Plant Circular RNA Database

Detail information of Zm00001d039612_circ_g.8

			
						 General Information
					
						CircRNA Name
						Zm00001d039612_circ_g.8
					
						ID in PlantcircBase
						zma_circ_007491
					
						Alias
						Zm03circ00010, zma_circ_0000981
					
						Organism
						
							Zea mays						
					
						Position
						
							chr3: 9057559-9061664  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRI2, find_circ
					
						Parent gene
						
							Zm00001d039612						
					
						Parent gene annotation
						
							embryo defective 2410
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d039612_circ_g.1 Zm00001d039612_circ_g.2 Zm00001d039612_circ_g.3 Zm00001d039612_circ_g.4 Zm00001d039612_circ_g.5 Zm00001d039612_circ_g.6 Zm00001d039612_circ_g.7 Zm00001d039612_circ_g.9 Zm00001d039612_circ_g.10 Zm00001d039612_circ_g.11 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d039612_T014:4
Zm00001d039612_T019:4
Zm00001d039612_T009:4
Zm00001d039612_T029:1
Zm00001d039612_T004:4
Zm00001d039612_T013:4
Zm00001d039612_T023:4
Zm00001d039612_T030:1
Zm00001d039612_T033:1
Zm00001d039612_T021:6
Zm00001d039612_T031:1
Zm00001d039612_T028:4
Zm00001d039612_T002:4
Zm00001d039612_T011:4
Zm00001d039612_T032:1
Zm00001d039612_T025:4
Zm00001d039612_T016:4
Zm00001d039612_T001:4
Zm00001d039612_T007:4
Zm00001d039612_T015:4
Zm00001d039612_T027:4

General Information
CircRNA Name	Zm00001d039612_circ_g.8
ID in PlantcircBase	zma_circ_007491
Alias	Zm03circ00010, zma_circ_0000981
Organism	Zea mays
Position	chr3: 9057559-9061664 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2, find_circ
Parent gene	Zm00001d039612
Parent gene annotation	embryo defective 2410
Parent gene strand	-
Alternative splicing	Zm00001d039612_circ_g.1 Zm00001d039612_circ_g.2 Zm00001d039612_circ_g.3 Zm00001d039612_circ_g.4 Zm00001d039612_circ_g.5 Zm00001d039612_circ_g.6 Zm00001d039612_circ_g.7 Zm00001d039612_circ_g.9 Zm00001d039612_circ_g.10 Zm00001d039612_circ_g.11
Support reads	NA
Tissues	leaf, endosperm, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d039612_T014:4 Zm00001d039612_T019:4 Zm00001d039612_T009:4 Zm00001d039612_T029:1 Zm00001d039612_T004:4 Zm00001d039612_T013:4 Zm00001d039612_T023:4 Zm00001d039612_T030:1 Zm00001d039612_T033:1 Zm00001d039612_T021:6 Zm00001d039612_T031:1 Zm00001d039612_T028:4 Zm00001d039612_T002:4 Zm00001d039612_T011:4 Zm00001d039612_T032:1 Zm00001d039612_T025:4 Zm00001d039612_T016:4 Zm00001d039612_T001:4 Zm00001d039612_T007:4 Zm00001d039612_T015:4 Zm00001d039612_T027:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CTATATCAAGTGCCTCACCAAGCACGCCACTAAATTTGGGACGGATTATTGACAGCAAACCATG
GCCTCTTCTTTTCTGAAAATTAAGCTGAAGTTCTGCcatggtatccccattgccacctccactg
gcatccagagagccacgccaatagcctcttagttcagctaagccaggaaatgctatatcttcca
ttgtgtca

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 597
Transcript exons: 9057559-9057690,9057833-9057898,9058011-9058286,9061542-
9061664
CATGGTATCCCCATTGCCACCTCCACTGGCATCCAGAGAGCCACGCCAATAGCCTCTTAGTTCA
GCTAAGCCAGGAAATGCTATATCTTCCATTGTGTCATCATCCAACCAATCATGATAAATTTCTA
ATGCCTTTAGCTGATCATTAAGACTTTCAGCATTGAACCCAACAGAATGCAGACATTGCATAAA
AAGTTCCTTTGATCTCGAACGGATAACTGGGTCTGTACTCCGTGAAAGAAGCCTTGCTAAAGGA
AGCATTTCAGCTACTTCAGCACCAGGAACCTCTAGTCTCATCCTCCACCTGCCCATCGAAGACA
TTATGCTACCAAGATGCCCTCCCATTGCTTTCTCTATGAACCCATTACTCTGACTTTCCACAGG
AAATCTATCACGCGTTCCAGGAAAAACATACTCCCCTTGAACCTCATATTTGCTATTAGCTTGC
TCCAGGATAGATTTTTCCATAGTAATAACATCACCGCTCCATCGAGCAGCTATATCAAGTGCCT
CACCAAGCACGCCACTAAATTTGGGACGGATTATTGACAGCAAACCATGGCCTCTTCTTTTCTG
AAAATTAAGCTGAAGTTCTGC
						
					

						Genomic sequence
						
							CATGGTATCCCCATTGCCACCTCCACTGGCATCCAGAGAGCCACGCCAATAGCCTCTTAGTTCA
GCTAAGCCAGGAAATGCTATATCTTCCATTGTGTCATCATCCAACCAATCATGATAAATTTCTA
ATGCCTGGAGCAAGTAACAAGGTAAAGTTTAACATAAATAATCATGTCAATATGAGACCATAAC
CATAGCATTAGACTAGATGTCAAAGTATCAAACCATATGCCAATGGATCTACTTGACAACAACA
CTAGCTTTAGTACAATACCTTTAGCTGATCATTAAGACTTTCAGCATTGAACCCAACAGAATGC
AGACATTGCATAAAAAGTTCCTGAAAACAAAAGGAGGGTTATATGGCACTCTGCCCTCTAATAA
TAGACATAAATACCAACATATATTTTATCCAACAGTAGAAAGGCATATTTGAAGGACCAAATGT
GTACCTTTGATCTCGAACGGATAACTGGGTCTGTACTCCGTGAAAGAAGCCTTGCTAAAGGAAG
CATTTCAGCTACTTCAGCACCAGGAACCTCTAGTCTCATCCTCCACCTGCCCATCGAAGACATT
ATGCTACCAAGATGCCCTCCCATTGCTTTCTCTATGAACCCATTACTCTGACTTTCCACAGGAA
ATCTATCACGCGTTCCAGGAAAAACATACTCCCCTTGAACCTCATATTTGCTATTAGCTTGCTC
CAGGATAGATTTTTCCATAGTAATCTGCGTTTGATATTAAAGAAAAAGGATAGTGAGGGAGAAA
GAGAGGGTTCCAAGATACCAAGGTTTTAAAGTCGTCCGAGCTAGTCCGAGCTCGATTAGGGTCT
CCGACTCGAGTAGAGTGACTAGATAGCGATTAGTCGTCCAAGTCGCCGACTAATCGCGATTAGT
CGTCCAACTAGGGGTTATGGTCGACTAGTTATGCCTGTTTTGGGCCACTAATCCGACCTTTATT
ATGTGAGTCGGCCCACCATCTGTACACAACACAAACGTTGTTTTGCCCTATGCCCCTGCTTGTA
CCAATACGGTACGCACTGTTGCGCGTGTGCTCTTACCTAGCTCAGCCACCCCTTCTCTAGCGTC
GCCGCCCCTTTACCCATCGTCGCCACTCTCCTCTCCTGCCGCCCTGTGGTGCTTTGGTGGCCCT
CTGCTCAAGCAGCAGTTGCGCTCCCTCCATCGCGTGTCGGTTGTAGTCTGCAGAGGCCCCCTTC
CAGCGTGTTCCCGTCCTCCTCTGTTGTCTGTTTAGAATTCAGAGATTGAGATGAGTACCTCTTC
AGACGGTAATTGCTCTGATATTTTGGTTGTTCAATGTTCTATGTTCACTAACTGAGCAGTATTG
TGCCCGCCTTGGCCTCCTCTTGAGTTGTGCTTCATTTGATTGTTGTGCCACTACATATGAGAAT
AGGAGGCGACGTAATAATGTTGAAATCATCTTCCCAGAATCTGTGTTGCCCCAGCCCTAGAACG
ATGGCAGTGGCACTGGTACAGTTCATGCAGTCATGCAGTCCAACTAGGCAGCTACAGATATATA
TATTCATATATATTGATATATACACACACACATATTGTCATGTTATAGGTGGACGACTATAGGA
CGACTAGGAGTCGACCAGGCTCGACTAATCGAGCAAATCGGCGACTAATCGCGATTAGTCACCT
TATCGGTGCTTAGGCGACTAGAGTCGACTAACCGACTTTAAAACTTTGCAAGATACTAAGATAG
CAATTAAAAGTAAGACAAAAACCTTGCTAGAAATGGATGAATAATGATAGGAAAAACCTATGGG
TGCATGATGCATTCACACCATACACCAATTAATTTGTGCTAACAACTGCAAATTAGTATCACTC
CTAGAGATCAAAAGCAGAGTAAAATTGATGATTGCTGAGGGTATATACGTTTAAAGAAGAGTAT
GGTCAGAGATTTAGAGCATAATAAGTGACTTGTTTCTACAGTGTGAGCATGTCCCCGATTCTTT
GGCTTAGTGAAGGTGATGCCAACATAGAACAGTGGGTGCCTTGCTGCCTGTAGAAAAAAAGGCG
GGCATGGCTGGGTGCCTGGGTCGTGAGGCGGCCTCTCCCTGTTGCGTGCCCTTGCACCTAGTGA
TTAGGTCATGTCGTGGTCAGTTTATCTTTTTTCACAGGCACAAATGTATATTGAGAACCAAAAT
GCTGTGAGTGTTTGTACTTTGGGGTTTCTATTCCTCTCATCATACAACGATACACAGCTCTCCT
ATGGTTCCAGAAATTTTGTTTCTACAGTGTGCATATCAGTATACACTTCCAAGGATGTGTTACT
AATTATTAGTTATTTTGTATTCCAGAACTCCACTGTATAGATCAATCTAAGTTCCTAGCAGAAA
TATCATCGCTTCTATAAAACAGCATGCCTCAAAAGATGGGTAGAGAGGTTTGCAGAGAGGCTTC
CAAATTGGAAAGCACACCTCCTTAACCTTGCTGCAGTGCTGCTGGTAGGACAGCTCTTGTGTGT
TTTGTTCTTTCAGCAATCCCCATCTACCTTCTCATTGCAATGAATACTCCCAAGTGGGTGATAA
AAGAAACTGATAAAATTAGAAGGGGGTTTATTTGGAAAGGAAGGAAGCTGGAGGCAATTGTCTG
GTTTCTTGGGAAACAGTTACAAAGTCTATCTCTCTTGGGGGTCTTGGGATCCCTAACCTGCAGT
TTAAGAGCTGCGCACTGCAAGCATAGTGGTTATGGCTGGAAAAAACTGACCCAAATAGACCATG
GCAGGGTCTTAACATTCCTGTGCAGCAATAGGTCAAAGACTTACTTGCAAAATCTGTGATATCT
ATTATTGGGAATGGGTCAGCACGCTGTTCTGGACTGACAATTGGTTGCATGGGGCCGCAATCAG
GGACATTGCACCAGAAGTAGCTGCCAAGGTGGGCAAAAGAGCTCTGTCCTCTACAACCGTAGCT
CAGGCCCTTGATAATTTCCGCTGGGTCAGTGATATTAGAGCTCCTCTTTCTCTGTTGGGCCTTC
AACAATATTTGCTGCTTTGGGATTCCTTGAGGGAGGTTCATTTATCACAGGACCCAGATCAACA
TAGATGGAGACGTTATTTCAGGAGTTTTCTCTTCTAAATCATGTTATCAAAGCTTGTTTGCTGG
TTCAACTCCTTTTCAACCGTGGAAAAGACTTTGGAAAACCTGCGCTCCACCAAAATGCAAATTC
TTTCTTTGGTTGGCTATGAAGAATAGATGTTGGACTGCTCACAGATTAGAAAAGAGAGATCTTC
CTCACCCGGTGGTGTACCCCTTATGCGACCAAGAGCAAGAAACAATCCAACACCTCCTAATCTC
CTGCATCTTCGCTCGTCAGTTCTGGCACATCTTGTTATCCCCTTTTGGTTTGGGTCATCTCACG
CCAGTTGTTGATGCTCCTTCCTTCACAGAGTGGTGGAAACGGGTGGAGTGTCATGTGCCCAAAA
GCACAAGAAAGGGGTTTAACAGTGTCATCATCTTAGGGTGGGTGTATTTGGCTTCATCGTAATA
ACTAATAAGGTGGTCTTCGATGGGGATTCCCCTTCGCTGAGAAGGATTCAGGGCCTTGCCGCCT
TGGATCTCGCTAGGGCTTTGAATGTGGCCGGTCCTTAGCCATCTAGACCCTTGGTCTTGTTCTG
TTTTTTTTTGTTGTTTTCTTTTTATTTTTGTTCTTTTGGCAGGAGCTCTGCCTTGTAAAACCCT
TTGGGTTTGTCTCCTTCCCTTTTAATATAAAGATGCGCAGTTCTCCTGCGCGTTCGACGAAAAA
AGAGAAGAATTGTTAATCCTGGTCTCAGAACTGAAATAAGAATGTGTCCCACATGGCCTCATTC
TATATACTCGTGAAGACTCAGGCAGCGACAGGCAAGGCACGACAGGTGGCTGAGATGGGTGCGT
GACGAGCGGACAAGCCAGATGGGCCCATGGGATCGAGACAGCTCAGGAAACAAGGAAAATTTCG
AAAAGAAAAACTTACAACATCACCGCTCCATCGAGCAGCTATATCAAGTGCCTCACCAAGCACG
CCACTAAATTTGGGACGGATTATTGACAGCAAACCATGGCCTCTTCTTTTCTGAAAATTAAGCT
GAAGTTCTGC
						
					

			
		

Sequences
Splice junction sequence	CTATATCAAGTGCCTCACCAAGCACGCCACTAAATTTGGGACGGATTATTGACAGCAAACCATG GCCTCTTCTTTTCTGAAAATTAAGCTGAAGTTCTGCcatggtatccccattgccacctccactg gcatccagagagccacgccaatagcctcttagttcagctaagccaggaaatgctatatcttcca ttgtgtca
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 597 Transcript exons: 9057559-9057690,9057833-9057898,9058011-9058286,9061542- 9061664 CATGGTATCCCCATTGCCACCTCCACTGGCATCCAGAGAGCCACGCCAATAGCCTCTTAGTTCA GCTAAGCCAGGAAATGCTATATCTTCCATTGTGTCATCATCCAACCAATCATGATAAATTTCTA ATGCCTTTAGCTGATCATTAAGACTTTCAGCATTGAACCCAACAGAATGCAGACATTGCATAAA AAGTTCCTTTGATCTCGAACGGATAACTGGGTCTGTACTCCGTGAAAGAAGCCTTGCTAAAGGA AGCATTTCAGCTACTTCAGCACCAGGAACCTCTAGTCTCATCCTCCACCTGCCCATCGAAGACA TTATGCTACCAAGATGCCCTCCCATTGCTTTCTCTATGAACCCATTACTCTGACTTTCCACAGG AAATCTATCACGCGTTCCAGGAAAAACATACTCCCCTTGAACCTCATATTTGCTATTAGCTTGC TCCAGGATAGATTTTTCCATAGTAATAACATCACCGCTCCATCGAGCAGCTATATCAAGTGCCT CACCAAGCACGCCACTAAATTTGGGACGGATTATTGACAGCAAACCATGGCCTCTTCTTTTCTG AAAATTAAGCTGAAGTTCTGC
Genomic sequence	CATGGTATCCCCATTGCCACCTCCACTGGCATCCAGAGAGCCACGCCAATAGCCTCTTAGTTCA GCTAAGCCAGGAAATGCTATATCTTCCATTGTGTCATCATCCAACCAATCATGATAAATTTCTA ATGCCTGGAGCAAGTAACAAGGTAAAGTTTAACATAAATAATCATGTCAATATGAGACCATAAC CATAGCATTAGACTAGATGTCAAAGTATCAAACCATATGCCAATGGATCTACTTGACAACAACA CTAGCTTTAGTACAATACCTTTAGCTGATCATTAAGACTTTCAGCATTGAACCCAACAGAATGC AGACATTGCATAAAAAGTTCCTGAAAACAAAAGGAGGGTTATATGGCACTCTGCCCTCTAATAA TAGACATAAATACCAACATATATTTTATCCAACAGTAGAAAGGCATATTTGAAGGACCAAATGT GTACCTTTGATCTCGAACGGATAACTGGGTCTGTACTCCGTGAAAGAAGCCTTGCTAAAGGAAG CATTTCAGCTACTTCAGCACCAGGAACCTCTAGTCTCATCCTCCACCTGCCCATCGAAGACATT ATGCTACCAAGATGCCCTCCCATTGCTTTCTCTATGAACCCATTACTCTGACTTTCCACAGGAA ATCTATCACGCGTTCCAGGAAAAACATACTCCCCTTGAACCTCATATTTGCTATTAGCTTGCTC CAGGATAGATTTTTCCATAGTAATCTGCGTTTGATATTAAAGAAAAAGGATAGTGAGGGAGAAA GAGAGGGTTCCAAGATACCAAGGTTTTAAAGTCGTCCGAGCTAGTCCGAGCTCGATTAGGGTCT CCGACTCGAGTAGAGTGACTAGATAGCGATTAGTCGTCCAAGTCGCCGACTAATCGCGATTAGT CGTCCAACTAGGGGTTATGGTCGACTAGTTATGCCTGTTTTGGGCCACTAATCCGACCTTTATT ATGTGAGTCGGCCCACCATCTGTACACAACACAAACGTTGTTTTGCCCTATGCCCCTGCTTGTA CCAATACGGTACGCACTGTTGCGCGTGTGCTCTTACCTAGCTCAGCCACCCCTTCTCTAGCGTC GCCGCCCCTTTACCCATCGTCGCCACTCTCCTCTCCTGCCGCCCTGTGGTGCTTTGGTGGCCCT CTGCTCAAGCAGCAGTTGCGCTCCCTCCATCGCGTGTCGGTTGTAGTCTGCAGAGGCCCCCTTC CAGCGTGTTCCCGTCCTCCTCTGTTGTCTGTTTAGAATTCAGAGATTGAGATGAGTACCTCTTC AGACGGTAATTGCTCTGATATTTTGGTTGTTCAATGTTCTATGTTCACTAACTGAGCAGTATTG TGCCCGCCTTGGCCTCCTCTTGAGTTGTGCTTCATTTGATTGTTGTGCCACTACATATGAGAAT AGGAGGCGACGTAATAATGTTGAAATCATCTTCCCAGAATCTGTGTTGCCCCAGCCCTAGAACG ATGGCAGTGGCACTGGTACAGTTCATGCAGTCATGCAGTCCAACTAGGCAGCTACAGATATATA TATTCATATATATTGATATATACACACACACATATTGTCATGTTATAGGTGGACGACTATAGGA CGACTAGGAGTCGACCAGGCTCGACTAATCGAGCAAATCGGCGACTAATCGCGATTAGTCACCT TATCGGTGCTTAGGCGACTAGAGTCGACTAACCGACTTTAAAACTTTGCAAGATACTAAGATAG CAATTAAAAGTAAGACAAAAACCTTGCTAGAAATGGATGAATAATGATAGGAAAAACCTATGGG TGCATGATGCATTCACACCATACACCAATTAATTTGTGCTAACAACTGCAAATTAGTATCACTC CTAGAGATCAAAAGCAGAGTAAAATTGATGATTGCTGAGGGTATATACGTTTAAAGAAGAGTAT GGTCAGAGATTTAGAGCATAATAAGTGACTTGTTTCTACAGTGTGAGCATGTCCCCGATTCTTT GGCTTAGTGAAGGTGATGCCAACATAGAACAGTGGGTGCCTTGCTGCCTGTAGAAAAAAAGGCG GGCATGGCTGGGTGCCTGGGTCGTGAGGCGGCCTCTCCCTGTTGCGTGCCCTTGCACCTAGTGA TTAGGTCATGTCGTGGTCAGTTTATCTTTTTTCACAGGCACAAATGTATATTGAGAACCAAAAT GCTGTGAGTGTTTGTACTTTGGGGTTTCTATTCCTCTCATCATACAACGATACACAGCTCTCCT ATGGTTCCAGAAATTTTGTTTCTACAGTGTGCATATCAGTATACACTTCCAAGGATGTGTTACT AATTATTAGTTATTTTGTATTCCAGAACTCCACTGTATAGATCAATCTAAGTTCCTAGCAGAAA TATCATCGCTTCTATAAAACAGCATGCCTCAAAAGATGGGTAGAGAGGTTTGCAGAGAGGCTTC CAAATTGGAAAGCACACCTCCTTAACCTTGCTGCAGTGCTGCTGGTAGGACAGCTCTTGTGTGT TTTGTTCTTTCAGCAATCCCCATCTACCTTCTCATTGCAATGAATACTCCCAAGTGGGTGATAA AAGAAACTGATAAAATTAGAAGGGGGTTTATTTGGAAAGGAAGGAAGCTGGAGGCAATTGTCTG GTTTCTTGGGAAACAGTTACAAAGTCTATCTCTCTTGGGGGTCTTGGGATCCCTAACCTGCAGT TTAAGAGCTGCGCACTGCAAGCATAGTGGTTATGGCTGGAAAAAACTGACCCAAATAGACCATG GCAGGGTCTTAACATTCCTGTGCAGCAATAGGTCAAAGACTTACTTGCAAAATCTGTGATATCT ATTATTGGGAATGGGTCAGCACGCTGTTCTGGACTGACAATTGGTTGCATGGGGCCGCAATCAG GGACATTGCACCAGAAGTAGCTGCCAAGGTGGGCAAAAGAGCTCTGTCCTCTACAACCGTAGCT CAGGCCCTTGATAATTTCCGCTGGGTCAGTGATATTAGAGCTCCTCTTTCTCTGTTGGGCCTTC AACAATATTTGCTGCTTTGGGATTCCTTGAGGGAGGTTCATTTATCACAGGACCCAGATCAACA TAGATGGAGACGTTATTTCAGGAGTTTTCTCTTCTAAATCATGTTATCAAAGCTTGTTTGCTGG TTCAACTCCTTTTCAACCGTGGAAAAGACTTTGGAAAACCTGCGCTCCACCAAAATGCAAATTC TTTCTTTGGTTGGCTATGAAGAATAGATGTTGGACTGCTCACAGATTAGAAAAGAGAGATCTTC CTCACCCGGTGGTGTACCCCTTATGCGACCAAGAGCAAGAAACAATCCAACACCTCCTAATCTC CTGCATCTTCGCTCGTCAGTTCTGGCACATCTTGTTATCCCCTTTTGGTTTGGGTCATCTCACG CCAGTTGTTGATGCTCCTTCCTTCACAGAGTGGTGGAAACGGGTGGAGTGTCATGTGCCCAAAA GCACAAGAAAGGGGTTTAACAGTGTCATCATCTTAGGGTGGGTGTATTTGGCTTCATCGTAATA ACTAATAAGGTGGTCTTCGATGGGGATTCCCCTTCGCTGAGAAGGATTCAGGGCCTTGCCGCCT TGGATCTCGCTAGGGCTTTGAATGTGGCCGGTCCTTAGCCATCTAGACCCTTGGTCTTGTTCTG TTTTTTTTTGTTGTTTTCTTTTTATTTTTGTTCTTTTGGCAGGAGCTCTGCCTTGTAAAACCCT TTGGGTTTGTCTCCTTCCCTTTTAATATAAAGATGCGCAGTTCTCCTGCGCGTTCGACGAAAAA AGAGAAGAATTGTTAATCCTGGTCTCAGAACTGAAATAAGAATGTGTCCCACATGGCCTCATTC TATATACTCGTGAAGACTCAGGCAGCGACAGGCAAGGCACGACAGGTGGCTGAGATGGGTGCGT GACGAGCGGACAAGCCAGATGGGCCCATGGGATCGAGACAGCTCAGGAAACAAGGAAAATTTCG AAAAGAAAAACTTACAACATCACCGCTCCATCGAGCAGCTATATCAAGTGCCTCACCAAGCACG CCACTAAATTTGGGACGGATTATTGACAGCAAACCATGGCCTCTTCTTTTCTGAAAATTAAGCT GAAGTTCTGC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.159806774

Conservation Information
Conserved circRNAs	NA
PMCS	0.159806774

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							9061627-9057615(+)
9058282-9057561(-)
9057592-9061612(-)
						
						Potential amino acid sequence
						
							MASSFLKIKLKFCHGIPIATSTGIQRATPIAS*(+)
MEKSILEQANSKYEVQGEYVFPGTRDRFPVESQSNGFIEKAMGGHLGSIMSSMGRWRMRLEVPG
AEVAEMLPLARLLSRSTDPVIRSRSKELFMQCLHSVGFNAESLNDQLKALEIYHDWLDDDTMED
IAFPGLAELRGYWRGSLDASGGGNGDTMAELQLNFQKRRGHGLLSIIRPKFSGVLGEALDIAAR
WSGDVITMEKSILEQANSKYEVQGEYVFPGTRDRFPVESQSNGFIEKAMGGHLGSIMSSMGRWR
MRLEVPGAEVAEMLPLARLLSRSTDPVIRSRSKELFMQCLHSVGFNAESLNDQLKALEIYHDWL
DDDTMEDIAFPGLAELRGYWRGSLDASGGGNGDTMAELQLNFQKRRGHGLLSIIRPKFSGVLGE
ALDIAARWSGDVITMEKSILEQANSKYEVQGEYVFPGTRDRFPVESQSNGFIEKAMGGHLGSIM
SSMGRWRMRLEVPGAEVAEMLPLARLLSRSTDPVIRSRSKELFMQCLHSVGFNAESLNDQLKAL
EIYHDWLDDDTMEDIAFPGLAELRGYWRGSLDASGGGNGDTMAELQLNFQKRRGHGLLSIIRPK
FSGVLGEALDIAARWSGDVITMEKSILEQANSKYEVQGEYVFPGTRDRFPVESQSNGFIEKAMG
GHLGSIMSSMGRWRMRLEVPGAEVAEMLPLARLLSRSTDPVIRSRSKELFMQCLHSVGFNAESL
NDQLKALEIYHDWLDDDTMEDIAFPGLAELRGYWRGSLDASGGGNGDTM(-)
MPVEVAMGIPWQNFSLIFRKEEAMVCCQ*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	9061627-9057615(+) 9058282-9057561(-) 9057592-9061612(-)
Potential amino acid sequence	MASSFLKIKLKFCHGIPIATSTGIQRATPIAS(+) MEKSILEQANSKYEVQGEYVFPGTRDRFPVESQSNGFIEKAMGGHLGSIMSSMGRWRMRLEVPG AEVAEMLPLARLLSRSTDPVIRSRSKELFMQCLHSVGFNAESLNDQLKALEIYHDWLDDDTMED IAFPGLAELRGYWRGSLDASGGGNGDTMAELQLNFQKRRGHGLLSIIRPKFSGVLGEALDIAAR WSGDVITMEKSILEQANSKYEVQGEYVFPGTRDRFPVESQSNGFIEKAMGGHLGSIMSSMGRWR MRLEVPGAEVAEMLPLARLLSRSTDPVIRSRSKELFMQCLHSVGFNAESLNDQLKALEIYHDWL DDDTMEDIAFPGLAELRGYWRGSLDASGGGNGDTMAELQLNFQKRRGHGLLSIIRPKFSGVLGE ALDIAARWSGDVITMEKSILEQANSKYEVQGEYVFPGTRDRFPVESQSNGFIEKAMGGHLGSIM SSMGRWRMRLEVPGAEVAEMLPLARLLSRSTDPVIRSRSKELFMQCLHSVGFNAESLNDQLKAL EIYHDWLDDDTMEDIAFPGLAELRGYWRGSLDASGGGNGDTMAELQLNFQKRRGHGLLSIIRPK FSGVLGEALDIAARWSGDVITMEKSILEQANSKYEVQGEYVFPGTRDRFPVESQSNGFIEKAMG GHLGSIMSSMGRWRMRLEVPGAEVAEMLPLARLLSRSTDPVIRSRSKELFMQCLHSVGFNAESL NDQLKALEIYHDWLDDDTMEDIAFPGLAELRGYWRGSLDASGGGNGDTM(-) MPVEVAMGIPWQNFSLIFRKEEAMVCCQ(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020; Ma et al., 2021b

circRNA

Detail information of Zm00001d039612_circ_g.8

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