Plant Circular RNA Database

Detail information of Zm00001d019907_circ_g.8

			
						 General Information
					
						CircRNA Name
						Zm00001d019907_circ_g.8
					
						ID in PlantcircBase
						zma_circ_009290
					
						Alias
						Zm07circ00040
					
						Organism
						
							Zea mays						
					
						Position
						
							chr7: 74638485-74643388  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Zm00001d019907						
					
						Parent gene annotation
						
							Histone-lysine N-methyltransferase ATX2
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d019907_circ_g.1 Zm00001d019907_circ_g.2 Zm00001d019907_circ_g.3 Zm00001d019907_circ_g.4 Zm00001d019907_circ_g.5 Zm00001d019907_circ_g.6 Zm00001d019907_circ_g.7 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d019907_T002:10
Zm00001d019907_T043:10
Zm00001d019907_T003:10
Zm00001d019907_T032:10
Zm00001d019907_T005:10
Zm00001d019907_T004:10
Zm00001d019907_T020:10
Zm00001d019907_T035:10
Zm00001d019907_T024:10
Zm00001d019907_T029:10
Zm00001d019907_T041:10
Zm00001d019907_T042:10
Zm00001d019907_T012:10
Zm00001d019907_T015:10
Zm00001d019907_T046:10
Zm00001d019907_T001:10
Zm00001d019907_T006:10
Zm00001d019907_T044:10
Zm00001d019907_T018:10
Zm00001d019907_T028:10
Zm00001d019907_T031:10
Zm00001d019907_T034:10
Zm00001d019907_T025:10
Zm00001d019907_T013:10
Zm00001d019907_T033:2
Zm00001d019907_T009:10
Zm00001d019907_T022:10
Zm00001d019907_T036:10
Zm00001d019907_T016:10
Zm00001d019907_T039:10
Zm00001d019907_T047:10
Zm00001d019907_T019:10

General Information
CircRNA Name	Zm00001d019907_circ_g.8
ID in PlantcircBase	zma_circ_009290
Alias	Zm07circ00040
Organism	Zea mays
Position	chr7: 74638485-74643388 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2
Parent gene	Zm00001d019907
Parent gene annotation	Histone-lysine N-methyltransferase ATX2
Parent gene strand	-
Alternative splicing	Zm00001d019907_circ_g.1 Zm00001d019907_circ_g.2 Zm00001d019907_circ_g.3 Zm00001d019907_circ_g.4 Zm00001d019907_circ_g.5 Zm00001d019907_circ_g.6 Zm00001d019907_circ_g.7
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d019907_T002:10 Zm00001d019907_T043:10 Zm00001d019907_T003:10 Zm00001d019907_T032:10 Zm00001d019907_T005:10 Zm00001d019907_T004:10 Zm00001d019907_T020:10 Zm00001d019907_T035:10 Zm00001d019907_T024:10 Zm00001d019907_T029:10 Zm00001d019907_T041:10 Zm00001d019907_T042:10 Zm00001d019907_T012:10 Zm00001d019907_T015:10 Zm00001d019907_T046:10 Zm00001d019907_T001:10 Zm00001d019907_T006:10 Zm00001d019907_T044:10 Zm00001d019907_T018:10 Zm00001d019907_T028:10 Zm00001d019907_T031:10 Zm00001d019907_T034:10 Zm00001d019907_T025:10 Zm00001d019907_T013:10 Zm00001d019907_T033:2 Zm00001d019907_T009:10 Zm00001d019907_T022:10 Zm00001d019907_T036:10 Zm00001d019907_T016:10 Zm00001d019907_T039:10 Zm00001d019907_T047:10 Zm00001d019907_T019:10

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AGTCCAGATCTTTCCAATTAACCTGAACCGCTCTATAACCCAGGATAGTGTCCCCACCATTCTC
AAAATATTTCAAACATGACCTTGCATTGGGCAGTTCcatatctccggccttgtgtgcaaccttg
gcaaagacaccatatccatgaatttttgattttcctatcaaaagacaatacaatcaatatatga
tgaacatt

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CATATCTCCGGCCTTGTGTGCAACCTTGGCAAAGACACCATATCCATGAATTTTTGATTTTCCT
ATCAAAAGACAATACAATCAATATATGATGAACATTTCACTGAAGTACAAGTGAATATCATAAC
ATTGCCAAATTGTTTCATTCAAATCCAACAATTCAACAAAATAGAATACCATAGTTCTGATATT
CCTATGCAGGGGCAATACAGATCACATCCTCAAAATCATAAAACAATCCCTACCCCGATCTGTA
ATACTCACAGCTGGTACAAACTAAATCCAATTCCACTACAGACTATCACCCAATTTAACATTAG
ACTTTAAGCAACAAAAAAGTGAAAGATTTGTATCAATAAAATTTTCAATCTATTGCTATAAACT
CCACTGCTACTGCAGACAAAAAATGTGTCCATCATTGACAAAGCACAGATATTGATAAATGGTA
TAGAAGAAGCAATGTGTGAAATAGGACAAAAGCTTCCTCCCTTGAAACAACACAACATATTCAG
GAAAAAGATATGTTTTTCTAGTAAAAATAAATTGGAGACAGGAAAAACACAAGTGATTAAGATT
ACAAAACTAGTATCTTATCTTGGCTCAGAACGTATTTCCTGGAAAATGGTATGAAGACTTGACC
AACTCCAGAAGATATGGAAATACAAAAGGATAAGAAACCGAATAGAACTCACCAAAAGTTAGTC
TCTTCCTAAATGTAGCCTTCACGATTGTATATTTTTCAACCATAGAAGACACATTGCCAATAGC
TTCTTGCTGCACAGCATCTGACAAACCAAACGGTTGAATTGATTCTCCGCATGTATTGCCTACT
CTGTTTTGGCAGTAGCCACTGACAATATGAGGTCTATTCTCCACATATAAACGTTTCAGAGAAG
CAGTAGCGACAACTTGTGGCTGCTTTTGGCCCCTTCTCCTGTGTAAATTATAGGGTTCTGGCCA
AGGAACAGGGAATTAAGATATGAAATAAATATGAACAAGATAGGTAATCAATCTAAACAGGGTA
ATCTTTAGTAAAATAAAAAAATATTAAATTTATATCATATGCATAAAAATGCAGCTTCAATCAA
GATGGCACTGCAAGGAATCGACGATATTAACCAGCAAACCTACACCATAACAACACCTGAACAA
CAACCCCTTAAGTAAATAAAAGGTCAAAGTCCAAATTACTCCCCACACCTATGGACAATGTTCA
CATAACCCCCTAAAGTATTTTTTTTAGTTTATTTTACTTCACTACTTTGAGCTGGTTCAATTTA
ACCCTTAAATAAATTTATATTTTTTCATTTCTTTATGTACAAACTGAGTTTTCAGTTCAAAATT
CAAATTTTGTTGGTTAGTAGCTAATAACATATTTTAGCCTAAAAATATATTATGAATTTTTATA
ATAATTTTGATAGGTTATGCATCATATAAAATAATAACTTTAATGATACAAAACTAAATATGAA
ATAATGATGAAAAAAATTTAACATATTTTTCTAACATAAGTTATGATGTTTTCAATGACTTCGA
AAAATATTAACTTGAAATTTAACTTTTACGTGGAGAAACAAAAAACAAATCTCCCCCTAGTAAG
ATCTACCTTTTTGTCTCCACAATCCACATACTATTGTTCATCATTATTTCATATTTAGTTTCGT
ACTTATTAGACTAGAAAACCTAACCCTAACTAGGGTTGGGATATATATTTATATAGAACATTTG
AGCCTAAGCCCATTACACAAAACAACCCATACAGTCGCAACTCTAGCCACGGCAAATGTTAAGA
CTGGACCGAAGCTCCTCAAACACCGACGTAGGGAGGCCCAAATGTCGACGAACTAAGAAGTGGT
CGGGACATGAAGTACTCGCACATCACGGACGACGACACGCTCGCGAACGAAGTGGAGATCGAGC
TCAACATGCTTAGTGCGCTGATGTTGGACTAGGTAGGTGGAGAGGTACATGGCGCTGACGTTGT
CACAGTAGACAAGAGTGGTCAGCGGACTGTGCATCTCCTGGAGAAGCTAAACAAGCCACGAATG
TGCCCCGAAGAAATAGGTCATCACGTAGGGAGAAGCGCACACGGTAGGGAGGCATGTAAACCAC
GTCGGAGCGAAGGAAGGGTGGTGAGGGCACGACGGTACTCGCGGGGCCAAGACGGCGTGCAGCC
GGCGCGGTAGAGGGTGGCGGATGCACGACGGCCTCAGTAGCGAGCCCATGGGCGATGAAGGGGC
CCCCATCCACGGCAACAAGCCCATCGGAGATGGGTGTGACGAGGAGGGTGGGTAGCGCGAGCGT
GCCCGCGTGGACACCTGGGAGGGACAGCATAGCAGCGCGGATGACAAAGAGGGGTAACGCGGCG
ATGGCAGCAGCGTCGGGTGCCACGGCGGTGCAAGTCCAAGCGGACGCGGGCGCGGGCGTGGAGA
GGACGATCGCGACAGCACCGAGGTTGGCGAGGAGGGAGCACAGGGTTGTCCGCGGAGGAGAGGC
ACCAGGGTCGTGGCGACCGACCGAGAGAAGAGTCCGTGTTGTGGCACCCTGGTTGTTCCTTCTC
AAAGCACCCGCTACAAAAATGCATTGGGTTTAGGTAGATGACTGGTGGTAGTAGTGGCAATGGC
ATGCACTGCAGCTCCACACTGTCTTAATGGAGTATTCTTGGTCGCTCTCTAGCAACGACCAGCG
AAGTGCGAACGAATGATGCAAGCAAGGGCGAACGGGCACGCAACGAGATGTGGTCCTCTCGACT
TGGGCCGTCGTAGGGAGAGGGGTGGCAGTCCAGCGATCAACCGTTGGAGAACACCGGCGGGCAC
GGGCCGAGCAGAGCCGCGCCAGAGTCTAGGAGCCGACAAAGAGGGGCCGCGGGGGAGCGGATAT
CGGGAGGCGGCGCTCGGAGTGGGAAGCGCGGGCGCGGGGGAGCCGACCACGCGCGTCGGGGGCG
AGGCTAGGCACGAGGGGGGGCGGCAGCCCAGTTACTGTAGCCGGCAACGGCAATAGTGGGGGCT
AAGGATGGGGAGGGGATGAAGAAGACTAATCCTAGTTGTAGATACCATATTAGAGTAGAAACCC
TAACTAGGGTTGGAAAATATATTTATATAGAACAATTGGGCCTAAGCCCAATACAAAAAGTCAG
CCCATTACAATAGGAGAAGCACAACAACTCTAACAGTACTATTAAAGTTATTACCTTATCTGAT
CCCTAACCTATCAAAATAATTATAAAAATCGTAATATATTTTCTAGGCTAAATTATGCTATTAG
CTACTAACCAACAAAATTTGAACTGAAAACTCAGTTTGTACATAAATAAATAAAAAATACATAT
TTTTTTAAGGGGTAAATTGAACCAACTCAAAGGAGTAGAGGGGTAAAATAAACTAAAAATACTT
TAGTTGGTTATGTGAACATTGTCCAGTGAGGGGAGTAAATTGGACTTTTTCCTAAATAAAACAT
GGGGCCAAAAAAATATAATTAATATCATTGTGAGGTGATTTTTTAATGCAGATTAAACTTTGCA
TACAGAGAACAATAAGAAGCTCCATGTCCTTGTCAAATTAGCAGTGCTTGTTCTCTTACCGGTC
CTTGCACAACCAGATGATGAAGCCATATCTGTCTGAACTACCTGAATGGGTTCAGGAGGATCAC
TTTCTAAAGATGGACGTTCAGCAGCAGAAGGCTGTCTATGCTTTTTGCAGTACGAGAGTAAACG
AATACAAGGATCCTCGTCTTCATCAAGATACATGTGATGGATTTTGTCATCATTTTCAAGCTAA
TATTAACGAAACAGGTCCCCATAATGGAAATGCATGTTAGTCGAGGCAAAAAAAAAGTAATCAT
TGAGTAAATAACCTGAAGAAAAAAGACTAGTTCGGTACCTCAATGCAAAGGTCAGCAGCACGTG
CACAAAGAGGGTGATACGCAACACGACAGGTAGGATGAGAACACTATGTTGATACAAGAAGAGT
TATAACATGTTTTAATCATCATAACAGTAGATTCAACCAACTGTAAAGTACCTGTATACAAACT
CCATATGAAACTCCGCAAATGCTGCATACAAGTTTCCAACGGTCCTGCAATGACAAACTACAAT
GATGAGCAATGATGTTTCTACAGAAGTACTAAAAGATTGAAATAAGCAGTTCACACCAAAAGAC
AGAGGTTGACCTTGTTGATTCTGCTCAGTCCATCAATAGGTTCCATTCTCTTTACATCCTTTAA
GCATGTTTCTGTGACAGAATAACAGATTGAGAAAACTAAAAGCATGTTACGTCACAACATCAAG
ATGATTTAGGACAAATGATTACCAGGGATCCATATAGCACATGCGAGATGAGCCCAACGGCCAT
CTGTTGTAGGTTTCATTGCACCACCTAAAGAATGTTTTACAACCCATTAGTAATATACTAATAT
TTCATTATGCATTGATGTGGGATGAAAGTCTGTACCTGTGACTGGACATAGACAGCATTTTGGA
GACACACGAGGTGCACCTGGTCGACACAAGTTGCAAAGCCAAAGTCCTCCATCCAATTGTTTAA
GTTCACCATAACATCTAGCATGAACCTGGATCATGTTTTAAGGCATTTGGAAACACTTCCACAT
TCAATAACCTGGGCTAAGCAAGAAAGGCTTTCATACCATCATACGACACTTGTCACATTGCAAG
AATAAGTTGTCTTCATACTCCTAGATGCAAAACAAAGATCAGTAAGTTTCAGATTGATTATAAC
CTAGGGAATAACCTATGTAGGAACAGGAACAAGATTGCTTACCTCATCCATATCACAAACATTG
CAATAGTCCAGATCTTTCCAATTAACCTGAACCGCTCTATAACCCAGGATAGTGTCCCCACCAT
TCTCAAAATATTTCAAACATGACCTTGCATTGGGCAGTTC
						
					

			
		

Sequences
Splice junction sequence	AGTCCAGATCTTTCCAATTAACCTGAACCGCTCTATAACCCAGGATAGTGTCCCCACCATTCTC AAAATATTTCAAACATGACCTTGCATTGGGCAGTTCcatatctccggccttgtgtgcaaccttg gcaaagacaccatatccatgaatttttgattttcctatcaaaagacaatacaatcaatatatga tgaacatt
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CATATCTCCGGCCTTGTGTGCAACCTTGGCAAAGACACCATATCCATGAATTTTTGATTTTCCT ATCAAAAGACAATACAATCAATATATGATGAACATTTCACTGAAGTACAAGTGAATATCATAAC ATTGCCAAATTGTTTCATTCAAATCCAACAATTCAACAAAATAGAATACCATAGTTCTGATATT CCTATGCAGGGGCAATACAGATCACATCCTCAAAATCATAAAACAATCCCTACCCCGATCTGTA ATACTCACAGCTGGTACAAACTAAATCCAATTCCACTACAGACTATCACCCAATTTAACATTAG ACTTTAAGCAACAAAAAAGTGAAAGATTTGTATCAATAAAATTTTCAATCTATTGCTATAAACT CCACTGCTACTGCAGACAAAAAATGTGTCCATCATTGACAAAGCACAGATATTGATAAATGGTA TAGAAGAAGCAATGTGTGAAATAGGACAAAAGCTTCCTCCCTTGAAACAACACAACATATTCAG GAAAAAGATATGTTTTTCTAGTAAAAATAAATTGGAGACAGGAAAAACACAAGTGATTAAGATT ACAAAACTAGTATCTTATCTTGGCTCAGAACGTATTTCCTGGAAAATGGTATGAAGACTTGACC AACTCCAGAAGATATGGAAATACAAAAGGATAAGAAACCGAATAGAACTCACCAAAAGTTAGTC TCTTCCTAAATGTAGCCTTCACGATTGTATATTTTTCAACCATAGAAGACACATTGCCAATAGC TTCTTGCTGCACAGCATCTGACAAACCAAACGGTTGAATTGATTCTCCGCATGTATTGCCTACT CTGTTTTGGCAGTAGCCACTGACAATATGAGGTCTATTCTCCACATATAAACGTTTCAGAGAAG CAGTAGCGACAACTTGTGGCTGCTTTTGGCCCCTTCTCCTGTGTAAATTATAGGGTTCTGGCCA AGGAACAGGGAATTAAGATATGAAATAAATATGAACAAGATAGGTAATCAATCTAAACAGGGTA ATCTTTAGTAAAATAAAAAAATATTAAATTTATATCATATGCATAAAAATGCAGCTTCAATCAA GATGGCACTGCAAGGAATCGACGATATTAACCAGCAAACCTACACCATAACAACACCTGAACAA CAACCCCTTAAGTAAATAAAAGGTCAAAGTCCAAATTACTCCCCACACCTATGGACAATGTTCA CATAACCCCCTAAAGTATTTTTTTTAGTTTATTTTACTTCACTACTTTGAGCTGGTTCAATTTA ACCCTTAAATAAATTTATATTTTTTCATTTCTTTATGTACAAACTGAGTTTTCAGTTCAAAATT CAAATTTTGTTGGTTAGTAGCTAATAACATATTTTAGCCTAAAAATATATTATGAATTTTTATA ATAATTTTGATAGGTTATGCATCATATAAAATAATAACTTTAATGATACAAAACTAAATATGAA ATAATGATGAAAAAAATTTAACATATTTTTCTAACATAAGTTATGATGTTTTCAATGACTTCGA AAAATATTAACTTGAAATTTAACTTTTACGTGGAGAAACAAAAAACAAATCTCCCCCTAGTAAG ATCTACCTTTTTGTCTCCACAATCCACATACTATTGTTCATCATTATTTCATATTTAGTTTCGT ACTTATTAGACTAGAAAACCTAACCCTAACTAGGGTTGGGATATATATTTATATAGAACATTTG AGCCTAAGCCCATTACACAAAACAACCCATACAGTCGCAACTCTAGCCACGGCAAATGTTAAGA CTGGACCGAAGCTCCTCAAACACCGACGTAGGGAGGCCCAAATGTCGACGAACTAAGAAGTGGT CGGGACATGAAGTACTCGCACATCACGGACGACGACACGCTCGCGAACGAAGTGGAGATCGAGC TCAACATGCTTAGTGCGCTGATGTTGGACTAGGTAGGTGGAGAGGTACATGGCGCTGACGTTGT CACAGTAGACAAGAGTGGTCAGCGGACTGTGCATCTCCTGGAGAAGCTAAACAAGCCACGAATG TGCCCCGAAGAAATAGGTCATCACGTAGGGAGAAGCGCACACGGTAGGGAGGCATGTAAACCAC GTCGGAGCGAAGGAAGGGTGGTGAGGGCACGACGGTACTCGCGGGGCCAAGACGGCGTGCAGCC GGCGCGGTAGAGGGTGGCGGATGCACGACGGCCTCAGTAGCGAGCCCATGGGCGATGAAGGGGC CCCCATCCACGGCAACAAGCCCATCGGAGATGGGTGTGACGAGGAGGGTGGGTAGCGCGAGCGT GCCCGCGTGGACACCTGGGAGGGACAGCATAGCAGCGCGGATGACAAAGAGGGGTAACGCGGCG ATGGCAGCAGCGTCGGGTGCCACGGCGGTGCAAGTCCAAGCGGACGCGGGCGCGGGCGTGGAGA GGACGATCGCGACAGCACCGAGGTTGGCGAGGAGGGAGCACAGGGTTGTCCGCGGAGGAGAGGC ACCAGGGTCGTGGCGACCGACCGAGAGAAGAGTCCGTGTTGTGGCACCCTGGTTGTTCCTTCTC AAAGCACCCGCTACAAAAATGCATTGGGTTTAGGTAGATGACTGGTGGTAGTAGTGGCAATGGC ATGCACTGCAGCTCCACACTGTCTTAATGGAGTATTCTTGGTCGCTCTCTAGCAACGACCAGCG AAGTGCGAACGAATGATGCAAGCAAGGGCGAACGGGCACGCAACGAGATGTGGTCCTCTCGACT TGGGCCGTCGTAGGGAGAGGGGTGGCAGTCCAGCGATCAACCGTTGGAGAACACCGGCGGGCAC GGGCCGAGCAGAGCCGCGCCAGAGTCTAGGAGCCGACAAAGAGGGGCCGCGGGGGAGCGGATAT CGGGAGGCGGCGCTCGGAGTGGGAAGCGCGGGCGCGGGGGAGCCGACCACGCGCGTCGGGGGCG AGGCTAGGCACGAGGGGGGGCGGCAGCCCAGTTACTGTAGCCGGCAACGGCAATAGTGGGGGCT AAGGATGGGGAGGGGATGAAGAAGACTAATCCTAGTTGTAGATACCATATTAGAGTAGAAACCC TAACTAGGGTTGGAAAATATATTTATATAGAACAATTGGGCCTAAGCCCAATACAAAAAGTCAG CCCATTACAATAGGAGAAGCACAACAACTCTAACAGTACTATTAAAGTTATTACCTTATCTGAT CCCTAACCTATCAAAATAATTATAAAAATCGTAATATATTTTCTAGGCTAAATTATGCTATTAG CTACTAACCAACAAAATTTGAACTGAAAACTCAGTTTGTACATAAATAAATAAAAAATACATAT TTTTTTAAGGGGTAAATTGAACCAACTCAAAGGAGTAGAGGGGTAAAATAAACTAAAAATACTT TAGTTGGTTATGTGAACATTGTCCAGTGAGGGGAGTAAATTGGACTTTTTCCTAAATAAAACAT GGGGCCAAAAAAATATAATTAATATCATTGTGAGGTGATTTTTTAATGCAGATTAAACTTTGCA TACAGAGAACAATAAGAAGCTCCATGTCCTTGTCAAATTAGCAGTGCTTGTTCTCTTACCGGTC CTTGCACAACCAGATGATGAAGCCATATCTGTCTGAACTACCTGAATGGGTTCAGGAGGATCAC TTTCTAAAGATGGACGTTCAGCAGCAGAAGGCTGTCTATGCTTTTTGCAGTACGAGAGTAAACG AATACAAGGATCCTCGTCTTCATCAAGATACATGTGATGGATTTTGTCATCATTTTCAAGCTAA TATTAACGAAACAGGTCCCCATAATGGAAATGCATGTTAGTCGAGGCAAAAAAAAAGTAATCAT TGAGTAAATAACCTGAAGAAAAAAGACTAGTTCGGTACCTCAATGCAAAGGTCAGCAGCACGTG CACAAAGAGGGTGATACGCAACACGACAGGTAGGATGAGAACACTATGTTGATACAAGAAGAGT TATAACATGTTTTAATCATCATAACAGTAGATTCAACCAACTGTAAAGTACCTGTATACAAACT CCATATGAAACTCCGCAAATGCTGCATACAAGTTTCCAACGGTCCTGCAATGACAAACTACAAT GATGAGCAATGATGTTTCTACAGAAGTACTAAAAGATTGAAATAAGCAGTTCACACCAAAAGAC AGAGGTTGACCTTGTTGATTCTGCTCAGTCCATCAATAGGTTCCATTCTCTTTACATCCTTTAA GCATGTTTCTGTGACAGAATAACAGATTGAGAAAACTAAAAGCATGTTACGTCACAACATCAAG ATGATTTAGGACAAATGATTACCAGGGATCCATATAGCACATGCGAGATGAGCCCAACGGCCAT CTGTTGTAGGTTTCATTGCACCACCTAAAGAATGTTTTACAACCCATTAGTAATATACTAATAT TTCATTATGCATTGATGTGGGATGAAAGTCTGTACCTGTGACTGGACATAGACAGCATTTTGGA GACACACGAGGTGCACCTGGTCGACACAAGTTGCAAAGCCAAAGTCCTCCATCCAATTGTTTAA GTTCACCATAACATCTAGCATGAACCTGGATCATGTTTTAAGGCATTTGGAAACACTTCCACAT TCAATAACCTGGGCTAAGCAAGAAAGGCTTTCATACCATCATACGACACTTGTCACATTGCAAG AATAAGTTGTCTTCATACTCCTAGATGCAAAACAAAGATCAGTAAGTTTCAGATTGATTATAAC CTAGGGAATAACCTATGTAGGAACAGGAACAAGATTGCTTACCTCATCCATATCACAAACATTG CAATAGTCCAGATCTTTCCAATTAACCTGAACCGCTCTATAACCCAGGATAGTGTCCCCACCAT TCTCAAAATATTTCAAACATGACCTTGCATTGGGCAGTTC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.09886007

Conservation Information
Conserved circRNAs	NA
PMCS	0.09886007

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							74643368-74639194(+)
74643273-74638487(-)
74638533-74643363(-)
						
					

						Potential amino acid sequence
						
							MTLHWAVPYLRPCVQPWQRHHIHEFLIFQKLVSS*(+)
MDEEYEDNLFLQCDKCRMMVHARCYGELKQLDGGLWLCNLCRPGAPRVSPKCCLCPVTGGAMKP
TTDGRWAHLACAIWIPETCLKDVKRMEPIDGLSRINKDRWKLVCSICGVSYGVCIQCSHPTCRV
AYHPLCARAADLCIELENDDKIHHMYLDEDEDPCIRLLSYCKKHRQPSAAERPSLESDPPEPIQ
VVQTDMASSSGCARTEPYNLHRRRGQKQPQVVATASLKRLYVENRPHIVSGYCQNRVGNTCGES
IQPFGLSDAVQQEAIGNVSSMVEKYTIVKATFRKRLTFGKSKIHGYGVFAKVAHKAGDMELPNA
RSCLKYFENGGDTILGYRAVQVNWKDLDYCNVCDMDEEYEDNLFLQCDKCRMMVHARCYGELKQ
LDGGLWLCNLCRPGAPRVSPKCCLCPVTGGAMKPTTDGRWAHLACAIWIPETCLKDVKRMEPID
GLSRINKDRWKLVCSICGVSYGVCIQCSHPTCRVAYHPLCARAADLCIELENDDKIHHMYLDED
EDPCIRLLSYCKKHRQPSAAERPSLESDPPEPIQVVQTDMASSSGCARTEPYNLHRRRGQKQPQ
VVATASLKRLYVENRPHIVSGYCQNRVGNTCGESIQPFGLSDAVQQEAIGNVSSMVEKYTIVKA
TFRKRLTFGKSKIHGYGVFAKVAHKAGDMELPNARSCLKYFENGGDTILGYRAVQVNWKDLDYC
NVCDMDEEYEDNLFLQCDKCRMMVHARCYGELKQLDGGLWLCNLCRPGAPRVSPKCCLCPVTGG
AMKPTTDGRWAHLACAIWIPETCLKDVKRMEPIDGLSRINKDRWKLVCSICGVSYGVCIQCSHP
TCRVAYHPLCARAADLCIELENDDKIHHMYLDEDEDPCIRLLSYCKKHRQPSAAERPSLESDPP
EPIQVVQTDMASSSGCARTEPYNLHRRRGQKQPQVVATASLKRLYVENRPHIVSGYCQNRVGNT
CGESIQPFGLSDAVQQEAIGNVSSMVEKYTIVKATFRKRLTFGKSKIHGYGVFAKVAHKAGDME
LPNARSCLKYFENGGDTILGYRAVQVNWKDLDYCNVCDMDEEYEDNLFLQCDKCRMMVHARCYG
ELKQLDGGLWLCNLCRPGAPRVSPKCCLCPVTGGAMKPTTDGRWAHLACAIWIPETCLKDVKRM
EPIDGLSRINKDRWKLVCSICGVSYGVCIQCSHPTCRVAYHPLCARAADLCIELENDDKIHHMY
LDEDEDPCIRLLSYCKKHRQPSAAERPSLESDPPEPIQVVQTDMASSSGCARTEPYNLHRRRGQ
KQPQVVATASLKRLYVENRPHIVSGYCQNRVGNTCGESIQPFGLSDAVQQEAIGNVSSMVEKYT
IVKATFRKRLTFGKSKIHGYGVFAKVAHKAGDM(-)
MDMVSLPRLHTRPEIWNCPMQGHV*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	74643368-74639194(+) 74643273-74638487(-) 74638533-74643363(-)
Potential amino acid sequence	MTLHWAVPYLRPCVQPWQRHHIHEFLIFQKLVSS(+) MDEEYEDNLFLQCDKCRMMVHARCYGELKQLDGGLWLCNLCRPGAPRVSPKCCLCPVTGGAMKP TTDGRWAHLACAIWIPETCLKDVKRMEPIDGLSRINKDRWKLVCSICGVSYGVCIQCSHPTCRV AYHPLCARAADLCIELENDDKIHHMYLDEDEDPCIRLLSYCKKHRQPSAAERPSLESDPPEPIQ VVQTDMASSSGCARTEPYNLHRRRGQKQPQVVATASLKRLYVENRPHIVSGYCQNRVGNTCGES IQPFGLSDAVQQEAIGNVSSMVEKYTIVKATFRKRLTFGKSKIHGYGVFAKVAHKAGDMELPNA RSCLKYFENGGDTILGYRAVQVNWKDLDYCNVCDMDEEYEDNLFLQCDKCRMMVHARCYGELKQ LDGGLWLCNLCRPGAPRVSPKCCLCPVTGGAMKPTTDGRWAHLACAIWIPETCLKDVKRMEPID GLSRINKDRWKLVCSICGVSYGVCIQCSHPTCRVAYHPLCARAADLCIELENDDKIHHMYLDED EDPCIRLLSYCKKHRQPSAAERPSLESDPPEPIQVVQTDMASSSGCARTEPYNLHRRRGQKQPQ VVATASLKRLYVENRPHIVSGYCQNRVGNTCGESIQPFGLSDAVQQEAIGNVSSMVEKYTIVKA TFRKRLTFGKSKIHGYGVFAKVAHKAGDMELPNARSCLKYFENGGDTILGYRAVQVNWKDLDYC NVCDMDEEYEDNLFLQCDKCRMMVHARCYGELKQLDGGLWLCNLCRPGAPRVSPKCCLCPVTGG AMKPTTDGRWAHLACAIWIPETCLKDVKRMEPIDGLSRINKDRWKLVCSICGVSYGVCIQCSHP TCRVAYHPLCARAADLCIELENDDKIHHMYLDEDEDPCIRLLSYCKKHRQPSAAERPSLESDPP EPIQVVQTDMASSSGCARTEPYNLHRRRGQKQPQVVATASLKRLYVENRPHIVSGYCQNRVGNT CGESIQPFGLSDAVQQEAIGNVSSMVEKYTIVKATFRKRLTFGKSKIHGYGVFAKVAHKAGDME LPNARSCLKYFENGGDTILGYRAVQVNWKDLDYCNVCDMDEEYEDNLFLQCDKCRMMVHARCYG ELKQLDGGLWLCNLCRPGAPRVSPKCCLCPVTGGAMKPTTDGRWAHLACAIWIPETCLKDVKRM EPIDGLSRINKDRWKLVCSICGVSYGVCIQCSHPTCRVAYHPLCARAADLCIELENDDKIHHMY LDEDEDPCIRLLSYCKKHRQPSAAERPSLESDPPEPIQVVQTDMASSSGCARTEPYNLHRRRGQ KQPQVVATASLKRLYVENRPHIVSGYCQNRVGNTCGESIQPFGLSDAVQQEAIGNVSSMVEKYT IVKATFRKRLTFGKSKIHGYGVFAKVAHKAGDM(-) MDMVSLPRLHTRPEIWNCPMQGHV(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020

circRNA

Detail information of Zm00001d019907_circ_g.8

Address

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