Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os10g0567400_circ_g.1 |
ID in PlantcircBase | osa_circ_008057 |
Alias | NA |
Organism | Oryza sativa |
Position | chr10: 22483044-22483173 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | u-circRNA |
Identification method | circRNA_finder |
Parent gene | Os10g0567400 |
Parent gene annotation |
Similar to Rieske. (Os10t0567400-01);Similar to Isoform 2 of Chl orophyllide a oxygenase, chloroplastic. (Os10t0567400-02);Simila r to Isoform 2 of Chlorophyllide a oxygenase, chloroplastic. (Os 10t0567400-03) |
Parent gene strand | - |
Alternative splicing | Os10g0567200_circ_ag.1 EPlOSAG00000036674_circ_ig.1 Os10g0567300_circ_g.1 Os10g0567300_circ_g.2 Os10g0567300_circ_g.3 Os10g0567400_circ_g.2 Os10g0567400_circ_g.3 Os10g0567400_circ_g.4 Os10g0567400_circ_g.5 Os10g0567400_circ_g.6 Os10g0567400_circ_g.7 Os10g0567400_circ_g.8 Os10g0567400_circ_g.9 Os10g0567400_circ_g.10 Os10g0567400_circ_g.11 |
Support reads | 2 |
Tissues | leaf |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | Os10t0567400-02:1 Os10t0567400-03:1 Os10t0567400-01:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.103205256 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |