Plant Circular RNA Database

Detail information of Os12g0297500_circ_g.7

			
						 General Information
					
						CircRNA Name
						Os12g0297500_circ_g.7
					
						ID in PlantcircBase
						osa_circ_011258
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr12: 11734617-11739208  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os12g0297500						
					
						Parent gene annotation
						
							Pyruvate phosphate dikinase, PEP/pyruvate-binding domain contain
ing protein. (Os12t0297500-01);Similar to Phosphoglucan, water d
ikinase, chloroplastic. (Os12t0297500-02)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os12g0297500_circ_g.4 Os12g0297500_circ_g.5 Os12g0297500_circ_g.6 Os12g0297500_circ_g.8 Os12g0297500_circ_g.9 Os12g0297500_circ_g.10 						
					
						Support reads
						1
					
						Tissues
						shoot
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os12t0297500-01:7

General Information
CircRNA Name	Os12g0297500_circ_g.7
ID in PlantcircBase	osa_circ_011258
Alias	NA
Organism	Oryza sativa
Position	chr12: 11734617-11739208 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os12g0297500
Parent gene annotation	Pyruvate phosphate dikinase, PEP/pyruvate-binding domain contain ing protein. (Os12t0297500-01);Similar to Phosphoglucan, water d ikinase, chloroplastic. (Os12t0297500-02)
Parent gene strand	-
Alternative splicing	Os12g0297500_circ_g.4 Os12g0297500_circ_g.5 Os12g0297500_circ_g.6 Os12g0297500_circ_g.8 Os12g0297500_circ_g.9 Os12g0297500_circ_g.10
Support reads	1
Tissues	shoot
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os12t0297500-01:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GGTGAGCAATATCACGAATTCGTGTTAGAGGGACAGAGGCTGTAAACTCTGACTTAAATGAAGG
TAAAAAGGGATGAATTTTGCGAATCACGAGAACATCcattactttttcagggaatatagaaaga
agtgcttcagagtactcttccgttaatctccgtgctctgtccagtgtagctttaagtcttagtg
accaaata

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CATTACTTTTTCAGGGAATATAGAAAGAAGTGCTTCAGAGTACTCTTCCGTTAATCTCCGTGCT
CTGTCCAGTGTAGCTTTAAGTCTTAGTGACCAAATATATTTCCCATCTTCACAACCTTCACACA
TGACAAGAAACAGTCAGGGTATTTCTGAGTCTTGACTACAATAAAGGTATTTAGGCATGGGCAT
ATAAAATAGATAGATATTAAAGAAGAAACAGCACCTTCACTTTCAGATAGACCTTTTTGCTTCC
AGGAAAGAATCTCATTCCCTATGGCAATACATTCATCTGTTTTCCAACCTGAAAAGCTAACTTG
ATTGATGCCAATGACAAGGGCATCAAGAGTAGTATCCCATAGAGTAGTATTTCTAGCTACATCC
TTTGCAAGTGAAGCTGATCCACCTAAGGCTTCAAGAGTATTGATGAATCTGTTATAGTACCAGA
GCAAAGTACATAAGCTCACTGATACCGCCAAGAGTAATATAAGTTTGCCTAGCTACGATTTTAT
TTTGAAGCTATAAATGATAACATAGAGTCATGGAGTGAATTAACCTATAAATCATAACAAATAA
GTCAGCAAAAATTGATACCATTTTAATCAATGCAATGCATTAGCATTATTTGGAAAAACAGACT
GCAAAGTCTATCTTTTCACTAAAGCACAAAGGAAATTAGTTCACTGTTGCAAAAGTCGAACAAG
TGAAATACACTGTTCTTCTCACTTCACACACACACACACACAAGTAGGTGATGGACTGAAGGTG
TTTTCAGTTTGCTACAATAGCTACTTCTGCTAGCTTGCATTACTACCAATTATAGAGAACATGT
TTCAGTCGATTCTGCTCCAAAACCAACATATACTACAGCTGCTTGCAATCTCTGCAGGTCTCTG
ATTACTACTGATCCTAGAGCAGGAAAACTCTATCCTGACTTCTATCTTGTCAAAGGAAACTTAT
TAGCCCAGCAGCCTACAAACATTTCTAGTGTTCAGACATCAGTTGTTATGGGTTAGGGTTCATA
GGGGTAAACACCGCCGGGAGGATGGTGACGGCTGCTAGGGATGAGAGAGGGACTTAGGTTGGGA
GAGACTGATTCATCGCTTAATCCAAAATTCCAAATGACGATACAATCCATCCTTATATAGATGG
ATAAGATGGAGGGAAAGACCCAGTCTAATCCTATCCAACCAACTCTATCCAACTGAGCTACCAT
AGGATGATGGAACTGATCCCTAGGGCCTCAACCCATCGGCTCACTAGGACCTCCACCTCTCGGC
CCACTACCTATGACAACAGTTGCCTACAATCTATTGTTTGTACACATGAGTAAGCTGCTGGTTT
TATTTAACAAATTTGATGCCTAAGCATTAGATTCACCTAACAATTATGACTCTGCATGCCCTCG
AATAGATCAATATCCACTCTATATATGCACATAGATAATATGGCTTCACTAAAGATGACTACAT
CACATGAGAGTGCAACCTCTACATTCACTTTTTATCCATATTCGTCAGTATTTTCCTTTAATAT
TTGTATTCAACAAGACTCCACACCACATGATATAGATAAGCTTGAAACAGGGGTCAAAAAGAGG
TAGGGCACTCGTCCACATCTATCCAATGACTTTTTCCTATCATGATAGAGAGGCTTCAAGCAAT
TCTTGGTTTCTCATTGCAGAATTCTAGTGGTAAATTAGTTGATCTTATTGGGATAACTCAAACT
AATACAGTAACCATACAACGTTTCTATCAAACCCCTAGCAATTTGTTTACTTAATCCAATATGG
TCCTTCTGGATCAAAAAGAGAAATCTAGTATGCAATCAAATTTATGTTCTGACATAATCAAGAA
AAAATTGCAATTCATGCAGCCATCAGTTTTCACCAGAGCAGCCCCCACTTCATATATACCCAAA
GTAAATACTTTATTTAAAGATTGATTATGGCATGTTAGTGTCAATAAATTTTCGATTGCCCACT
AGTTTGGAAAGGTATGTGCTTTTTTAGAGAGCACTGATGCATTTTACAAGTGCATACAAACTAA
TCAACAAAGAACATAAAATCTCAAAAAGTGACGACTATTGACTAGTAAGACAAATGAAGGGCGA
AACTAACATTTCAGAATGGAAAGAAAAGGCAATTCAAAAGTACAATTTCATAAGGTTTGTGAGA
AAGCACCAATTAAAATCACTTAGTTGAAACTAGGACAGTTACCTGCTTAACAGAACAAATGAAT
AATCCTCAAGACTAATTTCACAAAGGCGCCACTGCAAAACGTAATCAAGTATCGCTTGTGATAT
ATGCAGCCAATTTCAACCACTTATCAATTATGTTAGACAAGATAACCTTTTGTCGCATTGCTAT
AGCATTATCAGGCGCATCATTTCTAAGGCCACTTTCAAGGCCCTTCATTAGAACCGATCTTAGA
GAAGATAATGATTGCAAGGTAGTCATCAAAATTTGAATGGTATCATTTTTATCCAAATCTTCTG
CATGATCCACTTGGTCCAAACTCTGAAAAGGAAGATAAACACGAAAGGAATATGAGTTAGGCAT
GACAATGATAAGCAATGATGCCAGACCAGTACTACTTGTTCCTCTATTGAAATACCAGAAAGTA
ACAAATGTCGGTATCAACTGTCAAAACATAGAAATAACAAGGACATAGTGCAATGCAAGGTGAC
ATAAATTCGTATTTATAAGTTTATTTGATTATGTTATGTTAGGTAACCAGAGCACAGAAGTGTC
TGATTGAGAGTGATCCCTGGTAGAGCATTATCCGCAACTCCAATGCAAAGGAAATAAGGAGATA
ATTAATTGATGATCATACATATAAAGAAAAATTAACTGGTTTCAGCAAAGTTTACCCTTTTGGT
TTCCACAAAGGATGAGAGAACTTCTAAGCCTGACTCGTTCAGAGATTCCTTGATGGACTCCAGT
TGCTCAAATAGGCTGTGAAATCGGTAATCAGGTTAGACAATTTATATTTACATGGACACTATAT
GACCAACAGGCATTTGAATATCTAACACACTAAACATCTGCTTTTTTTCAATTTTGTTTTATAA
ATTTATTTTGTAGTAATCTGTTATTACTTCTTAAGGTTTGATTGCAGGTTAGCAGTACATGGCA
ACTTTTTTTTTTTATTCTAGTGTACATCTAAAAGGGCAGCCACATAGGCATTAGGCAGCACACG
GCCTCCTAAGCATGTCTGTTGCCTGACTAGAACTTAGAAGTTCTAACCCTGGTGAACAATTACA
TGAAACCCAGAATTGACAATATAAATTGAAAGTTTAATTCCTTATTTCATTCCATGTCACTGCG
TTGAAGTTGAATGCATTATAAGGCTCGTTCAGAACTACAAATTCCCATCTTCTACTCCCTTGTT
TTACGAGTGCACGCTTCCCGAACTACTAAACGGTGCATTTTTTTCCAGAAAATTTCTATAGGAA
AGTTGTTTTAAAAAAATCATATTAATTCATTCTTCAAGTTTTTTTAGCTAATACTTAATTAACC
ATGCACTAATGAGCTACCTCGTTTTCCATGCGGGATGAATGAGTTACAAATCCTCAGGTTCGAA
CACAGCCTAAGGGTGTGTTCTTTTATCCCCTTTCTCAACTTCTACTCCCTCGTTTTACGCACGC
TTCCAAATTACTAAATGGTGTGTTTTCTACAAAAAAAATTCTATATAAAAGTTGCTTTAAAAAA
TCACATTAATCTATTTTTCAATTTTTTTAGCTAATACTTAATTAATAATGTGCTAATCCACCGC
TCTGTTTTGTGTGCCAGAGGGGAAGGCCGGAAGGGTTCCCAACCCTTCCAAAAGAACACAGCCT
TACCTTCACTGGTGCCCTGAATAAATATATTAAATTCTTAATACCAGCATTATTGCAAGAAATA
TGTGCATATACTAGCAGCACCAGTCTGGTGTTTTTCACAAGTTAAGACCTTGATTTATCTTTCT
TTGTGTGAATTCATGGGTCGATGGGGGACTACCATCTGTCTATCTCTATCACCGTAAAATTACC
ACTGCTTCTAGTTATAAGTAGTCATGAATTGGAAAGCTATAACTGGCATAAGGATGTTTTAGTA
CACAGTAGGATAGATAAGTTCAAAAAGAGAGTGACAATTTTGTTAGCTTTTTCAGCAAACAGAA
AACTTATATCTATGGAAGTAGGAAAATGGAAAATTGTAAATTAGATAACCTGCCAGCATTGAAG
AAATCTTTTAGTTCGCTATAAAATATCGTGAATTGTTCAACAAATGTTTCACTGTATTCTCCAG
GGGTCTTAGTAATCCTAGCAAGCATGACTTCTGTAGCAATAAGATCCTCAGGTCCAGCATTACG
ATGAAGTTTGTTTTGTATAGTATGCTTGATTTCTTGCTGTCGACATGAAAAGATCAAACTAAGT
AAAGTAATCCAATGAAGAGATTGTTCAAAACTGCAGAAAGGGATCACCACCTTGAGATCATGTG
GGATGTCATTCCGGTGAGCAATATCACGAATTCGTGTTAGAGGGACAGAGGCTGTAAACTCTGA
CTTAAATGAAGGTAAAAAGGGATGAATTTTGCGAATCACGAGAACATC
						
					

			
		

Sequences
Splice junction sequence	GGTGAGCAATATCACGAATTCGTGTTAGAGGGACAGAGGCTGTAAACTCTGACTTAAATGAAGG TAAAAAGGGATGAATTTTGCGAATCACGAGAACATCcattactttttcagggaatatagaaaga agtgcttcagagtactcttccgttaatctccgtgctctgtccagtgtagctttaagtcttagtg accaaata
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CATTACTTTTTCAGGGAATATAGAAAGAAGTGCTTCAGAGTACTCTTCCGTTAATCTCCGTGCT CTGTCCAGTGTAGCTTTAAGTCTTAGTGACCAAATATATTTCCCATCTTCACAACCTTCACACA TGACAAGAAACAGTCAGGGTATTTCTGAGTCTTGACTACAATAAAGGTATTTAGGCATGGGCAT ATAAAATAGATAGATATTAAAGAAGAAACAGCACCTTCACTTTCAGATAGACCTTTTTGCTTCC AGGAAAGAATCTCATTCCCTATGGCAATACATTCATCTGTTTTCCAACCTGAAAAGCTAACTTG ATTGATGCCAATGACAAGGGCATCAAGAGTAGTATCCCATAGAGTAGTATTTCTAGCTACATCC TTTGCAAGTGAAGCTGATCCACCTAAGGCTTCAAGAGTATTGATGAATCTGTTATAGTACCAGA GCAAAGTACATAAGCTCACTGATACCGCCAAGAGTAATATAAGTTTGCCTAGCTACGATTTTAT TTTGAAGCTATAAATGATAACATAGAGTCATGGAGTGAATTAACCTATAAATCATAACAAATAA GTCAGCAAAAATTGATACCATTTTAATCAATGCAATGCATTAGCATTATTTGGAAAAACAGACT GCAAAGTCTATCTTTTCACTAAAGCACAAAGGAAATTAGTTCACTGTTGCAAAAGTCGAACAAG TGAAATACACTGTTCTTCTCACTTCACACACACACACACACAAGTAGGTGATGGACTGAAGGTG TTTTCAGTTTGCTACAATAGCTACTTCTGCTAGCTTGCATTACTACCAATTATAGAGAACATGT TTCAGTCGATTCTGCTCCAAAACCAACATATACTACAGCTGCTTGCAATCTCTGCAGGTCTCTG ATTACTACTGATCCTAGAGCAGGAAAACTCTATCCTGACTTCTATCTTGTCAAAGGAAACTTAT TAGCCCAGCAGCCTACAAACATTTCTAGTGTTCAGACATCAGTTGTTATGGGTTAGGGTTCATA GGGGTAAACACCGCCGGGAGGATGGTGACGGCTGCTAGGGATGAGAGAGGGACTTAGGTTGGGA GAGACTGATTCATCGCTTAATCCAAAATTCCAAATGACGATACAATCCATCCTTATATAGATGG ATAAGATGGAGGGAAAGACCCAGTCTAATCCTATCCAACCAACTCTATCCAACTGAGCTACCAT AGGATGATGGAACTGATCCCTAGGGCCTCAACCCATCGGCTCACTAGGACCTCCACCTCTCGGC CCACTACCTATGACAACAGTTGCCTACAATCTATTGTTTGTACACATGAGTAAGCTGCTGGTTT TATTTAACAAATTTGATGCCTAAGCATTAGATTCACCTAACAATTATGACTCTGCATGCCCTCG AATAGATCAATATCCACTCTATATATGCACATAGATAATATGGCTTCACTAAAGATGACTACAT CACATGAGAGTGCAACCTCTACATTCACTTTTTATCCATATTCGTCAGTATTTTCCTTTAATAT TTGTATTCAACAAGACTCCACACCACATGATATAGATAAGCTTGAAACAGGGGTCAAAAAGAGG TAGGGCACTCGTCCACATCTATCCAATGACTTTTTCCTATCATGATAGAGAGGCTTCAAGCAAT TCTTGGTTTCTCATTGCAGAATTCTAGTGGTAAATTAGTTGATCTTATTGGGATAACTCAAACT AATACAGTAACCATACAACGTTTCTATCAAACCCCTAGCAATTTGTTTACTTAATCCAATATGG TCCTTCTGGATCAAAAAGAGAAATCTAGTATGCAATCAAATTTATGTTCTGACATAATCAAGAA AAAATTGCAATTCATGCAGCCATCAGTTTTCACCAGAGCAGCCCCCACTTCATATATACCCAAA GTAAATACTTTATTTAAAGATTGATTATGGCATGTTAGTGTCAATAAATTTTCGATTGCCCACT AGTTTGGAAAGGTATGTGCTTTTTTAGAGAGCACTGATGCATTTTACAAGTGCATACAAACTAA TCAACAAAGAACATAAAATCTCAAAAAGTGACGACTATTGACTAGTAAGACAAATGAAGGGCGA AACTAACATTTCAGAATGGAAAGAAAAGGCAATTCAAAAGTACAATTTCATAAGGTTTGTGAGA AAGCACCAATTAAAATCACTTAGTTGAAACTAGGACAGTTACCTGCTTAACAGAACAAATGAAT AATCCTCAAGACTAATTTCACAAAGGCGCCACTGCAAAACGTAATCAAGTATCGCTTGTGATAT ATGCAGCCAATTTCAACCACTTATCAATTATGTTAGACAAGATAACCTTTTGTCGCATTGCTAT AGCATTATCAGGCGCATCATTTCTAAGGCCACTTTCAAGGCCCTTCATTAGAACCGATCTTAGA GAAGATAATGATTGCAAGGTAGTCATCAAAATTTGAATGGTATCATTTTTATCCAAATCTTCTG CATGATCCACTTGGTCCAAACTCTGAAAAGGAAGATAAACACGAAAGGAATATGAGTTAGGCAT GACAATGATAAGCAATGATGCCAGACCAGTACTACTTGTTCCTCTATTGAAATACCAGAAAGTA ACAAATGTCGGTATCAACTGTCAAAACATAGAAATAACAAGGACATAGTGCAATGCAAGGTGAC ATAAATTCGTATTTATAAGTTTATTTGATTATGTTATGTTAGGTAACCAGAGCACAGAAGTGTC TGATTGAGAGTGATCCCTGGTAGAGCATTATCCGCAACTCCAATGCAAAGGAAATAAGGAGATA ATTAATTGATGATCATACATATAAAGAAAAATTAACTGGTTTCAGCAAAGTTTACCCTTTTGGT TTCCACAAAGGATGAGAGAACTTCTAAGCCTGACTCGTTCAGAGATTCCTTGATGGACTCCAGT TGCTCAAATAGGCTGTGAAATCGGTAATCAGGTTAGACAATTTATATTTACATGGACACTATAT GACCAACAGGCATTTGAATATCTAACACACTAAACATCTGCTTTTTTTCAATTTTGTTTTATAA ATTTATTTTGTAGTAATCTGTTATTACTTCTTAAGGTTTGATTGCAGGTTAGCAGTACATGGCA ACTTTTTTTTTTTATTCTAGTGTACATCTAAAAGGGCAGCCACATAGGCATTAGGCAGCACACG GCCTCCTAAGCATGTCTGTTGCCTGACTAGAACTTAGAAGTTCTAACCCTGGTGAACAATTACA TGAAACCCAGAATTGACAATATAAATTGAAAGTTTAATTCCTTATTTCATTCCATGTCACTGCG TTGAAGTTGAATGCATTATAAGGCTCGTTCAGAACTACAAATTCCCATCTTCTACTCCCTTGTT TTACGAGTGCACGCTTCCCGAACTACTAAACGGTGCATTTTTTTCCAGAAAATTTCTATAGGAA AGTTGTTTTAAAAAAATCATATTAATTCATTCTTCAAGTTTTTTTAGCTAATACTTAATTAACC ATGCACTAATGAGCTACCTCGTTTTCCATGCGGGATGAATGAGTTACAAATCCTCAGGTTCGAA CACAGCCTAAGGGTGTGTTCTTTTATCCCCTTTCTCAACTTCTACTCCCTCGTTTTACGCACGC TTCCAAATTACTAAATGGTGTGTTTTCTACAAAAAAAATTCTATATAAAAGTTGCTTTAAAAAA TCACATTAATCTATTTTTCAATTTTTTTAGCTAATACTTAATTAATAATGTGCTAATCCACCGC TCTGTTTTGTGTGCCAGAGGGGAAGGCCGGAAGGGTTCCCAACCCTTCCAAAAGAACACAGCCT TACCTTCACTGGTGCCCTGAATAAATATATTAAATTCTTAATACCAGCATTATTGCAAGAAATA TGTGCATATACTAGCAGCACCAGTCTGGTGTTTTTCACAAGTTAAGACCTTGATTTATCTTTCT TTGTGTGAATTCATGGGTCGATGGGGGACTACCATCTGTCTATCTCTATCACCGTAAAATTACC ACTGCTTCTAGTTATAAGTAGTCATGAATTGGAAAGCTATAACTGGCATAAGGATGTTTTAGTA CACAGTAGGATAGATAAGTTCAAAAAGAGAGTGACAATTTTGTTAGCTTTTTCAGCAAACAGAA AACTTATATCTATGGAAGTAGGAAAATGGAAAATTGTAAATTAGATAACCTGCCAGCATTGAAG AAATCTTTTAGTTCGCTATAAAATATCGTGAATTGTTCAACAAATGTTTCACTGTATTCTCCAG GGGTCTTAGTAATCCTAGCAAGCATGACTTCTGTAGCAATAAGATCCTCAGGTCCAGCATTACG ATGAAGTTTGTTTTGTATAGTATGCTTGATTTCTTGCTGTCGACATGAAAAGATCAAACTAAGT AAAGTAATCCAATGAAGAGATTGTTCAAAACTGCAGAAAGGGATCACCACCTTGAGATCATGTG GGATGTCATTCCGGTGAGCAATATCACGAATTCGTGTTAGAGGGACAGAGGCTGTAAACTCTGA CTTAAATGAAGGTAAAAAGGGATGAATTTTGCGAATCACGAGAACATC

			
						 Conservation Information
					
						Conserved circRNAs
						
							zma_circ_010177 						
					
						PMCS
						0.222914102

Conservation Information
Conserved circRNAs	zma_circ_010177
PMCS	0.222914102

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							11739183-11734667(+)
11739167-11734636(+)
11738931-11734619(-)
						
					

						Potential amino acid sequence
						
							MNFANHENIHYFFREYRKKCFRVLFR*(+)
MKVKRDEFCESREHPLLFQGI*(+)
MLARITKTPGEYSETFVEQFTIFYSELKDFFNAGSLFEQLESIKESLNESGLEVLSSFVETKRS
LDQVDHAEDLDKNDTIQILMTTLQSLSSLRSVLMKGLESGLRNDAPDNAIAMRQKWRLCEISLE
DYSFVLLSRFINTLEALGGSASLAKDVARNTTLWDTTLDALVIGINQVSFSGWKTDECIAIGNE
ILSWKQKGLSESEGCEDGKYIWSLRLKATLDRARRLTEEYSEALLSIFPEKVMDVLVIRKIHPF
LPSFKSEFTASVPLTRIRDIAHRNDIPHDLKQEIKHTIQNKLHRNAGPEDLIATEVMLARITKT
PGEYSETFVEQFTIFYSELKDFFNAGSLFEQLESIKESLNESGLEVLSSFVETKRSLDQVDHAE
DLDKNDTIQILMTTLQSLSSLRSVLMKGLESGLRNDAPDNAIAMRQKWRLCEISLEDYSFVLLS
RFINTLEALGGSASLAKDVARNTTLWDTTLDALVIGINQVSFSGWKTDECIAIGNEILSWKQKG
LSESEGCEDGKYIWSLRLKATLDRARRLTEEYSEALLSIFPEKVMDVLVIRKIHPFLPSFKSEF
TASVPLTRIRDIAHRNDIPHDLKQEIKHTIQNKLHRNAGPEDLIATEVMLARITKTPGEYSETF
VEQFTIFYSELKDFFNAGSLFEQLESIKESLNESGLEVLSSFVETKRSLDQVDHAEDLDKNDTI
QILMTTLQSLSSLRSVLMKGLESGLRNDAPDNAIAMRQKWRLCEISLEDYSFVLLSRFINTLEA
LGGSASLAKDVARNTTLWDTTLDALVIGINQVSFSGWKTDECIAIGNEILSWKQKGLSESEGCE
DGKYIWSLRLKATLDRARRLTEEYSEALLSIFPEKVMDVLVIRKIHPFLPSFKSEFTASVPLTR
IRDIAHRNDIPHDLKQEIKHTIQNKLHRNAGPEDLIATEVMLARITKTPGEYSETFVEQFTIFY
SELKDFFNAGSLFEQLESIKESLNESGLEVLSSFVETKRSLDQVDHAEDLDKNDTIQILMTTLQ
SLSSLRSVLMKGLESGLRNDAPDNAIAMRQKWRLCEISLEDYSFVLLSRFINTLEALGGSASLA
KDVARNTTLWDTTLDALVIGINQVSFSGWKTDECIAIGNEILSWKQKGLSESEGCEDGKYIWSL
RLKATLDRARRLTEEYSEALLSIFPEKVM(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	11739183-11734667(+) 11739167-11734636(+) 11738931-11734619(-)
Potential amino acid sequence	MNFANHENIHYFFREYRKKCFRVLFR(+) MKVKRDEFCESREHPLLFQGI(+) MLARITKTPGEYSETFVEQFTIFYSELKDFFNAGSLFEQLESIKESLNESGLEVLSSFVETKRS LDQVDHAEDLDKNDTIQILMTTLQSLSSLRSVLMKGLESGLRNDAPDNAIAMRQKWRLCEISLE DYSFVLLSRFINTLEALGGSASLAKDVARNTTLWDTTLDALVIGINQVSFSGWKTDECIAIGNE ILSWKQKGLSESEGCEDGKYIWSLRLKATLDRARRLTEEYSEALLSIFPEKVMDVLVIRKIHPF LPSFKSEFTASVPLTRIRDIAHRNDIPHDLKQEIKHTIQNKLHRNAGPEDLIATEVMLARITKT PGEYSETFVEQFTIFYSELKDFFNAGSLFEQLESIKESLNESGLEVLSSFVETKRSLDQVDHAE DLDKNDTIQILMTTLQSLSSLRSVLMKGLESGLRNDAPDNAIAMRQKWRLCEISLEDYSFVLLS RFINTLEALGGSASLAKDVARNTTLWDTTLDALVIGINQVSFSGWKTDECIAIGNEILSWKQKG LSESEGCEDGKYIWSLRLKATLDRARRLTEEYSEALLSIFPEKVMDVLVIRKIHPFLPSFKSEF TASVPLTRIRDIAHRNDIPHDLKQEIKHTIQNKLHRNAGPEDLIATEVMLARITKTPGEYSETF VEQFTIFYSELKDFFNAGSLFEQLESIKESLNESGLEVLSSFVETKRSLDQVDHAEDLDKNDTI QILMTTLQSLSSLRSVLMKGLESGLRNDAPDNAIAMRQKWRLCEISLEDYSFVLLSRFINTLEA LGGSASLAKDVARNTTLWDTTLDALVIGINQVSFSGWKTDECIAIGNEILSWKQKGLSESEGCE DGKYIWSLRLKATLDRARRLTEEYSEALLSIFPEKVMDVLVIRKIHPFLPSFKSEFTASVPLTR IRDIAHRNDIPHDLKQEIKHTIQNKLHRNAGPEDLIATEVMLARITKTPGEYSETFVEQFTIFY SELKDFFNAGSLFEQLESIKESLNESGLEVLSSFVETKRSLDQVDHAEDLDKNDTIQILMTTLQ SLSSLRSVLMKGLESGLRNDAPDNAIAMRQKWRLCEISLEDYSFVLLSRFINTLEALGGSASLA KDVARNTTLWDTTLDALVIGINQVSFSGWKTDECIAIGNEILSWKQKGLSESEGCEDGKYIWSL RLKATLDRARRLTEEYSEALLSIFPEKVM(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os12g0297500_circ_g.7

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