Plant Circular RNA Database

Detail information of Csa4G064050_circ_g.2

			
						 General Information
					
						CircRNA Name
						Csa4G064050_circ_g.2
					
						ID in PlantcircBase
						csa_circ_002396
					
						Alias
						Chr4:5152118_5156590
					
						Organism
						
							Cucumis sativus						
					
						Position
						
							chrChr4: 5152118-5156590  JBrowse»						
					
						Reference genome
						
							Cucumis sativus v1.5						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Csa4G064050						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							Csa4G064050_circ_g.1 						
					
						Support reads
						NA
					
						Tissues
						leaf,root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Csa4G064050.1:6

General Information
CircRNA Name	Csa4G064050_circ_g.2
ID in PlantcircBase	csa_circ_002396
Alias	Chr4:5152118_5156590
Organism	Cucumis sativus
Position	chrChr4: 5152118-5156590 JBrowse»
Reference genome	Cucumis sativus v1.5
Type	e-circRNA
Identification method	CIRI2
Parent gene	Csa4G064050
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	Csa4G064050_circ_g.1
Support reads	NA
Tissues	leaf,root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Csa4G064050.1:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CACGCTTTGATGTCAGGATTGTTGTCAATATCATCAAGCTAAGGATGGAGACGGATGGGTCGAA
TATAAAGGTTCTCTAGTCTTTGATAAACCTCAGAAAggagctgcaggagttgctgttcaatatc
tgggttacactcctggactttttattgtggggctctttgctattctagtcttgtggatgtatgc
taactttt

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GGAGCTGCAGGAGTTGCTGTTCAATATCTGGGTTACACTCCTGGACTTTTTATTGTGGGGCTCT
TTGCTATTCTAGTCTTGTGGATGTATGCTAACTTTTGGATTACAGGGACGTTGTTTATAGTTGG
AGGTACAAACTTCTTTCCATAAATTGGGCTCTTTGTAATTACCAGTTTAGTCTCATATTCATTT
AGATTAGGGTCTGCCCTTGTTGATAGGGTTGAGACTCCATTTCTTTTCCCTCCCTATGATATGT
GTTACTTTTCACATTTCTCATTCTCGGTTTCCTACACAGACACATATCTTAATAGTTAATACTG
TGTTACAGAGTTGACTACTAGATCTTTTCCATGGTTGTGGTTTGCGTGTCTTCATAGTAGCCAA
TAGCCATAGTTTACTTCTATTTTTTGTGATTGAAGGTTCAATGTTCCAATCTGTGTATGGCTTT
CCACAATGCAATTATTTTTTCTGTAGTCAACGGGGTAAAAAGGAAAAAACAACCACATATATTT
CATAAATAAGTCTATTGAAGCTATTGGGGGAAGGTGAATTATGGCAACGTTTCACCATATTAGA
TGTTATATTGACTGAAAAAGTGCTATTTTGCATACAAATGTTGTCTCTGCATCTTCCAAGACTG
ATATCTTATCTGTGAATTGTCACGAGGGTGTTACAAAAGTATCAACTAATTTCTCCGTTTGTAT
GGAGTTACATGTACTAATAAAATGTCTATAGTACTGGGAAGGAAAATGTTTATGGGCATATTAT
CTCTAAAATAAATATTTTAAATTTAGAAATGACATGTAGAGAAAGATAGATGTTTCCAATACTT
TCCAATTTTACTGCACACTGCTCATGGTGGTTGCAATAAGAGATCTATATGAACTTTTTATACT
TCTGCACACCACTATTCACCCTTATGCCCACTTTAGTATCCGTTTCCCTTAAGGGTAAATTTTC
TTGATGAATCTATACTCCACTTCAATCAAATTGCTATTTGAATCTTGAAATTCTGTCAGTTGAT
TTGGGTTTTTGGTTATCCTTTCTTATTTGCAGGTTATTTATTCTCTCTTAATCATGCACGGTTG
GTGGTCTTGATGGCAACTGTATATGCTATATATTGTGTCAAAGTTCGTGTTGGATGGCCGGGTG
TCTTTCTCTCAATAAATCTTGCATTTCTATCCAATGATGCATTAAATTATTTGCTCCAATGGTG
TGATAAGGCGAGTGAGAGCTCACATTTTGAAGAGCAGAAACAATCTGAAACAGTTTCGGGAGAT
GAATTCTCAGGAGAGTGTGAATACTCTATTCCTACCAGTGAGTCGGAGAAGGTTCATCCATGCA
AGTCAGCCAGCCCAACTGTTGTGACATCTGTTGTTGATAACCAAAAAGAGGCTTCTTGTAGCAA
GGTGACCAAAGATCAGACTGATTCAGTTGATGAGATGAAAAGGATTTTGGATAGTGGGGACCAT
TATGAAGCGCTGGGATTTACACGTCACAAGAAGATTGATGTCATAGTTTTAAAAAAGGAATACA
GAAAAAAGGTGACGTGGTGTGCTCATTATTTTGGAACACAATTTCCCTTTTTCACATTTGAAAA
ATAATGGGGGTCTAATTATGTAATTTAGTCATTGGGATCACTCTCAAACACATTTTTCTTGTGA
ATTATAAAAATATATCTTGAAGGGGAACTGACTTGCAGTATGTGAATGAAACGTTACTATATTC
CTTAGATATTTTTCCTGTTAGGCATGTTCCTCAGGAAAATTCTTAAAACCATCACTATCTAGTG
GAAATTGACCTATAATTGTAACAGAATTCTTATCTATATTGAGACATATGTCAGATGTAGTAAC
ATGTTGATTTTCTAACTTAATATTTAAATATATAGTGATCTATTCGTGATTTTATGTCATGTGA
CTCATGTCTATGCTATTTCATATGAAAAGATGCTACACTTCATTTTTTGTATCATATTAACATA
TTTATATAACTCTTAATCAGTTTTGGTACATTGGTATACTGCTTTTTTTTTAAAGAACATATTT
AGGGTATGTTTTGAAATTGATCACTGTTTGGGTGAAACAATATCAAAGAAGTTAGATAAATTTG
CCTGGAAAAATTATTGTACTCCCATGGTCTCAGTCCCGGCTACATAGCTGAGAATATTATATGG
GAAAAGTAAAATGATGTCAGAGGCTAATGAAATTCCTTTCCATTTGCTCTTGATGCCAACATTC
TAGTATTAGTCACTCCTAGAATCTCTTGAGGAAAAATTGTACTAATGTTTGTCTTTTCTTTTAG
GCCGTGCTTGTGCATCCTGATAAAAATATGGGAAGTCCATTGGCGAGTGAGTCATTTAAGAAGC
TTCAATGTGCATATGAGGTAATGTTAACTTTTTTGTCTTAGCTTTCTGTTTCTTCAATCATATC
TGCCGCGAGAGTTGTGAGTGGCTTTCAACTCTATGGCCATTATCATCTCTTACTCATGTTTGCA
TGGAAAATTAGGTTCTTTCTGACTCTGTGAAGAAAAGAGACTATGATGAGCAATTGAGAAAGGA
GGAATCGAAGACTAAAAGTGTCTGCCAGAGGTCCCAGTCCTATGGGACTTCACAACAGGTTGTG
CATAATCTTTGTACGATTGATGCTGACATTTTATAGTTTAATTTATGTGTGTTTCATTCATGAT
AAATGTTCATTTGTTTCTAACTCAGATGATATTTATGGTAATTAGAAAGGAAGCTAATACAATT
ATACTAATAAAGATGGCAATTTCTTTCTGACTAGACTCTGTAGGAGGGAGAGAGAGAATGAAGC
ATCTTCTAGGCATTAGTCAATCTTATTCTTCGGTTCAATATACTTTCAAGTTACGTCTAGATGG
CATTGTAAGATTTGAAGCATTTGCTTACATAGACTCTTCGGAGTTGTTTGGGCGTAGAGTTGCT
GTAGTTTGTGGTTATTGTAATATGTGGAATTATATAATAGTTTTGTGGAGTTAGAATAGTTTGT
CTTTGGGGTGTAGGCTATTTTATCTGAGTTTAGATAGTTTGTATTTGTGATAATCTGAGTTTAG
GAAGTTTGTATTTGCGATGCATGCTATTTGAACCTAGATTCAAGAAGTTTATGTTTGGGGGGTA
AATTATTCTAGTTCGAGTTTACAATTTATGTGTTTAGGTTGCTGAATTTTTTAACCTGGAGTTC
TTAAGTTTGGTATCTAAATATCATATTTTGTAAACAGAAATAAAAATATTTGTTCTGCCAATCT
TTAAAAATGCATTAGATTTTAAGTTACGTTCTTCTCCGTTCATTTGGTCATTTTGGGGTTGAAA
GTGCACAAAAGCAACCAATGCTCTAAGTCCATTTACACAATTTTGTTTGGTTTGCTCTACACTC
AATGTTTCTAGAATGCCAAATTACAATAAAAGAAGACTAATACCATGCACCGGTCATCGACCAA
GTATAGGTGGTTGCTGGAGGTGATTGTCAGAGTTGACCGTTAGAAGTCGTTATCATTGCAAATA
ACTGGGGCTGGTTGCTGCTGAAATTTGTCGTTATTGGTGGTTTTTGCAGAAGTTAGTTGTCTGA
GTTGGTGGAGTCATTAGAAACATGGGAGAGAGAGAGAAATGGTTATTTTAACCATTGAGATGAA
AATACTACCTTAGCCACTGAGTTAAAGTAGCCCCTTACTCCCATTTTCTTAAAGCCTTCCCCAA
GTGTTTGAGTGAGCTATTATAACCGCTCAACCCATTCCAAATTGGAGCCTCAGACTACTGTCCT
TTTGTTTCCTATATGGTGGAATCCATTGTTGTTTCTTCTGTAGATTTGTGTGATTCTTTTTAAA
TTATTGATTGTGAATTAATGGCTTGAAAATTATTTTTGAAGATAGACGTAGGGAGAGGAACCAG
TCTAGATTTTGATACCTTTTTAAGAATTAGTTTCATAACCTCCATTTGAGATACTGGCCCAAAG
AATTTAAGTGGCAATGCAAGTCGCCTCTTACAGAAGAAGCTTGTACCTAATCCTTAATTATGCA
TGCTTTCACTGTTAGATTCTTGTGACTACTTGAAGTGAATTAATTTGTCGGGGACAAGTGTGGC
TTCTGAGGCTTGTTTCTTCTTGTCTGAGCATTTCTCAAGTTGCTAGTGTATAAGCAACTTTTAA
TCTACTCTGTGAGCAGATGAATTCCGATTATTGCTCTGAGGAGTCAAGACGCATACAGTGCAGT
AAATGCGGTCATTCACACATATGGGTCTGCACAAATAGGAATAAGACGAAGGCAAGATGGTGTC
AGGTTATTCTCTAAGCTTTATATGTACTCTCTGTTTGAATCTCTCTTTGTGTGAATTTTAATTT
TGAGAATAAGTTTGTTCGGTACACGCTTTGATGTCAGGATTGTTGTCAATATCATCAAGCTAAG
GATGGAGACGGATGGGTCGAATATAAAGGTTCTCTAGTCTTTGATAAACCTCAGAAA
						
					

			
		

Sequences
Splice junction sequence	CACGCTTTGATGTCAGGATTGTTGTCAATATCATCAAGCTAAGGATGGAGACGGATGGGTCGAA TATAAAGGTTCTCTAGTCTTTGATAAACCTCAGAAAggagctgcaggagttgctgttcaatatc tgggttacactcctggactttttattgtggggctctttgctattctagtcttgtggatgtatgc taactttt
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GGAGCTGCAGGAGTTGCTGTTCAATATCTGGGTTACACTCCTGGACTTTTTATTGTGGGGCTCT TTGCTATTCTAGTCTTGTGGATGTATGCTAACTTTTGGATTACAGGGACGTTGTTTATAGTTGG AGGTACAAACTTCTTTCCATAAATTGGGCTCTTTGTAATTACCAGTTTAGTCTCATATTCATTT AGATTAGGGTCTGCCCTTGTTGATAGGGTTGAGACTCCATTTCTTTTCCCTCCCTATGATATGT GTTACTTTTCACATTTCTCATTCTCGGTTTCCTACACAGACACATATCTTAATAGTTAATACTG TGTTACAGAGTTGACTACTAGATCTTTTCCATGGTTGTGGTTTGCGTGTCTTCATAGTAGCCAA TAGCCATAGTTTACTTCTATTTTTTGTGATTGAAGGTTCAATGTTCCAATCTGTGTATGGCTTT CCACAATGCAATTATTTTTTCTGTAGTCAACGGGGTAAAAAGGAAAAAACAACCACATATATTT CATAAATAAGTCTATTGAAGCTATTGGGGGAAGGTGAATTATGGCAACGTTTCACCATATTAGA TGTTATATTGACTGAAAAAGTGCTATTTTGCATACAAATGTTGTCTCTGCATCTTCCAAGACTG ATATCTTATCTGTGAATTGTCACGAGGGTGTTACAAAAGTATCAACTAATTTCTCCGTTTGTAT GGAGTTACATGTACTAATAAAATGTCTATAGTACTGGGAAGGAAAATGTTTATGGGCATATTAT CTCTAAAATAAATATTTTAAATTTAGAAATGACATGTAGAGAAAGATAGATGTTTCCAATACTT TCCAATTTTACTGCACACTGCTCATGGTGGTTGCAATAAGAGATCTATATGAACTTTTTATACT TCTGCACACCACTATTCACCCTTATGCCCACTTTAGTATCCGTTTCCCTTAAGGGTAAATTTTC TTGATGAATCTATACTCCACTTCAATCAAATTGCTATTTGAATCTTGAAATTCTGTCAGTTGAT TTGGGTTTTTGGTTATCCTTTCTTATTTGCAGGTTATTTATTCTCTCTTAATCATGCACGGTTG GTGGTCTTGATGGCAACTGTATATGCTATATATTGTGTCAAAGTTCGTGTTGGATGGCCGGGTG TCTTTCTCTCAATAAATCTTGCATTTCTATCCAATGATGCATTAAATTATTTGCTCCAATGGTG TGATAAGGCGAGTGAGAGCTCACATTTTGAAGAGCAGAAACAATCTGAAACAGTTTCGGGAGAT GAATTCTCAGGAGAGTGTGAATACTCTATTCCTACCAGTGAGTCGGAGAAGGTTCATCCATGCA AGTCAGCCAGCCCAACTGTTGTGACATCTGTTGTTGATAACCAAAAAGAGGCTTCTTGTAGCAA GGTGACCAAAGATCAGACTGATTCAGTTGATGAGATGAAAAGGATTTTGGATAGTGGGGACCAT TATGAAGCGCTGGGATTTACACGTCACAAGAAGATTGATGTCATAGTTTTAAAAAAGGAATACA GAAAAAAGGTGACGTGGTGTGCTCATTATTTTGGAACACAATTTCCCTTTTTCACATTTGAAAA ATAATGGGGGTCTAATTATGTAATTTAGTCATTGGGATCACTCTCAAACACATTTTTCTTGTGA ATTATAAAAATATATCTTGAAGGGGAACTGACTTGCAGTATGTGAATGAAACGTTACTATATTC CTTAGATATTTTTCCTGTTAGGCATGTTCCTCAGGAAAATTCTTAAAACCATCACTATCTAGTG GAAATTGACCTATAATTGTAACAGAATTCTTATCTATATTGAGACATATGTCAGATGTAGTAAC ATGTTGATTTTCTAACTTAATATTTAAATATATAGTGATCTATTCGTGATTTTATGTCATGTGA CTCATGTCTATGCTATTTCATATGAAAAGATGCTACACTTCATTTTTTGTATCATATTAACATA TTTATATAACTCTTAATCAGTTTTGGTACATTGGTATACTGCTTTTTTTTTAAAGAACATATTT AGGGTATGTTTTGAAATTGATCACTGTTTGGGTGAAACAATATCAAAGAAGTTAGATAAATTTG CCTGGAAAAATTATTGTACTCCCATGGTCTCAGTCCCGGCTACATAGCTGAGAATATTATATGG GAAAAGTAAAATGATGTCAGAGGCTAATGAAATTCCTTTCCATTTGCTCTTGATGCCAACATTC TAGTATTAGTCACTCCTAGAATCTCTTGAGGAAAAATTGTACTAATGTTTGTCTTTTCTTTTAG GCCGTGCTTGTGCATCCTGATAAAAATATGGGAAGTCCATTGGCGAGTGAGTCATTTAAGAAGC TTCAATGTGCATATGAGGTAATGTTAACTTTTTTGTCTTAGCTTTCTGTTTCTTCAATCATATC TGCCGCGAGAGTTGTGAGTGGCTTTCAACTCTATGGCCATTATCATCTCTTACTCATGTTTGCA TGGAAAATTAGGTTCTTTCTGACTCTGTGAAGAAAAGAGACTATGATGAGCAATTGAGAAAGGA GGAATCGAAGACTAAAAGTGTCTGCCAGAGGTCCCAGTCCTATGGGACTTCACAACAGGTTGTG CATAATCTTTGTACGATTGATGCTGACATTTTATAGTTTAATTTATGTGTGTTTCATTCATGAT AAATGTTCATTTGTTTCTAACTCAGATGATATTTATGGTAATTAGAAAGGAAGCTAATACAATT ATACTAATAAAGATGGCAATTTCTTTCTGACTAGACTCTGTAGGAGGGAGAGAGAGAATGAAGC ATCTTCTAGGCATTAGTCAATCTTATTCTTCGGTTCAATATACTTTCAAGTTACGTCTAGATGG CATTGTAAGATTTGAAGCATTTGCTTACATAGACTCTTCGGAGTTGTTTGGGCGTAGAGTTGCT GTAGTTTGTGGTTATTGTAATATGTGGAATTATATAATAGTTTTGTGGAGTTAGAATAGTTTGT CTTTGGGGTGTAGGCTATTTTATCTGAGTTTAGATAGTTTGTATTTGTGATAATCTGAGTTTAG GAAGTTTGTATTTGCGATGCATGCTATTTGAACCTAGATTCAAGAAGTTTATGTTTGGGGGGTA AATTATTCTAGTTCGAGTTTACAATTTATGTGTTTAGGTTGCTGAATTTTTTAACCTGGAGTTC TTAAGTTTGGTATCTAAATATCATATTTTGTAAACAGAAATAAAAATATTTGTTCTGCCAATCT TTAAAAATGCATTAGATTTTAAGTTACGTTCTTCTCCGTTCATTTGGTCATTTTGGGGTTGAAA GTGCACAAAAGCAACCAATGCTCTAAGTCCATTTACACAATTTTGTTTGGTTTGCTCTACACTC AATGTTTCTAGAATGCCAAATTACAATAAAAGAAGACTAATACCATGCACCGGTCATCGACCAA GTATAGGTGGTTGCTGGAGGTGATTGTCAGAGTTGACCGTTAGAAGTCGTTATCATTGCAAATA ACTGGGGCTGGTTGCTGCTGAAATTTGTCGTTATTGGTGGTTTTTGCAGAAGTTAGTTGTCTGA GTTGGTGGAGTCATTAGAAACATGGGAGAGAGAGAGAAATGGTTATTTTAACCATTGAGATGAA AATACTACCTTAGCCACTGAGTTAAAGTAGCCCCTTACTCCCATTTTCTTAAAGCCTTCCCCAA GTGTTTGAGTGAGCTATTATAACCGCTCAACCCATTCCAAATTGGAGCCTCAGACTACTGTCCT TTTGTTTCCTATATGGTGGAATCCATTGTTGTTTCTTCTGTAGATTTGTGTGATTCTTTTTAAA TTATTGATTGTGAATTAATGGCTTGAAAATTATTTTTGAAGATAGACGTAGGGAGAGGAACCAG TCTAGATTTTGATACCTTTTTAAGAATTAGTTTCATAACCTCCATTTGAGATACTGGCCCAAAG AATTTAAGTGGCAATGCAAGTCGCCTCTTACAGAAGAAGCTTGTACCTAATCCTTAATTATGCA TGCTTTCACTGTTAGATTCTTGTGACTACTTGAAGTGAATTAATTTGTCGGGGACAAGTGTGGC TTCTGAGGCTTGTTTCTTCTTGTCTGAGCATTTCTCAAGTTGCTAGTGTATAAGCAACTTTTAA TCTACTCTGTGAGCAGATGAATTCCGATTATTGCTCTGAGGAGTCAAGACGCATACAGTGCAGT AAATGCGGTCATTCACACATATGGGTCTGCACAAATAGGAATAAGACGAAGGCAAGATGGTGTC AGGTTATTCTCTAAGCTTTATATGTACTCTCTGTTTGAATCTCTCTTTGTGTGAATTTTAATTT TGAGAATAAGTTTGTTCGGTACACGCTTTGATGTCAGGATTGTTGTCAATATCATCAAGCTAAG GATGGAGACGGATGGGTCGAATATAAAGGTTCTCTAGTCTTTGATAAACCTCAGAAA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.098684591

Conservation Information
Conserved circRNAs	NA
PMCS	0.098684591

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							5152203-5156587(+)
						
						Potential amino acid sequence
						
							MYANFWITGTLFIVGGYLFSLNHARLVVLMATVYAIYCVKVRVGWPGVFLSINLAFLSNDALNY
LLQWCDKASESSHFEEQKQSETVSGDEFSGECEYSIPTSESEKVHPCKSASPTVVTSVVDNQKE
ASCSKVTKDQTDSVDEMKRILDSGDHYEALGFTRHKKIDVIVLKKEYRKKAVLVHPDKNMGSPL
ASESFKKLQCAYEVLSDSVKKRDYDEQLRKEESKTKSVCQRSQSYGTSQQMNSDYCSEESRRIQ
CSKCGHSHIWVCTNRNKTKARWCQDCCQYHQAKDGDGWVEYKGSLVFDKPQKGAAGVAVQYLGY
TPGLFIVGLFAILVLWMYANFWITGTLFIVGGYLFSLNHARLVVLMATVYAIYCVKVRVGWPGV
FLSINLAFLSNDALNYLLQWCDKASESSHFEEQKQSETVSGDEFSGECEYSIPTSESEKVHPCK
SASPTVVTSVVDNQKEASCSKVTKDQTDSVDEMKRILDSGDHYEALGFTRHKKIDVIVLKKEYR
KKAVLVHPDKNMGSPLASESFKKLQCAYEVLSDSVKKRDYDEQLRKEESKTKSVCQRSQSYGTS
QQMNSDYCSEESRRIQCSKCGHSHIWVCTNRNKTKARWCQDCCQYHQAKDGDGWVEYKGSLVFD
KPQKGAAGVAVQYLGYTPGLFIVGLFAILVLWMYANFWITGTLFIVGGYLFSLNHARLVVLMAT
VYAIYCVKVRVGWPGVFLSINLAFLSNDALNYLLQWCDKASESSHFEEQKQSETVSGDEFSGEC
EYSIPTSESEKVHPCKSASPTVVTSVVDNQKEASCSKVTKDQTDSVDEMKRILDSGDHYEALGF
TRHKKIDVIVLKKEYRKKAVLVHPDKNMGSPLASESFKKLQCAYEVLSDSVKKRDYDEQLRKEE
SKTKSVCQRSQSYGTSQQMNSDYCSEESRRIQCSKCGHSHIWVCTNRNKTKARWCQDCCQYHQA
KDGDGWVEYKGSLVFDKPQKGAAGVAVQYLGYTPGLFIVGLFAILVLWMYANFWITGTLFIVGG
YLFSLNHARLVVLMATVYAIYCVKVRVGWPGVFLSINLAFLSNDALNYLLQWCDKASESSHFEE
QKQSETVSGDEFSGECEYSIPTSESEKVHPCKSASPTVVTSVVDNQKEASCSKVTKDQTDSVDE
MKRILDSGDHYEALGFTRHKKIDVIVLKKEYRKKAVLVHPDKNMGSPLASESFKKLQCAYEVLS
DSVKKRDYDEQLRKEESKTKSVCQRSQSYGTSQQMNSDYCSEESRRIQCSKCGHSHIWVCTNRN
KTKARWCQDCCQYHQAKDGDGWVEYKGSLVFDKPQK
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to salt stress in root

Functional Information
Coding potential	Y
Potential coding position	5152203-5156587(+)
Potential amino acid sequence	MYANFWITGTLFIVGGYLFSLNHARLVVLMATVYAIYCVKVRVGWPGVFLSINLAFLSNDALNY LLQWCDKASESSHFEEQKQSETVSGDEFSGECEYSIPTSESEKVHPCKSASPTVVTSVVDNQKE ASCSKVTKDQTDSVDEMKRILDSGDHYEALGFTRHKKIDVIVLKKEYRKKAVLVHPDKNMGSPL ASESFKKLQCAYEVLSDSVKKRDYDEQLRKEESKTKSVCQRSQSYGTSQQMNSDYCSEESRRIQ CSKCGHSHIWVCTNRNKTKARWCQDCCQYHQAKDGDGWVEYKGSLVFDKPQKGAAGVAVQYLGY TPGLFIVGLFAILVLWMYANFWITGTLFIVGGYLFSLNHARLVVLMATVYAIYCVKVRVGWPGV FLSINLAFLSNDALNYLLQWCDKASESSHFEEQKQSETVSGDEFSGECEYSIPTSESEKVHPCK SASPTVVTSVVDNQKEASCSKVTKDQTDSVDEMKRILDSGDHYEALGFTRHKKIDVIVLKKEYR KKAVLVHPDKNMGSPLASESFKKLQCAYEVLSDSVKKRDYDEQLRKEESKTKSVCQRSQSYGTS QQMNSDYCSEESRRIQCSKCGHSHIWVCTNRNKTKARWCQDCCQYHQAKDGDGWVEYKGSLVFD KPQKGAAGVAVQYLGYTPGLFIVGLFAILVLWMYANFWITGTLFIVGGYLFSLNHARLVVLMAT VYAIYCVKVRVGWPGVFLSINLAFLSNDALNYLLQWCDKASESSHFEEQKQSETVSGDEFSGEC EYSIPTSESEKVHPCKSASPTVVTSVVDNQKEASCSKVTKDQTDSVDEMKRILDSGDHYEALGF TRHKKIDVIVLKKEYRKKAVLVHPDKNMGSPLASESFKKLQCAYEVLSDSVKKRDYDEQLRKEE SKTKSVCQRSQSYGTSQQMNSDYCSEESRRIQCSKCGHSHIWVCTNRNKTKARWCQDCCQYHQA KDGDGWVEYKGSLVFDKPQKGAAGVAVQYLGYTPGLFIVGLFAILVLWMYANFWITGTLFIVGG YLFSLNHARLVVLMATVYAIYCVKVRVGWPGVFLSINLAFLSNDALNYLLQWCDKASESSHFEE QKQSETVSGDEFSGECEYSIPTSESEKVHPCKSASPTVVTSVVDNQKEASCSKVTKDQTDSVDE MKRILDSGDHYEALGFTRHKKIDVIVLKKEYRKKAVLVHPDKNMGSPLASESFKKLQCAYEVLS DSVKKRDYDEQLRKEESKTKSVCQRSQSYGTSQQMNSDYCSEESRRIQCSKCGHSHIWVCTNRN KTKARWCQDCCQYHQAKDGDGWVEYKGSLVFDKPQK
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to salt stress in root

			
						 Other Information
					
						References
						Zhu et al., 2019

circRNA

Detail information of Csa4G064050_circ_g.2

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