Detailed infomation of each circRNA
General Information | |
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CircRNA Name | BGIOSGA027214_circ_g.5 |
ID in PlantcircBase | osi_circ_017758 |
Alias | Chr08:13192872_13197780(MH63RS2), Chr08:13192872_13197780(MH63RS2) |
Organism | Oryza sativa ssp. indica |
Position | chr8: 14187547-14192461 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | ei-circRNA |
Identification method | CIRI2, CIRCexplorer2, CIRI2, CIRCexplorer2 |
Parent gene | BGIOSGA027214 |
Parent gene annotation | NA |
Parent gene strand | - |
Alternative splicing | BGIOSGA027208_circ_igg.1 BGIOSGA027232_circ_ag.1 BGIOSGA027223_circ_ig.1 BGIOSGA027223_circ_ig.2 BGIOSGA027223_circ_ig.3 BGIOSGA028425_circ_g.1 BGIOSGA028425_circ_g.2 BGIOSGA028425_circ_g.3 BGIOSGA028425_circ_igg.1 BGIOSGA027218_circ_g.1 BGIOSGA027218_circ_g.2 BGIOSGA028430_circ_igg.1 BGIOSGA028430_circ_igg.2 BGIOSGA027214_circ_g.1 BGIOSGA027214_circ_g.2 BGIOSGA027214_circ_g.3 BGIOSGA027214_circ_g.4 BGIOSGA027214_circ_g.6 BGIOSGA027214_circ_g.7 |
Support reads | NA |
Tissues | root, leaf, panicle |
Exon boundary | No-Yes |
Splicing signals | CT-AA |
Number of exons covered | BGIOSGA027214-TA:6 |
Conservation Information | |
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Conserved circRNAs | osa_circ_036654 |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhou et al., 2021 |