Plant Circular RNA Database

Detail information of BGIOSGA018790_circ_g.2

			
						 General Information
					
						CircRNA Name
						BGIOSGA018790_circ_g.2
					
						ID in PlantcircBase
						osi_circ_005973
					
						Alias
						5:3203989|3208182
					
						Organism
						
							Oryza sativa ssp. indica						
					
						Position
						
							chr5: 3203989-3208182  JBrowse»						
					
						Reference genome
						
							Oryza_indica.ASM465v1.42						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							BGIOSGA018790						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							BGIOSGA018790_circ_g.1 						
					
						Support reads
						NA
					
						Tissues
						leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						BGIOSGA018790-TA:11

General Information
CircRNA Name	BGIOSGA018790_circ_g.2
ID in PlantcircBase	osi_circ_005973
Alias	5:3203989\|3208182
Organism	Oryza sativa ssp. indica
Position	chr5: 3203989-3208182 JBrowse»
Reference genome	Oryza_indica.ASM465v1.42
Type	e-circRNA
Identification method	find_circ
Parent gene	BGIOSGA018790
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	BGIOSGA018790_circ_g.1
Support reads	NA
Tissues	leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	BGIOSGA018790-TA:11

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AATCAACACGCTTCCCCATCAAGTTTCCTCTAATGCGGCCTTCCTTTGCTTTCAGTCTGCTGCA
AATTGATTTAATAGGCCTTCCAGATCGCTGTGTGGCccttggctggccaggaagttcattgtcg
aagtatgttgcaatgtgaaattgcaacaattgagcaaactctgttattatgtgagctggggccc
catttctc

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CCTTGGCTGGCCAGGAAGTTCATTGTCGAAGTATGTTGCAATGTGAAATTGCAACAATTGAGCA
AACTCTGTTATTATGTGAGCTGGGGCCCCATTTCTCTCCTGCCTCCTCAAGTTCTCATTATGTC
GAATTATCATAGCTAATTGATGAGTCAAATCATCCTGTAAAGAATAGCAGTGAGTTCATGAAGG
TGCATCATTCTTAAAATCATCCAGTAGGAAGGTTAAAAAAAAAAGTGTGGCATATAACTCACCT
CACTTCTGGAAGAGGTATCCATCATGACAGATGGCCTCACAGGGGGTGGGGGAATTGGAAGGAC
TTGCAAAATCATCCAGTCAGGGCGGGCAAATTTAGGGTTCAGACCCAATAGAAGACAGTCTTCG
TCACTTATACGTTTAAGAACATTGAGCACCTAAGTACAAAATAAACAGGAACCACATAGTTAAA
TGGATATTCTTAAAAATAATGTATTGAACCTGAGTAAAGATTGTGTGCATACCCTCTCAGCTGA
GAGGATTTGCTTTCGCTCCACTGGTTCAGGGAGTTGCTCTTGATCATCGTTTTTCTTCTTTGGT
GCTTTAAACTCTGCAACCATCTTCATACCATCAACAGTGATATTTGGCTGCTGAGCACCACAGC
CACCTCTTTTCTTTACTGGCTCATCAGTATCTTGCTGCTCCTGAACATCGAGGTCATCACCCCC
CGCGCAAACTTTTTTGCTCTTGCAAGCATCATATATTCTTTTCAGTCTATTTTTTGGGTTCCTT
ATTTTAAGAGCCTGCTTGAACTTAGTATCATCCTGCAACAAAAGCATTCATCCATTGATAAATA
AACTCAGAGTTGAGAAAAGATGGAAAACATAAGAGCTAGATCCGGTACAAAGATAAAATAAGAT
TTACGTTTGCATGTATAGTCCGAATAAACATTTTATATCATTATGATTCCAGTTTAGCATGTCT
AGCATTGAAAACAAAGGCATCTTCCGGTTTTTGCCTTAACAGTAAAAAAGAGGACAACAGAAGG
GGAAAAGTAAGTCACAAAAAAAAAGTGTATTTTCACATGTTAAACGAGTGTTACATACAAGGAT
ATTACCAGATTTAGCTTGCAAACACAAAAGATGCAAAACATAACAGAGTNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAACACTTTGTTAATACCTGGAATTCC
ACGAAGGGCCATCTCTGTCAACATGTTACTCTCAATCTTCTTGAGGAAGACATCATCCTCACCA
TATTCATCCTGTATTTCTCCCTTTTGAGCTTCATCATTTGTGATCCGGACACGAAGGATCAGTT
TATCTGCATTATCATCATTAAATATACATGACAAGTCATCATCGAATTCATGATTGATCTTCTC
TGCAATATCAGCCATGCTCAATTTCTTATCAACCATCATCTCACGATTCAGCTCAATACGCAGC
AGCCATGGAGAAATTTTATCAGGGTCAACGTCCTCATCAGGCATTTCATAGTAGGACTGGACAA
ATTCAGCATCTTCTTCAATAATGGTTCCCAGAGGATCAGGATCATACCATATCTCAGTAGCATG
AGTCACACTCCGCAGAGTAGTGTACTCTAAGGCACATTGGACATTCTTCGCCAATTCCTTCTTC
TTGTTCACCTCAGGCTTTAGGTGAACTGACAATGATGGAGTTTTTATATTCTTAGCAACATTAA
TGATTTCTCTCAGCCTGGGAACACCAAGGGTAACGTTCTTGGCACTGACACCAGCATAATGGAA
AGTATTCAGGGTCATCTGAGTTGCTGGTTCTCCGATGGACTGTGCAGCTACACATCCGATCATT
TCACCTGGAGCCACTAAAGATTGAAGGAATCTCGATTCAATCTCACCAATAACCCATTCAAAAG
CTTCCTTTGTAAGCCTGTACTCCTTCAAGACCCTCTTGCTAGCAAATGTGCTTCGANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATGACATCTCCCAAAGAATTCTAACAGTACCATG
CATACTTGCACCATGATATCTTCCATAGCCTTCACAAGTCGTCGCTGGATATATCCAGTTTCCG
AGGTCTTCACAGCAGTATCAATCAGACCTTCTCTACCACCCATAGCATGAAAGAAAAATTCTTG
TGGTGTCAGGCCTCGAAGGTAAGAGTTCTCCACAAACCCACGACTTTCAGGACCATAGTCATTT
TTCGTGAAGTGGGGCAATGTTCGATTGGTGAAGCCAAATGGGATCCGCTTGCCCTCAACATTCT
GCTGTCCGACACAAGCAGTCATCTGTGAAATATTGATGAAAGTTCCTTTTGAGCCTGCGGTGGC
CATAGCCTTCAGATTGTTACTTTCAGACAAACTCTTCTCGGCACTACTTCCAGCAACATCACGA
GCCTTGTTAAGAACCTAACATAGAGAAAGGTAGGTAAGCAAGTTGCAAGTCTATCAAATGAATG
GTTCATTCTTTTTTCAATTGAAAGAGCGGAGCATAAACAGTCAAGCAGTACCTCATTTACTCTA
TTTTCAAATGATTCCATTGTGGGGCGTCCTGCCTCAGCTTCCAATTGGTTATCACGGAATTGCT
TAATAAGTTTCTTCACATCATTTTTAGCTTTTGAGATTGTCTCATTAATATTCTCCATGGTGGC
TGCATCTGCAATTGTATCCCCAATTCCAATACTGAAACCATTTTGCAGAAGCCAGTAGTTGACC
AGCCACTGTGTATGACCTAAGAACTTGCGAGCAGCATCTGGACCAACCTCTTCCCTGCAAAGAA
CAATATATAACTTGCTAAGCAAAATTCCAAACTGCAACTGGATTTCAACATTAAAAGTTAATTA
CAGCATACTTACCAAATAACATGAATAAGACTTCCAGTTGATGTTCCAAGTGTCTTTTTGCAAA
GTGTACCAGATAGAAGCTCCCCCTTCTCTATCCGGACCATAGTATCACCAGGAGTAATAAATCC
TGTTTCAGCTTCAGAATGCCAGCCAGAAAATCTAATCAAATTGATTTGCTTGGGAATAATTAAG
TTGAAAACTTGTTTCCCAGTCCAAATAGGCCTCGGTTTCAAAATGGCGGGGGCAGGGACCTTTC
CATCAAAATCTTCCCACCACATTAAGATGTTCATAAATACATCCTGGAAAAAAAACAGAAAGAT
GAGCATAACTGCGCAGAAAAGAACTAATTAAGGTATCATGTGCAGACTTGCTAACCTTTTCAAT
AAGAGTATCTCTTTTAGTAATTTTGCGACACCCAAGAAGCGTGTCCTGGACAATACCCATAACA
GGCCTGTTCGATTGAGGAGACACAATACATTTTGGAACCATCATCAACTCTAGAACTTCAGCTC
TGGTCTCAAATGACTGAGGAACATGCATATTCATTTCATCCCCATCAAAATCTGCATTGTACGG
CGAAGTGACGGACAAGTTTAAGCGGAAAGTTGAATAGGGCATGATTTTAATGCGATGCCCCATG
ATAGACATTTTGTGAAGACTGGGTTGCCGATTGAAAAGAACAAAATCCCCATCATTGAGGTGCC
TTTCCACCTGAAATGAAAAAATAAAACGCCAAATAAGGAAACTAATATAGAAGACAATACTGTC
ATGTGACTATCAGTAAAGTAAATTCTACAACAAAGTTGGTACGCACCTTGTAACCCAGCTCCAG
ATGCTGATCACTACTTTTCTTCACATAACGAAGATCAAGCCTCTGACCGTCTTCCCTGATAATG
TATTTTGCACCTGTCTTCCCAGGGGGAGGGTGGGGCCCATATTCTACAAGTTCTTTCAACCTGA
GATCATTGAATAGGGCTAAGTGATCATTAAAGAACTGTGATCGTGCCTCGATAACAGTAAATGA
TTTACCTCTCGATGTTATATGGAGTAACAGTTTCTGGGTATGTCAGGTTCAAAGCAATACTCCA
TGGCACTCCCAATTCATCAATGTTAATATTCGGGTCTGGTGTGATGACAGTACGAGCTGAGAAA
TCAACACGCTTCCCCATCAAGTTTCCTCTAATGCGGCCTTCCTTTGCTTTCAGTCTGCTGCAAA
TTGATTTAATAGGCCTTCCAGATCGCTGTGTGGC
						
					

			
		

Sequences
Splice junction sequence	AATCAACACGCTTCCCCATCAAGTTTCCTCTAATGCGGCCTTCCTTTGCTTTCAGTCTGCTGCA AATTGATTTAATAGGCCTTCCAGATCGCTGTGTGGCccttggctggccaggaagttcattgtcg aagtatgttgcaatgtgaaattgcaacaattgagcaaactctgttattatgtgagctggggccc catttctc
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CCTTGGCTGGCCAGGAAGTTCATTGTCGAAGTATGTTGCAATGTGAAATTGCAACAATTGAGCA AACTCTGTTATTATGTGAGCTGGGGCCCCATTTCTCTCCTGCCTCCTCAAGTTCTCATTATGTC GAATTATCATAGCTAATTGATGAGTCAAATCATCCTGTAAAGAATAGCAGTGAGTTCATGAAGG TGCATCATTCTTAAAATCATCCAGTAGGAAGGTTAAAAAAAAAAGTGTGGCATATAACTCACCT CACTTCTGGAAGAGGTATCCATCATGACAGATGGCCTCACAGGGGGTGGGGGAATTGGAAGGAC TTGCAAAATCATCCAGTCAGGGCGGGCAAATTTAGGGTTCAGACCCAATAGAAGACAGTCTTCG TCACTTATACGTTTAAGAACATTGAGCACCTAAGTACAAAATAAACAGGAACCACATAGTTAAA TGGATATTCTTAAAAATAATGTATTGAACCTGAGTAAAGATTGTGTGCATACCCTCTCAGCTGA GAGGATTTGCTTTCGCTCCACTGGTTCAGGGAGTTGCTCTTGATCATCGTTTTTCTTCTTTGGT GCTTTAAACTCTGCAACCATCTTCATACCATCAACAGTGATATTTGGCTGCTGAGCACCACAGC CACCTCTTTTCTTTACTGGCTCATCAGTATCTTGCTGCTCCTGAACATCGAGGTCATCACCCCC CGCGCAAACTTTTTTGCTCTTGCAAGCATCATATATTCTTTTCAGTCTATTTTTTGGGTTCCTT ATTTTAAGAGCCTGCTTGAACTTAGTATCATCCTGCAACAAAAGCATTCATCCATTGATAAATA AACTCAGAGTTGAGAAAAGATGGAAAACATAAGAGCTAGATCCGGTACAAAGATAAAATAAGAT TTACGTTTGCATGTATAGTCCGAATAAACATTTTATATCATTATGATTCCAGTTTAGCATGTCT AGCATTGAAAACAAAGGCATCTTCCGGTTTTTGCCTTAACAGTAAAAAAGAGGACAACAGAAGG GGAAAAGTAAGTCACAAAAAAAAAGTGTATTTTCACATGTTAAACGAGTGTTACATACAAGGAT ATTACCAGATTTAGCTTGCAAACACAAAAGATGCAAAACATAACAGAGTNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAACACTTTGTTAATACCTGGAATTCC ACGAAGGGCCATCTCTGTCAACATGTTACTCTCAATCTTCTTGAGGAAGACATCATCCTCACCA TATTCATCCTGTATTTCTCCCTTTTGAGCTTCATCATTTGTGATCCGGACACGAAGGATCAGTT TATCTGCATTATCATCATTAAATATACATGACAAGTCATCATCGAATTCATGATTGATCTTCTC TGCAATATCAGCCATGCTCAATTTCTTATCAACCATCATCTCACGATTCAGCTCAATACGCAGC AGCCATGGAGAAATTTTATCAGGGTCAACGTCCTCATCAGGCATTTCATAGTAGGACTGGACAA ATTCAGCATCTTCTTCAATAATGGTTCCCAGAGGATCAGGATCATACCATATCTCAGTAGCATG AGTCACACTCCGCAGAGTAGTGTACTCTAAGGCACATTGGACATTCTTCGCCAATTCCTTCTTC TTGTTCACCTCAGGCTTTAGGTGAACTGACAATGATGGAGTTTTTATATTCTTAGCAACATTAA TGATTTCTCTCAGCCTGGGAACACCAAGGGTAACGTTCTTGGCACTGACACCAGCATAATGGAA AGTATTCAGGGTCATCTGAGTTGCTGGTTCTCCGATGGACTGTGCAGCTACACATCCGATCATT TCACCTGGAGCCACTAAAGATTGAAGGAATCTCGATTCAATCTCACCAATAACCCATTCAAAAG CTTCCTTTGTAAGCCTGTACTCCTTCAAGACCCTCTTGCTAGCAAATGTGCTTCGANNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATGACATCTCCCAAAGAATTCTAACAGTACCATG CATACTTGCACCATGATATCTTCCATAGCCTTCACAAGTCGTCGCTGGATATATCCAGTTTCCG AGGTCTTCACAGCAGTATCAATCAGACCTTCTCTACCACCCATAGCATGAAAGAAAAATTCTTG TGGTGTCAGGCCTCGAAGGTAAGAGTTCTCCACAAACCCACGACTTTCAGGACCATAGTCATTT TTCGTGAAGTGGGGCAATGTTCGATTGGTGAAGCCAAATGGGATCCGCTTGCCCTCAACATTCT GCTGTCCGACACAAGCAGTCATCTGTGAAATATTGATGAAAGTTCCTTTTGAGCCTGCGGTGGC CATAGCCTTCAGATTGTTACTTTCAGACAAACTCTTCTCGGCACTACTTCCAGCAACATCACGA GCCTTGTTAAGAACCTAACATAGAGAAAGGTAGGTAAGCAAGTTGCAAGTCTATCAAATGAATG GTTCATTCTTTTTTCAATTGAAAGAGCGGAGCATAAACAGTCAAGCAGTACCTCATTTACTCTA TTTTCAAATGATTCCATTGTGGGGCGTCCTGCCTCAGCTTCCAATTGGTTATCACGGAATTGCT TAATAAGTTTCTTCACATCATTTTTAGCTTTTGAGATTGTCTCATTAATATTCTCCATGGTGGC TGCATCTGCAATTGTATCCCCAATTCCAATACTGAAACCATTTTGCAGAAGCCAGTAGTTGACC AGCCACTGTGTATGACCTAAGAACTTGCGAGCAGCATCTGGACCAACCTCTTCCCTGCAAAGAA CAATATATAACTTGCTAAGCAAAATTCCAAACTGCAACTGGATTTCAACATTAAAAGTTAATTA CAGCATACTTACCAAATAACATGAATAAGACTTCCAGTTGATGTTCCAAGTGTCTTTTTGCAAA GTGTACCAGATAGAAGCTCCCCCTTCTCTATCCGGACCATAGTATCACCAGGAGTAATAAATCC TGTTTCAGCTTCAGAATGCCAGCCAGAAAATCTAATCAAATTGATTTGCTTGGGAATAATTAAG TTGAAAACTTGTTTCCCAGTCCAAATAGGCCTCGGTTTCAAAATGGCGGGGGCAGGGACCTTTC CATCAAAATCTTCCCACCACATTAAGATGTTCATAAATACATCCTGGAAAAAAAACAGAAAGAT GAGCATAACTGCGCAGAAAAGAACTAATTAAGGTATCATGTGCAGACTTGCTAACCTTTTCAAT AAGAGTATCTCTTTTAGTAATTTTGCGACACCCAAGAAGCGTGTCCTGGACAATACCCATAACA GGCCTGTTCGATTGAGGAGACACAATACATTTTGGAACCATCATCAACTCTAGAACTTCAGCTC TGGTCTCAAATGACTGAGGAACATGCATATTCATTTCATCCCCATCAAAATCTGCATTGTACGG CGAAGTGACGGACAAGTTTAAGCGGAAAGTTGAATAGGGCATGATTTTAATGCGATGCCCCATG ATAGACATTTTGTGAAGACTGGGTTGCCGATTGAAAAGAACAAAATCCCCATCATTGAGGTGCC TTTCCACCTGAAATGAAAAAATAAAACGCCAAATAAGGAAACTAATATAGAAGACAATACTGTC ATGTGACTATCAGTAAAGTAAATTCTACAACAAAGTTGGTACGCACCTTGTAACCCAGCTCCAG ATGCTGATCACTACTTTTCTTCACATAACGAAGATCAAGCCTCTGACCGTCTTCCCTGATAATG TATTTTGCACCTGTCTTCCCAGGGGGAGGGTGGGGCCCATATTCTACAAGTTCTTTCAACCTGA GATCATTGAATAGGGCTAAGTGATCATTAAAGAACTGTGATCGTGCCTCGATAACAGTAAATGA TTTACCTCTCGATGTTATATGGAGTAACAGTTTCTGGGTATGTCAGGTTCAAAGCAATACTCCA TGGCACTCCCAATTCATCAATGTTAATATTCGGGTCTGGTGTGATGACAGTACGAGCTGAGAAA TCAACACGCTTCCCCATCAAGTTTCCTCTAATGCGGCCTTCCTTTGCTTTCAGTCTGCTGCAAA TTGATTTAATAGGCCTTCCAGATCGCTGTGTGGC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS

Conservation Information
Conserved circRNAs	NA
PMCS

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							3208103-3203991(-)
3204013-3208136(-)
3207827-3204031(+)
						
					

						Potential amino acid sequence
						
							MGKRVDFSARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTG
AKYIIREDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY
STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLL
GCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKQINLIRFSG
WHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWL
VNYWLLQNGFSIGIGDTIADAATMENINETISKAKNDVKKLIKQFRDNQLEAEAGRPTMESFEN
RVNEVLNKARDVAGSSAEKSLSESNNLKAMATAGSKGTFINISQMTACVGQQNVEGKRIPFGFT
NRTLPHFTKNDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKA
MEDIMVQEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS
AKNVTLGVPRLREIINVAKNIKTPSLSVHLKPEVNKKKELAKNVQCALEYTTLRSVTHATEIWY
DPDPLGTIIEEDAEFVQSYYEMPDEDVDPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEF
DDDLSCIFNDDNADKLILRVRITNDEAQKGEIQDEYGEDDVFLKKIESNMLTEMALRGIPAKSG
NILDDTKFKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKKRGGCGAQQPN
ITVDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFARP
DWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQL
LQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNI
NIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYVKK
SSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDG
DEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMN
ILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKQINLIRFSGWHSEAETGFITPGDTMVRI
EKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIA
DAATMENINETISKAKNDVKKLIKQFRDNQLEAEAGRPTMESFENRVNEVLNKARDVAGSSAEK
SLSESNNLKAMATAGSKGTFINISQMTACVGQQNVEGKRIPFGFTNRTLPHFTKNDYGPESRGF
VENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVQEYRLTKEAFEWV
IGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK
NIKTPSLSVHLKPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDAEFVQSY
YEMPDEDVDPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFNDDNADKLILR
VRITNDEAQKGEIQDEYGEDDVFLKKIESNMLTEMALRGIPAKSGNILDDTKFKQALKIRNPKN
RLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKKRGGCGAQQPNITVDGMKMVAEFKAPKKKN
DDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFARPDWMILQVLPIPPPPVRPSV
MMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRA
TQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELGVPWSIALNLTYPE
TVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYVKKSSDQHLELGYKVERHLNDG
DFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLE
LMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILK
PRPIWTGKQVFNLIIPKQINLIRFSGWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTST
GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMENINETISKAKNDV
KKLIKQFRDNQLEAEAGRPTMESFENRVNEVLNKARDVAGSSAEKSLSESNNLKAMATAGSKGT
FINISQMTACVGQQNVEGKRIPFGFTNRTLPHFTKNDYGPESRGFVENSYLRGLTPQEFFFHAM
GGREGLIDTAVKTSETGYIQRRLVKAMEDIMVQEYRLTKEAFEWVIGEIESRFLQSLVAPGEMI
GCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKNIKTPSLSVHLKPEVNKKK
ELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDAEFVQSYYEMPDEDVDPDKISPWLLR
IELNREMMVDKKLSMADIAEKINHEFDDDLSCIFNDDNADKLILRVRITNDEAQKGEIQDEYGE
DDVFLKKIESNMLTEMALRGIPAKSGNILDDTKFKQALKIRNPKNRLKRIYDACKSKKVCAGGD
DLDVQEQQDTDEPVKKRGGCGAQQPNITVDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAE
RVLNVLKRISDEDCLLLGLNPKFARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMI
IRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKE
GRIRGNLMGKRVDFSARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPH
PPPGKTGAKYIIREDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH
RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMG
IVQDTLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKQI
NLIRFSGWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKF
LGHTQWLVNYWLLQNGFSIGIGDTIADAATMENINETISKAKNDVKKLIKQFRDNQLEAEAGRP
TMESFENRVNEVLNKARDVAGSSAEKSLSESNNLKAMATAGSKGTFINISQMTACVGQQNVEGK
RIPFGFTNRTLPHFTKNDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYI
QRRLVKAMEDIMVQEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNT
FHYAGVSAKNVTLGVPRLREIINVAKNIKTPSLSVHLKPEVNKKKELAKNVQCALEYTTLRSVT
HATEIWYDPDPLGTIIEEDAEFVQSYYEMPDEDVDPDKISPWLLRIELNREMMVDKKLSMADIA
EKINHEFDDDLSCIFNDDNADKLILRVRITNDEAQKGEIQDEYGEDDVFLKKIESNMLTEMALR
GIPAKSGNILDDTKFKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKKRGG
CGAQQPNITVDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGL
NPKFARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHI
ITEFAQLLQFHIATYFDNELPGQPR(-)
MNFLASQGPHSDLEGLLNQFAAD*(-)
MYFAPVFPGGGWGPYSTSSFNLSMLYGVTVSGYVRFKAILHGTPNSSMLIFGSGVMTVRAEKST
RFPIKFPLMRPSFAFSLLQIDLIGLPDRCVALGWPGSSLSKYVAM*(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	3208103-3203991(-) 3204013-3208136(-) 3207827-3204031(+)
Potential amino acid sequence	MGKRVDFSARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTG AKYIIREDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLL GCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKQINLIRFSG WHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWL VNYWLLQNGFSIGIGDTIADAATMENINETISKAKNDVKKLIKQFRDNQLEAEAGRPTMESFEN RVNEVLNKARDVAGSSAEKSLSESNNLKAMATAGSKGTFINISQMTACVGQQNVEGKRIPFGFT NRTLPHFTKNDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKA MEDIMVQEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVS AKNVTLGVPRLREIINVAKNIKTPSLSVHLKPEVNKKKELAKNVQCALEYTTLRSVTHATEIWY DPDPLGTIIEEDAEFVQSYYEMPDEDVDPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEF DDDLSCIFNDDNADKLILRVRITNDEAQKGEIQDEYGEDDVFLKKIESNMLTEMALRGIPAKSG NILDDTKFKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKKRGGCGAQQPN ITVDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFARP DWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQL LQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNI NIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYVKK SSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDG DEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMN ILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKQINLIRFSGWHSEAETGFITPGDTMVRI EKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIA DAATMENINETISKAKNDVKKLIKQFRDNQLEAEAGRPTMESFENRVNEVLNKARDVAGSSAEK SLSESNNLKAMATAGSKGTFINISQMTACVGQQNVEGKRIPFGFTNRTLPHFTKNDYGPESRGF VENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVQEYRLTKEAFEWV IGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK NIKTPSLSVHLKPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDAEFVQSY YEMPDEDVDPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFNDDNADKLILR VRITNDEAQKGEIQDEYGEDDVFLKKIESNMLTEMALRGIPAKSGNILDDTKFKQALKIRNPKN RLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKKRGGCGAQQPNITVDGMKMVAEFKAPKKKN DDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFARPDWMILQVLPIPPPPVRPSV MMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRA TQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELGVPWSIALNLTYPE TVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYVKKSSDQHLELGYKVERHLNDG DFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLE LMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILK PRPIWTGKQVFNLIIPKQINLIRFSGWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTST GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMENINETISKAKNDV KKLIKQFRDNQLEAEAGRPTMESFENRVNEVLNKARDVAGSSAEKSLSESNNLKAMATAGSKGT FINISQMTACVGQQNVEGKRIPFGFTNRTLPHFTKNDYGPESRGFVENSYLRGLTPQEFFFHAM GGREGLIDTAVKTSETGYIQRRLVKAMEDIMVQEYRLTKEAFEWVIGEIESRFLQSLVAPGEMI GCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKNIKTPSLSVHLKPEVNKKK ELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDAEFVQSYYEMPDEDVDPDKISPWLLR IELNREMMVDKKLSMADIAEKINHEFDDDLSCIFNDDNADKLILRVRITNDEAQKGEIQDEYGE DDVFLKKIESNMLTEMALRGIPAKSGNILDDTKFKQALKIRNPKNRLKRIYDACKSKKVCAGGD DLDVQEQQDTDEPVKKRGGCGAQQPNITVDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAE RVLNVLKRISDEDCLLLGLNPKFARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMI IRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKE GRIRGNLMGKRVDFSARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPH PPPGKTGAKYIIREDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMG IVQDTLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKQI NLIRFSGWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKF LGHTQWLVNYWLLQNGFSIGIGDTIADAATMENINETISKAKNDVKKLIKQFRDNQLEAEAGRP TMESFENRVNEVLNKARDVAGSSAEKSLSESNNLKAMATAGSKGTFINISQMTACVGQQNVEGK RIPFGFTNRTLPHFTKNDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYI QRRLVKAMEDIMVQEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNT FHYAGVSAKNVTLGVPRLREIINVAKNIKTPSLSVHLKPEVNKKKELAKNVQCALEYTTLRSVT HATEIWYDPDPLGTIIEEDAEFVQSYYEMPDEDVDPDKISPWLLRIELNREMMVDKKLSMADIA EKINHEFDDDLSCIFNDDNADKLILRVRITNDEAQKGEIQDEYGEDDVFLKKIESNMLTEMALR GIPAKSGNILDDTKFKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKKRGG CGAQQPNITVDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGL NPKFARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHI ITEFAQLLQFHIATYFDNELPGQPR(-) MNFLASQGPHSDLEGLLNQFAAD(-) MYFAPVFPGGGWGPYSTSSFNLSMLYGVTVSGYVRFKAILHGTPNSSMLIFGSGVMTVRAEKST RFPIKFPLMRPSFAFSLLQIDLIGLPDRCVALGWPGSSLSKYVAM(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Huang et al., 2021

circRNA

Detail information of BGIOSGA018790_circ_g.2

Address

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