATAAAATTGTCACCTCATGTTGCACTGCAACTAAAAAGATTGAAGGA
GCCCAATTAAAGAACTGTAAAGGATGACTATGACGTCATCAAATATTTTCTTTGGTTGTCAAGA
ACTACATACATTCCTGCCACCAAGATTCTGCTCAACCATTTTATCCAAAGTTGGAGTATCAAAG
CAACTCTCTTTGCTTGCTAAATGGGGTTGGAGATACTTGAAAGAAGAGTCAGCTCTTTGGAGAA
AAATAGTTAGAAGCATCCATGGTAAGGAGGTTTTTGCTTGGTTCACCAAAGAGAAATCCGGTAA
CAGCCTAAGAAGCCCTTGGGTCAGCATTGCTAGAGTTTGGAGGTTGGTTGACTCTGGTAACAGC
CAAAGAGCTGACTCTCCTTTCGAGTATCTCCAACCCCTATTCTGTTTCTAAGGTTTTAAAATGG
GTATTTTTGGTCCTTCAGGTTATTTGACCGTTGGTTGACTAACGGAAAGATGATGTGGCATGGT
TGAAGTAGCATCTTTTAAGTGATGTTACAAATTTTATTAATTTTATATTAATTAATTTTGATGT
GTCATTCTTACTTTCATTTTACTTTATATCTCTCCTTATCTCTCCTCCTTCATCTTCTGCTGCT
AGTTTTTTCTTTTCTTCACCATCTACAATCACAAGATCAATGGCTGCACTAGCAATCATCAAAC
TACAGGGCGGCAAATTCAAAAATTAGAATTTAGGACAAAACCCAAAACATTTGGGCAAGAAAGT
TGACACTCGCATACCAACGGAAGAAAAATATTTTACCCAATTTATATTTTGATGAGACGATGAC
CTATCCTTCAAAATCTCAACGATTTGCACAAACAAATTAAATTTCAAGAAGCTTAGTTTGAAAT
GGGAAAATGAGGTGGAGGATCTGGGATTTATGGATGTGGGGTTTGGGAGTGGGAAAGCGTTCGA
TGCCAATGGAGGAAATTAAGGTGCACCAAGCTTGGATTAGATGGGGAAACGGGTGTGGTTGGGG
GTGAGTAAACGGGGAAAATAACTTTCCCTAGTTTACTTGAGTGATACAGAAACTAAAGTGATTT
GTATTTTGTGAACAGGGGCAAAATATTTGTATGGACAGAATATTCCTTGCCCAAAGTTTTAGGC
TTTTGTCCCAAAAATATAAATTTTTCTGCTTTTCCTTCTTCGATCAAGTATTAGCTTGAAGATT
TGATGATTGTTAACTTGATACAGCCATTGATCTTGTGATTGTGGGTGGTAAAGAAAAGAAAGCA
GTATAAGCTGAGGAAGAAGGAGACAAGGAGAAATATAAAATAAAATGGAAAAAAAAGTGATAGC
ATCAAAATTATTAATATAAATTAATAAAACTTGTTTGAGTTATTATTAATAAAAAAATTTGTCC
CCGTTTCAAAAAGAAAAAATTTGTTACATCACTTAAAAGTTGCCACTTCAACCATGCCACATCA
TCTTTCCATTAGTTAACTGATGGTCAAATAACCTCAAGGACCATTTAAAATAAAATTTCAAATC
TCAAGGACCAAAAATACCCATTTTAGAACTTTAAGGACCAAATAGACACTTAAGTCCTTAGGGA
CTAAAAGTGTATTTTGCCCCAAAATCAAATACTTTATTTTGGATCAAAATTTGTGAATACAAGA
AGACAATTCCTCCATTTATAGAGTTGTAAAGCAAAATTAATCGTAATTTGAATTAATCAAATAA
TCTAATCCTAATCCTAATCCTAATAAACTAGTGAACTAATCATAATCGAAATCAGTCAAGAAAA
TCAATCCTAATCAGAATCAGTTAAAGATTTAACCAAGATATCCCAATTTACACTTATCCCACCA
TATCCCAATTTACACTTATACCACCATATCAATCCCTAGAAACTCACTTTTTACTCGGTGGAAA
ATTATCGTTTCAAATTTTTAGTGATAAGAAAATTGTACTAATGTCTTGTTTGCACTGACCATCT
CTTCATTATAATTTCTGTGTAGACAGGATGTTTTTGCAATCCTGGTGCATGTGCAAAATATCTT
GGTCTAACTCATTCGGATCTTGCTACAAATATTGAGGTAAATCTTTTTGTTCCTACTTCAATTT
GTGGGTCATAAAAGAATTTCCAAATTTCATTTTCCCTTCAACTCCAATTTCTAGGGTTCTCATT
AATTGGCTACTTGGTCCAGGCAGGTCATGTCTGCTGGGATGATTGTGATATAATTAATGGAAAA
CCAACTGGTGCTGTGAGAGTATCCTTGGGATACATGTCAACTTATGAAGATATCAAGGTAAATA
ATTTATTTTCCGTTCTATTAATTCTTTTGGTGATGTGGTAACTTGAAATAATATTATGTGGCCA
TGTGGGCTTGACGAATGAGAATAACTGAAATTTTATCATAGGTGATATGGAGGGGGTGTTTAAT
GAATTCTTTGAAAGATAAATTTTGAACAGTTCGTTAGTGGAGACCTTGATGTGTTTAATTCAAG
AAAAGGAAAATGCGAACAAGATTAAGGCGTTTAGGCCTATTAGTCTTAACACTAGTGTCTATAA
GATCTTGTTGATCGTTTAAGGAAAGTGTTGCGTTCTACAATTTCTGAGGTCTGAGGCGTCCTTT
TAGAGGGGAGACAAATCTTGGATCGAGCTCTTATAGCTGATGAAGCCATTGAGGAGTATAGGTT
GAAGAAAAAGGAAGTAGTGTTAAAACTCGATTTTGAGAAGGCGTATGACCATGTGGATTTGGAT
TTTTTTGGATAGAGTGATGATGAAGAAAGATTTTGGTTACAAGTCCAGAATGTGGATGTGGGGG
TGTGTTAGGAATGTGAAATATTCTATCTTCATCAATGGAACCCCAAAAGGGTCGATTCAAGCTA
CCAGGGGTTTAAGACAGGGGGACCCTTTTTCTCCTTTCTTGTTCTTAATTGTTTTGGATGTCTT
AAGTCGCCTCATTTTTAAGGGGGTGGGAAGGGCGTGTACTTTTGGGAGGATCAATGGGTGGGGG
AGAGATCCATTTGCTCTTTATTTGCACATCTTTATCTTTTATCCTCTTCTAAAAATTGTATGAT
CTCAGGTCTTTTAGTTAGGTTTGAGAATTCTGTCTTTTTCTTTCGGGTTCCGTTGCAATTTGAC
AAATAGGTAAACATTAGAGGTCACCTCGCTTCTTTCTCTGATTGAGAGGTGCAGTTTTAGAAAG
GGGAGAAAGGATGTTCATGCTTGGAGTCCTAATTCGAGTCAGTGTTATATGTGTAAATCGTTGT
TCAGTTTGTTGTTGGACCCATCCCCTTCTAGGGAGTCAGTTTTTGTTGTGGTTTGGAGGATTAA
GGTTTTCAAGAAAGTGAGGTTCTTTATCTGGCCAAGGCAGGGTTAATATTGTTGATAGGCTTGT
TAGGAGGACCTTGGTTGTAGGGCCTTGTTGTTGTTTGCTTTGTTGGAAGGCAGAGAAAAGCCTT
GATCATCTTTTTTGGGATTGCCAGTATGTTTGAGCTATGTGGAGTTATTTTTTGCAGGAGTTTG
GAGTCAACTATGTTGGATATTGGAGCATTTGTGCAATGATTGAGGAGTTCGTCCTCCATCTGCC
TTTAAGAGAGAGAGTGTTTTTTTGTTGCTTGTTGGGGTGTGTGTTATTATTTGGGATGTTTGGG
GAGAGAAGAACAATCAGGTTTTTTGTGGTAGGGTAAGGGATCTTAGTGAGGTTTGGTTTTTGGC
TAGATTCTGCATGTCCATGTGGGCTTCGATTTTGAAGACTTTTTGTAACTATTCCCTCTATAAC
ATTTAACTTAGTTGGACCCCCTTCTTGTAATTGGGGTGTTTATGTTTGCTCTCGTATTCTTTCA
TCTTATTCTCAATGAAAGTTGTTGATTCTATCAAAAAATAATATCGTGATCTACTGGACTCATT
TTTTGGCTTAAGGAGTGCTTAATGATTATTACAACAAAAGAAATGGGATGACGTCATTGTTTCG
ATATGGTCAACAGGAACGCTCATGGAAAGGAGATGAGGTGGTTGGACAGTTTTGTTTCGGCATC
TCGTAAGGCTTCAGCTTGGTGCTACCTTAATATAGAATTCAAAGCTTTTAGCATTCAGGAGATC
AGCTTAAATAGGAGGGCTTTTATTTTTTAAATTGCTAGTTTTTCCTGTAGTTGTTTTGTTCTGG
GCTGATCCTATTTTCTTAGGACTCTTCGTATGGGGTGGGGACGGATTTGGCCTATATTTTGATT
GTTTGTTTTGGTTTTGGTTATTCGAGAAGATGACGATGGCACTAAGGACGTGCCAACCTAGTTG
AGATTTCTCTTGTACTTTTAGTATTAGTCTCATTTTTATTAACAAATTTTTTAGACTCGTCTCC
TTTTTCAAAAAAAAAAAAAAAAAACACTGAGGGCACATAATTTGGATGGCTCCCTATGTCTCTT
GGATGTTCCTATAGAAAGCTGTCTTACAGCAGAAATTCATGCAATTAATTTAAGTACAAAGCAG
TTTCTCAATTTTGACAACAGTGTAGATGTTCTCATACAAAGCTCTATCTTATCGCAGAAATTCA
TCGATTTTGTGGCAACTTTCTTTGTCTCAACACAAACTTACGCTAAGGATGTTCGATCACAATT
TTGTGGAAGGTCAATCCATTGCGCAGACACAG
						
					

			
		

Sequences
Splice junction sequence	TTCATCGATTTTGTGGCAACTTTCTTTGTCTCAACACAAACTTACGCTAAGGATGTTCGATCAC AATTTTGTGGAAGGTCAATCCATTGCGCAGACACAGacactatgtaacgaaatgggtcctgtag tctcattcaacttgaaacaaccagatggatcttgggttggacatcgagaagtggaaaaattggc ctctttgt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 400 Transcript exons: 9783353-9783469,9785679-9785756,9785868-9785969,9788210- 9788312 ACACTATGTAACGAAATGGGTCCTGTAGTCTCATTCAACTTGAAACAACCAGATGGATCTTGGG TTGGACATCGAGAAGTGGAAAAATTGGCCTCTTTGTCTGGGATTCAGTTAAGGACAGGATGTTT TTGCAATCCTGGTGCATGTGCAAAATATCTTGGTCTAACTCATTCGGATCTTGCTACAAATATT GAGGCAGGTCATGTCTGCTGGGATGATTGTGATATAATTAATGGAAAACCAACTGGTGCTGTGA GAGTATCCTTGGGATACATGTCAACTTATGAAGATATCAAGAAATTCATCGATTTTGTGGCAAC TTTCTTTGTCTCAACACAAACTTACGCTAAGGATGTTCGATCACAATTTTGTGGAAGGTCAATC CATTGCGCAGACACAG
Genomic sequence	ACACTATGTAACGAAATGGGTCCTGTAGTCTCATTCAACTTGAAACAACCAGATGGATCTTGGG TTGGACATCGAGAAGTGGAAAAATTGGCCTCTTTGTCTGGGATTCAGTTAAGGGTAAATCTTTT TGTTTCTTGTTTTTTGCATCATACTGTTTAAATTTTATGTTTATAACTTCTATTTTAAATTATC TCTAATTGATTCTTCTCATTTGATTTTATTCTTTTTGATTTCCTTCTGTGATAAAAATATGAAG GTTGATACTTTATTCTTTATCATATTCAAGCTGATGTAGCCTAAAGGTTGAAGGAGCCCTAAAC CCGATAAAAAATCCCAAATAAAATTGTCACCTCATGTTGCACTGCAACTAAAAAGATTGAAGGA GCCCAATTAAAGAACTGTAAAGGATGACTATGACGTCATCAAATATTTTCTTTGGTTGTCAAGA ACTACATACATTCCTGCCACCAAGATTCTGCTCAACCATTTTATCCAAAGTTGGAGTATCAAAG CAACTCTCTTTGCTTGCTAAATGGGGTTGGAGATACTTGAAAGAAGAGTCAGCTCTTTGGAGAA AAATAGTTAGAAGCATCCATGGTAAGGAGGTTTTTGCTTGGTTCACCAAAGAGAAATCCGGTAA CAGCCTAAGAAGCCCTTGGGTCAGCATTGCTAGAGTTTGGAGGTTGGTTGACTCTGGTAACAGC CAAAGAGCTGACTCTCCTTTCGAGTATCTCCAACCCCTATTCTGTTTCTAAGGTTTTAAAATGG GTATTTTTGGTCCTTCAGGTTATTTGACCGTTGGTTGACTAACGGAAAGATGATGTGGCATGGT TGAAGTAGCATCTTTTAAGTGATGTTACAAATTTTATTAATTTTATATTAATTAATTTTGATGT GTCATTCTTACTTTCATTTTACTTTATATCTCTCCTTATCTCTCCTCCTTCATCTTCTGCTGCT AGTTTTTTCTTTTCTTCACCATCTACAATCACAAGATCAATGGCTGCACTAGCAATCATCAAAC TACAGGGCGGCAAATTCAAAAATTAGAATTTAGGACAAAACCCAAAACATTTGGGCAAGAAAGT TGACACTCGCATACCAACGGAAGAAAAATATTTTACCCAATTTATATTTTGATGAGACGATGAC CTATCCTTCAAAATCTCAACGATTTGCACAAACAAATTAAATTTCAAGAAGCTTAGTTTGAAAT GGGAAAATGAGGTGGAGGATCTGGGATTTATGGATGTGGGGTTTGGGAGTGGGAAAGCGTTCGA TGCCAATGGAGGAAATTAAGGTGCACCAAGCTTGGATTAGATGGGGAAACGGGTGTGGTTGGGG GTGAGTAAACGGGGAAAATAACTTTCCCTAGTTTACTTGAGTGATACAGAAACTAAAGTGATTT GTATTTTGTGAACAGGGGCAAAATATTTGTATGGACAGAATATTCCTTGCCCAAAGTTTTAGGC TTTTGTCCCAAAAATATAAATTTTTCTGCTTTTCCTTCTTCGATCAAGTATTAGCTTGAAGATT TGATGATTGTTAACTTGATACAGCCATTGATCTTGTGATTGTGGGTGGTAAAGAAAAGAAAGCA GTATAAGCTGAGGAAGAAGGAGACAAGGAGAAATATAAAATAAAATGGAAAAAAAAGTGATAGC ATCAAAATTATTAATATAAATTAATAAAACTTGTTTGAGTTATTATTAATAAAAAAATTTGTCC CCGTTTCAAAAAGAAAAAATTTGTTACATCACTTAAAAGTTGCCACTTCAACCATGCCACATCA TCTTTCCATTAGTTAACTGATGGTCAAATAACCTCAAGGACCATTTAAAATAAAATTTCAAATC TCAAGGACCAAAAATACCCATTTTAGAACTTTAAGGACCAAATAGACACTTAAGTCCTTAGGGA CTAAAAGTGTATTTTGCCCCAAAATCAAATACTTTATTTTGGATCAAAATTTGTGAATACAAGA AGACAATTCCTCCATTTATAGAGTTGTAAAGCAAAATTAATCGTAATTTGAATTAATCAAATAA TCTAATCCTAATCCTAATCCTAATAAACTAGTGAACTAATCATAATCGAAATCAGTCAAGAAAA TCAATCCTAATCAGAATCAGTTAAAGATTTAACCAAGATATCCCAATTTACACTTATCCCACCA TATCCCAATTTACACTTATACCACCATATCAATCCCTAGAAACTCACTTTTTACTCGGTGGAAA ATTATCGTTTCAAATTTTTAGTGATAAGAAAATTGTACTAATGTCTTGTTTGCACTGACCATCT CTTCATTATAATTTCTGTGTAGACAGGATGTTTTTGCAATCCTGGTGCATGTGCAAAATATCTT GGTCTAACTCATTCGGATCTTGCTACAAATATTGAGGTAAATCTTTTTGTTCCTACTTCAATTT GTGGGTCATAAAAGAATTTCCAAATTTCATTTTCCCTTCAACTCCAATTTCTAGGGTTCTCATT AATTGGCTACTTGGTCCAGGCAGGTCATGTCTGCTGGGATGATTGTGATATAATTAATGGAAAA CCAACTGGTGCTGTGAGAGTATCCTTGGGATACATGTCAACTTATGAAGATATCAAGGTAAATA ATTTATTTTCCGTTCTATTAATTCTTTTGGTGATGTGGTAACTTGAAATAATATTATGTGGCCA TGTGGGCTTGACGAATGAGAATAACTGAAATTTTATCATAGGTGATATGGAGGGGGTGTTTAAT GAATTCTTTGAAAGATAAATTTTGAACAGTTCGTTAGTGGAGACCTTGATGTGTTTAATTCAAG AAAAGGAAAATGCGAACAAGATTAAGGCGTTTAGGCCTATTAGTCTTAACACTAGTGTCTATAA GATCTTGTTGATCGTTTAAGGAAAGTGTTGCGTTCTACAATTTCTGAGGTCTGAGGCGTCCTTT TAGAGGGGAGACAAATCTTGGATCGAGCTCTTATAGCTGATGAAGCCATTGAGGAGTATAGGTT GAAGAAAAAGGAAGTAGTGTTAAAACTCGATTTTGAGAAGGCGTATGACCATGTGGATTTGGAT TTTTTTGGATAGAGTGATGATGAAGAAAGATTTTGGTTACAAGTCCAGAATGTGGATGTGGGGG TGTGTTAGGAATGTGAAATATTCTATCTTCATCAATGGAACCCCAAAAGGGTCGATTCAAGCTA CCAGGGGTTTAAGACAGGGGGACCCTTTTTCTCCTTTCTTGTTCTTAATTGTTTTGGATGTCTT AAGTCGCCTCATTTTTAAGGGGGTGGGAAGGGCGTGTACTTTTGGGAGGATCAATGGGTGGGGG AGAGATCCATTTGCTCTTTATTTGCACATCTTTATCTTTTATCCTCTTCTAAAAATTGTATGAT CTCAGGTCTTTTAGTTAGGTTTGAGAATTCTGTCTTTTTCTTTCGGGTTCCGTTGCAATTTGAC AAATAGGTAAACATTAGAGGTCACCTCGCTTCTTTCTCTGATTGAGAGGTGCAGTTTTAGAAAG GGGAGAAAGGATGTTCATGCTTGGAGTCCTAATTCGAGTCAGTGTTATATGTGTAAATCGTTGT TCAGTTTGTTGTTGGACCCATCCCCTTCTAGGGAGTCAGTTTTTGTTGTGGTTTGGAGGATTAA GGTTTTCAAGAAAGTGAGGTTCTTTATCTGGCCAAGGCAGGGTTAATATTGTTGATAGGCTTGT TAGGAGGACCTTGGTTGTAGGGCCTTGTTGTTGTTTGCTTTGTTGGAAGGCAGAGAAAAGCCTT GATCATCTTTTTTGGGATTGCCAGTATGTTTGAGCTATGTGGAGTTATTTTTTGCAGGAGTTTG GAGTCAACTATGTTGGATATTGGAGCATTTGTGCAATGATTGAGGAGTTCGTCCTCCATCTGCC TTTAAGAGAGAGAGTGTTTTTTTGTTGCTTGTTGGGGTGTGTGTTATTATTTGGGATGTTTGGG GAGAGAAGAACAATCAGGTTTTTTGTGGTAGGGTAAGGGATCTTAGTGAGGTTTGGTTTTTGGC TAGATTCTGCATGTCCATGTGGGCTTCGATTTTGAAGACTTTTTGTAACTATTCCCTCTATAAC ATTTAACTTAGTTGGACCCCCTTCTTGTAATTGGGGTGTTTATGTTTGCTCTCGTATTCTTTCA TCTTATTCTCAATGAAAGTTGTTGATTCTATCAAAAAATAATATCGTGATCTACTGGACTCATT TTTTGGCTTAAGGAGTGCTTAATGATTATTACAACAAAAGAAATGGGATGACGTCATTGTTTCG ATATGGTCAACAGGAACGCTCATGGAAAGGAGATGAGGTGGTTGGACAGTTTTGTTTCGGCATC TCGTAAGGCTTCAGCTTGGTGCTACCTTAATATAGAATTCAAAGCTTTTAGCATTCAGGAGATC AGCTTAAATAGGAGGGCTTTTATTTTTTAAATTGCTAGTTTTTCCTGTAGTTGTTTTGTTCTGG GCTGATCCTATTTTCTTAGGACTCTTCGTATGGGGTGGGGACGGATTTGGCCTATATTTTGATT GTTTGTTTTGGTTTTGGTTATTCGAGAAGATGACGATGGCACTAAGGACGTGCCAACCTAGTTG AGATTTCTCTTGTACTTTTAGTATTAGTCTCATTTTTATTAACAAATTTTTTAGACTCGTCTCC TTTTTCAAAAAAAAAAAAAAAAAACACTGAGGGCACATAATTTGGATGGCTCCCTATGTCTCTT GGATGTTCCTATAGAAAGCTGTCTTACAGCAGAAATTCATGCAATTAATTTAAGTACAAAGCAG TTTCTCAATTTTGACAACAGTGTAGATGTTCTCATACAAAGCTCTATCTTATCGCAGAAATTCA TCGATTTTGTGGCAACTTTCTTTGTCTCAACACAAACTTACGCTAAGGATGTTCGATCACAATT TTGTGGAAGGTCAATCCATTGCGCAGACACAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.969736584

Conservation Information
Conserved circRNAs	NA
PMCS	0.969736584

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							9783369-9783360(+)
9785957-9783360(+)
						
						Potential amino acid sequence
						
							MGPVVSFNLKQPDGSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLTHSDLATNIEAGHV
CWDDCDIINGKPTGAVRVSLGYMSTYEDIKKFIDFVATFFVSTQTYAKDVRSQFCGRSIHCADT
DTM*
MKISRNSSILWQLSLSQHKLTLRMFDHNFVEGQSIAQTQTLCNEMGPVVSFNLKQPDGSWVGHR
EVEKLASLSGIQLRTGCFCNPGACAKYLGLTHSDLATNIEAGHVCWDDCDIINGKPTGAVRVSL
GYMSTYEDIKKFIDFVATFFVSTQTYAKDVRSQFCGRSIHCADTDTM*
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	9783369-9783360(+) 9785957-9783360(+)
Potential amino acid sequence	MGPVVSFNLKQPDGSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLTHSDLATNIEAGHV CWDDCDIINGKPTGAVRVSLGYMSTYEDIKKFIDFVATFFVSTQTYAKDVRSQFCGRSIHCADT DTM* MKISRNSSILWQLSLSQHKLTLRMFDHNFVEGQSIAQTQTLCNEMGPVVSFNLKQPDGSWVGHR EVEKLASLSGIQLRTGCFCNPGACAKYLGLTHSDLATNIEAGHVCWDDCDIINGKPTGAVRVSL GYMSTYEDIKKFIDFVATFFVSTQTYAKDVRSQFCGRSIHCADTDTM*
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhu et al., 2019;He et al., 2020

circRNA

Detail information of Csa6G139140_circ_g.8

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