Plant Circular RNA Database

Detail information of Zm00001d018060_circ_g.4

			
						 General Information
					
						CircRNA Name
						Zm00001d018060_circ_g.4
					
						ID in PlantcircBase
						zma_circ_008813
					
						Alias
						Zm05circ00128, GRMZM2G070045_C2
					
						Organism
						
							Zea mays						
					
						Position
						
							chr5: 213515272-213519786  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Zm00001d018060						
					
						Parent gene annotation
						
							Exocyst complex component SEC6
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d018060_circ_g.1 Zm00001d018060_circ_g.2 Zm00001d018060_circ_g.3 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d018060_T012:5
Zm00001d018060_T004:3
Zm00001d018060_T002:5
Zm00001d018060_T006:5
Zm00001d018060_T013:5
Zm00001d018060_T008:4
Zm00001d018060_T011:5
Zm00001d018060_T005:4
Zm00001d018060_T010:5
Zm00001d018060_T003:5
Zm00001d018060_T014:5
Zm00001d018060_T009:5
Zm00001d018060_T015:5

General Information
CircRNA Name	Zm00001d018060_circ_g.4
ID in PlantcircBase	zma_circ_008813
Alias	Zm05circ00128, GRMZM2G070045_C2
Organism	Zea mays
Position	chr5: 213515272-213519786 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2
Parent gene	Zm00001d018060
Parent gene annotation	Exocyst complex component SEC6
Parent gene strand	-
Alternative splicing	Zm00001d018060_circ_g.1 Zm00001d018060_circ_g.2 Zm00001d018060_circ_g.3
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d018060_T012:5 Zm00001d018060_T004:3 Zm00001d018060_T002:5 Zm00001d018060_T006:5 Zm00001d018060_T013:5 Zm00001d018060_T008:4 Zm00001d018060_T011:5 Zm00001d018060_T005:4 Zm00001d018060_T010:5 Zm00001d018060_T003:5 Zm00001d018060_T014:5 Zm00001d018060_T009:5 Zm00001d018060_T015:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AAATAAATTTTATTTGGAAAATATATTCATTGACAATTTTATATTAAAGCAAAAATTGAAGAAT
GAGATGTACCTCAAAGCTCGAACCAATGTCTGAGGActaggaggaaagcatggtgcaacataat
catatatatcgccaagctcatctccaatctgtgttgcaatagaagcaaagtagcaagctataag
ccaaaaag

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTAGGAGGAAAGCATGGTGCAACATAATCATATATATCGCCAAGCTCATCTCCAATCTGTGTTG
CAATAGAAGCAAAGTAGCAAGCTATAAGCCAAAAAGATTGATAAGGTAAACCAAGGTAAGTACA
TTTTCTAAAAAAACATCAGGTACTTCTTTTTACACCCCGAATTACAGAGCCAGTAGGATGGTGA
GTCCCCCCCCCAAAAAAAAATCACATGTGCGCATTAGTCACAAAAGAAAGGTGGCAACCACTTC
TAAGCTCGCTTGTCACATGTTATGCCTATATATATTTAGATTTGTTATATGGAAATAGTATGCA
TAAATTGTCTTGAGATGCACCTAATATCACAATTAATTTGGTTTTCCACATATATAATGAGCAA
AATTGTTTTGGGGCCCATGTCTGTTCAAAACAGTACTCTTTTCTGTGACGAGGAATATTTATAG
AGAAGACCAACAACAACATTTCCCCTCATGCATGACAAATAGGTTTTAATTAGCTGATAGTATT
ATATGGTCCAGTCTGAACTGTGAATTTTTGTGTAACAGGTTAGTAACACTAATTAGCAAACATG
TGTTGAGCATGACAGCTTCACCGTCATGAATCATGTAACTCATAAGTCTAGAACTCACAGAAGT
GCATTCAATCAATCAATAACCAAAACTAAGAAATAGAGTTCTTACAGCTTTGGCTTCCTCCAAA
GCTTCCATCAAGTCCTCCACAAAAACAAGCTGCATGATGAAAATATTAGCTACTGCTGTTCATG
AATTGCAATACTAGATCCTAAAATCCAGGATTGACTCAAGTAATACCTCAGTAAGCAACTTGTT
GAAGCGGGCCTCAACAGCCATCCTGATAGACTCATAGCATTTGTCCTTGTAGCCCTTTCCCTGA
ACCTTCGATTTTTCTTGAGTGCCCTTTCTTGGGGTAACTGTTGCCCCTGCACCTTTTCTGCTAG
CAATGGGAAGGCCAGCAAAAAATCACTGGTAACCTGATAAGAGGTTTCCTTTGGGCTGGAAAGG
AAATTGCTAATAGGGGGGGGATGTTTAATGGCCTGGTATAAAGTTACGAGACCTATACAGTTTG
GTAGTCTCGGCATACTCAACCTCTAAATTATGGGCTGGTCTCTAAGGATATATGGCCATGACTC
ACAAAATTGGTGCCTCTCAGCCTTGGGCGGAACTGCCATTTCATGTCTCACAAAAGGAGGGGGC
TTTCTTCCATATGGCAGTTGAAACTCATGTTGGAAATGGGGAGAATACTTTGTTTTGGAGGGAC
AGGTGGCTGGAAGGGGGAGTCCATACAGGAACTTGATCCCAATCTTTCAAAACCATTCTGGAAG
AATCAGTAAGAAGAGAACAGTTGCTCAAGGCCTTTTGGATAGGAAGTGGGTGTCTGATATGAGG
AGAGCCCTCACAGTCCCGGTGATCCTAGAGTACTTTCTTCTATGAGACATCCTATATGATTTTG
TTCTTCAACCCAGGATTGCTAATAAACATCGTTGGAGGCTTGATGGATCTGGATCATACTCAAG
CCAGTCAGTGTATAATGCCATTTTTCAGTGATCAATCAGGTTTGCCCCATGGAAAAGGACCTAG
AAAAGCTGGGCTCCGCCCCAATTCAGATTCTTCATGTGGTTGGTGATCAAGAATAGACGTGCGC
AGGAGACGCGCATTGATGGAGTCAACAGCGTGTAGATGCAACGACGAGGATGACAACAGACAGC
GATGTTACTGCCCGAGGAGGCGACGCAGCGACGGCCCTCTTGCTTGGCAAAGCATCGCGCGATG
GACGACAAACGTCTCAGGAGGGTGGTTCGCTCGCGATCGGTTGATCAGGCCAACAGCGTGAGAG
GCAGAGACGACAATGGTGATGTCGATGGTGGAGCCTCCCTATCGGTGGTGGCGACGACGAGCCG
ACATAGATGGACGTGCATACGAAGAGGCACGACATAGGCAGGCGTTTCGGTTATGTCGCAGGCC
ACGCCAGTTGCACCGTCGAAGAAGATGAAGAAGTCGGTGTTGTTGAAGCCGATGTCGAGGATGC
GTGAGTCGACTGGCGATGGGCGATGGAGACGCAAACCCAATCACTGACCGGGAAAACAAAAAAG
ACGCAGCAGCAATAGATCTGGTACATCATCGAGGTACCCTAGTGGAGGGATGACCACCAACGCG
GGGAGAAGACGAAGGGCAGCGCGGCGCCAAGGCCGTCGCGAACGAATCGTAGTGTGGAACCAGG
GTGGAGCGAGACCCGACTCGTCCTCCCCACGACGTGTCAGTCCCGAGGACTTCCCAACCATGGT
CTGGTCGACAGCTGAGGTCGCATCCGCCTCCATGGCAGCGTGTGATGTTGCCGACGATGGGGAT
ACAGCCCATCACAGTCGCCACCACGACGATGTGCAATGGGCCAGATCCGGTTGGGGTAGTCGAT
GGGAAGGTGGACAGAGGCCGCCGACGGGGCCTTTATGGTGAGTTCCAATCTGGCGTTGTGCTTG
ACGACGCGACGACGAACGCAGCGGATCAGATGGATCCACGGCACATCCTACAAGGGTGCTGCCC
CTGGTGGAGATCGATCTCCCCGGGGCCAACGCGGCAGCGGCTGCGGAAGGGAGGCGTGACCTAA
ACTCATGATATCATGTAGGAAGGAAGGATTACGTATAATGTGTTGGATGTATTGCATTGAGCCT
CTAGGGAGAATATATAGGAGTACATAACTTAGAGGGCAAGAAGCCTATCCTAGAGATAAGGAAG
GTTATCCTAGATATAAGGAAGGTTATTCCGGGATTACAATCAATCTTAAACCAACCATATCAAG
AGTTGACTAATATACTCTAGCATGCCTAATATACTCTAACAGTTTTTATGTGAGCTGGGTCTTT
GATGGGGCAGGGGGTTATCCCCTCTGTGTACTTCCTCTCTTTTCTTATTAATACAACACACAAT
TCTCTTGCGGGTTCGAGAGAGAGAGACAGACCCTGCTAACTTATAATTATTATTCATTGCTTTC
TCACATATGTTATGACTGGTATAGATATCTTAAGATGATGGACAAAAATGGTGCTGTATAGGGT
CAGACCCTAGAGTCAAAATGATTTAGAATTAGCAGGACCAAAACCGAGTATATGAGATATGACT
TTGGTACTACAATTAGTGAGGATGGAGATGTAAGTTTGGGAGGTCAGATAGTACCAAAGAAGGA
CACCCTCCGTTATTTGGGATCGATGCTACAGAGAGATATTGATGAAGATGTTAGCCATAGAATC
AAAGCAGGGTGGATGAAATGACATCAAGCATCGGGAGTCCTATGCGACAAGAGAGTGCCACAGA
AGTTGAAAGGCAAGTTCTACAGGACAGCGATTAGGCCTGCTATGTTATATGGGGCTGAGTGTTG
GCCTACTAAGAGGCGACATATCCAACAACTAAGTGTTGCAGAGATGCGTATGTTGCGTTGGATA
TGTGGGTACATAAGATTGGACCGAGTGAAAAACGATGACATACGCGATCAGTAGCGCCAATTGA
AGAAAAGCTTATTCAACACCGGTTCAGATGGTTTGGCCATGTCCACCGGAGACCCCTAGAGGCA
CCGGTGCATAGAGGCATCATAAGACGGGACAATAATGTGAAGAGAGGTAGAGGTCGACCAAACT
TGACATGGGAGGAGGCAATCAAAAGGGACTTGAAGGAATGGAATATCCCAATGGAGCTGTGTTT
GGATACAAGTGCTTGAAAAGAAGCTATCCATGTGCCTGAACCGTGATTAGGCCTTTTCCCTTTA
ATGCTCTCAAAAGCTTTTCCCCTCCCCTTTCTCTCTCTTTCTCCTTTTGGTGACATCTTGTTGG
GTTTCAACTCTAGCCTACCCTAACTTGCTTGGGACTAAAAGGCTATGTTGACGTTGATGTTGAC
AGGGTCAAGTTGTGTGATACTAGGAAAGCAATACAATCAATAGTAGAAACAAGTCGTCAGGTCT
TGCAGTTATATTACGTGAAAGGTGGCAAGTGGCATTCTATGATAATGACATGAACATCAGAAAA
ATATGAATATGCAGAAACGGCTGAAAGCTTTCCTGTTATCATTATTGCTTGTGAACTCATTTAC
TGAACTCAAGCACAACTGTAAGGTGCATAGATGTGCAAAATGCAAGACATATTTCTACATTACA
CATATCATAATAGCATAGCATAACATACTGGAAGAACAGAAATTTATCTAGTGAGGAAAAGAAG
TGTACTTTGCAGTTCTACGTTGGTTTGTTATTGTCGCCATAGCACCAGCACCCTCAGCCTCAGC
TGCTTCTTCTGCAACTTGTTGATCTAAGATCTCTTGCATTTCAACAACCCTGATGTATAGTCCA
AAAACAAAATTGATGCAATAATGTAAATTTGTGAATACCATGATATATACCTAATAGAAAATAA
AATAAATTTTATTTGGAAAATATATTCATTGACAATTTTATATTAAAGCAAAAATTGAAGAATG
AGATGTACCTCAAAGCTCGAACCAATGTCTGAGGA
						
					

			
		

Sequences
Splice junction sequence	AAATAAATTTTATTTGGAAAATATATTCATTGACAATTTTATATTAAAGCAAAAATTGAAGAAT GAGATGTACCTCAAAGCTCGAACCAATGTCTGAGGActaggaggaaagcatggtgcaacataat catatatatcgccaagctcatctccaatctgtgttgcaatagaagcaaagtagcaagctataag ccaaaaag
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTAGGAGGAAAGCATGGTGCAACATAATCATATATATCGCCAAGCTCATCTCCAATCTGTGTTG CAATAGAAGCAAAGTAGCAAGCTATAAGCCAAAAAGATTGATAAGGTAAACCAAGGTAAGTACA TTTTCTAAAAAAACATCAGGTACTTCTTTTTACACCCCGAATTACAGAGCCAGTAGGATGGTGA GTCCCCCCCCCAAAAAAAAATCACATGTGCGCATTAGTCACAAAAGAAAGGTGGCAACCACTTC TAAGCTCGCTTGTCACATGTTATGCCTATATATATTTAGATTTGTTATATGGAAATAGTATGCA TAAATTGTCTTGAGATGCACCTAATATCACAATTAATTTGGTTTTCCACATATATAATGAGCAA AATTGTTTTGGGGCCCATGTCTGTTCAAAACAGTACTCTTTTCTGTGACGAGGAATATTTATAG AGAAGACCAACAACAACATTTCCCCTCATGCATGACAAATAGGTTTTAATTAGCTGATAGTATT ATATGGTCCAGTCTGAACTGTGAATTTTTGTGTAACAGGTTAGTAACACTAATTAGCAAACATG TGTTGAGCATGACAGCTTCACCGTCATGAATCATGTAACTCATAAGTCTAGAACTCACAGAAGT GCATTCAATCAATCAATAACCAAAACTAAGAAATAGAGTTCTTACAGCTTTGGCTTCCTCCAAA GCTTCCATCAAGTCCTCCACAAAAACAAGCTGCATGATGAAAATATTAGCTACTGCTGTTCATG AATTGCAATACTAGATCCTAAAATCCAGGATTGACTCAAGTAATACCTCAGTAAGCAACTTGTT GAAGCGGGCCTCAACAGCCATCCTGATAGACTCATAGCATTTGTCCTTGTAGCCCTTTCCCTGA ACCTTCGATTTTTCTTGAGTGCCCTTTCTTGGGGTAACTGTTGCCCCTGCACCTTTTCTGCTAG CAATGGGAAGGCCAGCAAAAAATCACTGGTAACCTGATAAGAGGTTTCCTTTGGGCTGGAAAGG AAATTGCTAATAGGGGGGGGATGTTTAATGGCCTGGTATAAAGTTACGAGACCTATACAGTTTG GTAGTCTCGGCATACTCAACCTCTAAATTATGGGCTGGTCTCTAAGGATATATGGCCATGACTC ACAAAATTGGTGCCTCTCAGCCTTGGGCGGAACTGCCATTTCATGTCTCACAAAAGGAGGGGGC TTTCTTCCATATGGCAGTTGAAACTCATGTTGGAAATGGGGAGAATACTTTGTTTTGGAGGGAC AGGTGGCTGGAAGGGGGAGTCCATACAGGAACTTGATCCCAATCTTTCAAAACCATTCTGGAAG AATCAGTAAGAAGAGAACAGTTGCTCAAGGCCTTTTGGATAGGAAGTGGGTGTCTGATATGAGG AGAGCCCTCACAGTCCCGGTGATCCTAGAGTACTTTCTTCTATGAGACATCCTATATGATTTTG TTCTTCAACCCAGGATTGCTAATAAACATCGTTGGAGGCTTGATGGATCTGGATCATACTCAAG CCAGTCAGTGTATAATGCCATTTTTCAGTGATCAATCAGGTTTGCCCCATGGAAAAGGACCTAG AAAAGCTGGGCTCCGCCCCAATTCAGATTCTTCATGTGGTTGGTGATCAAGAATAGACGTGCGC AGGAGACGCGCATTGATGGAGTCAACAGCGTGTAGATGCAACGACGAGGATGACAACAGACAGC GATGTTACTGCCCGAGGAGGCGACGCAGCGACGGCCCTCTTGCTTGGCAAAGCATCGCGCGATG GACGACAAACGTCTCAGGAGGGTGGTTCGCTCGCGATCGGTTGATCAGGCCAACAGCGTGAGAG GCAGAGACGACAATGGTGATGTCGATGGTGGAGCCTCCCTATCGGTGGTGGCGACGACGAGCCG ACATAGATGGACGTGCATACGAAGAGGCACGACATAGGCAGGCGTTTCGGTTATGTCGCAGGCC ACGCCAGTTGCACCGTCGAAGAAGATGAAGAAGTCGGTGTTGTTGAAGCCGATGTCGAGGATGC GTGAGTCGACTGGCGATGGGCGATGGAGACGCAAACCCAATCACTGACCGGGAAAACAAAAAAG ACGCAGCAGCAATAGATCTGGTACATCATCGAGGTACCCTAGTGGAGGGATGACCACCAACGCG GGGAGAAGACGAAGGGCAGCGCGGCGCCAAGGCCGTCGCGAACGAATCGTAGTGTGGAACCAGG GTGGAGCGAGACCCGACTCGTCCTCCCCACGACGTGTCAGTCCCGAGGACTTCCCAACCATGGT CTGGTCGACAGCTGAGGTCGCATCCGCCTCCATGGCAGCGTGTGATGTTGCCGACGATGGGGAT ACAGCCCATCACAGTCGCCACCACGACGATGTGCAATGGGCCAGATCCGGTTGGGGTAGTCGAT GGGAAGGTGGACAGAGGCCGCCGACGGGGCCTTTATGGTGAGTTCCAATCTGGCGTTGTGCTTG ACGACGCGACGACGAACGCAGCGGATCAGATGGATCCACGGCACATCCTACAAGGGTGCTGCCC CTGGTGGAGATCGATCTCCCCGGGGCCAACGCGGCAGCGGCTGCGGAAGGGAGGCGTGACCTAA ACTCATGATATCATGTAGGAAGGAAGGATTACGTATAATGTGTTGGATGTATTGCATTGAGCCT CTAGGGAGAATATATAGGAGTACATAACTTAGAGGGCAAGAAGCCTATCCTAGAGATAAGGAAG GTTATCCTAGATATAAGGAAGGTTATTCCGGGATTACAATCAATCTTAAACCAACCATATCAAG AGTTGACTAATATACTCTAGCATGCCTAATATACTCTAACAGTTTTTATGTGAGCTGGGTCTTT GATGGGGCAGGGGGTTATCCCCTCTGTGTACTTCCTCTCTTTTCTTATTAATACAACACACAAT TCTCTTGCGGGTTCGAGAGAGAGAGACAGACCCTGCTAACTTATAATTATTATTCATTGCTTTC TCACATATGTTATGACTGGTATAGATATCTTAAGATGATGGACAAAAATGGTGCTGTATAGGGT CAGACCCTAGAGTCAAAATGATTTAGAATTAGCAGGACCAAAACCGAGTATATGAGATATGACT TTGGTACTACAATTAGTGAGGATGGAGATGTAAGTTTGGGAGGTCAGATAGTACCAAAGAAGGA CACCCTCCGTTATTTGGGATCGATGCTACAGAGAGATATTGATGAAGATGTTAGCCATAGAATC AAAGCAGGGTGGATGAAATGACATCAAGCATCGGGAGTCCTATGCGACAAGAGAGTGCCACAGA AGTTGAAAGGCAAGTTCTACAGGACAGCGATTAGGCCTGCTATGTTATATGGGGCTGAGTGTTG GCCTACTAAGAGGCGACATATCCAACAACTAAGTGTTGCAGAGATGCGTATGTTGCGTTGGATA TGTGGGTACATAAGATTGGACCGAGTGAAAAACGATGACATACGCGATCAGTAGCGCCAATTGA AGAAAAGCTTATTCAACACCGGTTCAGATGGTTTGGCCATGTCCACCGGAGACCCCTAGAGGCA CCGGTGCATAGAGGCATCATAAGACGGGACAATAATGTGAAGAGAGGTAGAGGTCGACCAAACT TGACATGGGAGGAGGCAATCAAAAGGGACTTGAAGGAATGGAATATCCCAATGGAGCTGTGTTT GGATACAAGTGCTTGAAAAGAAGCTATCCATGTGCCTGAACCGTGATTAGGCCTTTTCCCTTTA ATGCTCTCAAAAGCTTTTCCCCTCCCCTTTCTCTCTCTTTCTCCTTTTGGTGACATCTTGTTGG GTTTCAACTCTAGCCTACCCTAACTTGCTTGGGACTAAAAGGCTATGTTGACGTTGATGTTGAC AGGGTCAAGTTGTGTGATACTAGGAAAGCAATACAATCAATAGTAGAAACAAGTCGTCAGGTCT TGCAGTTATATTACGTGAAAGGTGGCAAGTGGCATTCTATGATAATGACATGAACATCAGAAAA ATATGAATATGCAGAAACGGCTGAAAGCTTTCCTGTTATCATTATTGCTTGTGAACTCATTTAC TGAACTCAAGCACAACTGTAAGGTGCATAGATGTGCAAAATGCAAGACATATTTCTACATTACA CATATCATAATAGCATAGCATAACATACTGGAAGAACAGAAATTTATCTAGTGAGGAAAAGAAG TGTACTTTGCAGTTCTACGTTGGTTTGTTATTGTCGCCATAGCACCAGCACCCTCAGCCTCAGC TGCTTCTTCTGCAACTTGTTGATCTAAGATCTCTTGCATTTCAACAACCCTGATGTATAGTCCA AAAACAAAATTGATGCAATAATGTAAATTTGTGAATACCATGATATATACCTAATAGAAAATAA AATAAATTTTATTTGGAAAATATATTCATTGACAATTTTATATTAAAGCAAAAATTGAAGAATG AGATGTACCTCAAAGCTCGAACCAATGTCTGAGGA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.039340624

Conservation Information
Conserved circRNAs	NA
PMCS	0.039340624

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							213519600-213515274(-)
213515322-213519763(-)
						
						Potential amino acid sequence
						
							MQEILDQQVAEEAAEAEGAGAMATITNQRRTAKKGAGATVTPRKGTQEKSKVQGKGYKDKCYES
IRMAVEARFNKLLTELVFVEDLMEALEEAKAIGDELGDIYDYVAPCFPPSPQTLVRALRVVEMQ
EILDQQVAEEAAEAEGAGAMATITNQRRTAKKGAGATVTPRKGTQEKSKVQGKGYKDKCYESIR
MAVEARFNKLLTELVFVEDLMEALEEAKAIGDELGDIYDYVAPCFPPSPQTLVRALRVVEMQEI
LDQQVAEEAAEAEGAGAMATITNQRRTAKKGAGATVTPRKGTQEKSKVQGKGYKDKCYESIRMA
VEARFNKLLTELVFVEDLMEALEEAKAIGDELGDIYDYVAPCFPPSPQTLVRALRVVEMQEILD
QQVAEEAAEAEGAGAMATITNQRRTAKKGAGATVTPRKGTQEKSKVQGKGYKDKCYESIRMAVE
ARFNKLLTELVFVEDLMEALEEAKAIGDELGDIYDYVAPCFPP(-)
MSLAIYMIMLHHAFLLVLRHWFEL*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	213519600-213515274(-) 213515322-213519763(-)
Potential amino acid sequence	MQEILDQQVAEEAAEAEGAGAMATITNQRRTAKKGAGATVTPRKGTQEKSKVQGKGYKDKCYES IRMAVEARFNKLLTELVFVEDLMEALEEAKAIGDELGDIYDYVAPCFPPSPQTLVRALRVVEMQ EILDQQVAEEAAEAEGAGAMATITNQRRTAKKGAGATVTPRKGTQEKSKVQGKGYKDKCYESIR MAVEARFNKLLTELVFVEDLMEALEEAKAIGDELGDIYDYVAPCFPPSPQTLVRALRVVEMQEI LDQQVAEEAAEAEGAGAMATITNQRRTAKKGAGATVTPRKGTQEKSKVQGKGYKDKCYESIRMA VEARFNKLLTELVFVEDLMEALEEAKAIGDELGDIYDYVAPCFPPSPQTLVRALRVVEMQEILD QQVAEEAAEAEGAGAMATITNQRRTAKKGAGATVTPRKGTQEKSKVQGKGYKDKCYESIRMAVE ARFNKLLTELVFVEDLMEALEEAKAIGDELGDIYDYVAPCFPP(-) MSLAIYMIMLHHAFLLVLRHWFEL*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020;Zhang et al., 2019

circRNA

Detail information of Zm00001d018060_circ_g.4

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