Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G23080_circ_g.3 |
ID in PlantcircBase | ath_circ_003990 |
Alias | At_ciR1493, AT1G23080_C1 |
Organism | Arabidpsis thaliana |
Position | chr1: 8181858-8182128 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | CIRCexplorer, find_circ, CIRI-full, CIRI2 |
Parent gene | AT1G23080 |
Parent gene annotation |
Auxin efflux carrier component 7 |
Parent gene strand | - |
Alternative splicing | AT1G23080_circ_g.2 |
Support reads | 9/1 |
Tissues | leaf/aerial |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G23080.4:1 AT1G23080.3:1 AT1G23080.2:1 AT1G23080.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.340942972 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | response to drought stress |
Other Information | |
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References | Ye et al., 2015;Chu et al., 2017;Zhang et al., 2019 |