Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT3G06880_circ_g.5 |
ID in PlantcircBase | ath_circ_020186 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr3: 2172733-2172978 JBrowse» |
Reference genome | TAIR10.38 |
Type | ei-circRNA |
Identification method | PcircRNA_finder |
Parent gene | AT3G06880 |
Parent gene annotation |
Transducin/WD40 repeat-like superfamily protein |
Parent gene strand | - |
Alternative splicing | AT3G06880_circ_g.6 AT3G06880_circ_g.7 |
Support reads | 11 |
Tissues | inflorescences |
Exon boundary | No-No |
Splicing signals | CC-TA |
Number of exons covered | AT3G06880.1:1 AT3G06880.4:1 AT3G06880.5:1 AT3G06880.3:1 AT3G06880.2:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.453954678 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |