Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d018060_circ_g.3 |
ID in PlantcircBase | zma_circ_002145 |
Alias | circ999 |
Organism | Zea mays |
Position | chr5: 213515271-213519786 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d018060 |
Parent gene annotation |
Exocyst complex component SEC6 |
Parent gene strand | - |
Alternative splicing | Zm00001d018060_circ_g.1 Zm00001d018060_circ_g.2 Zm00001d018060_circ_g.4 |
Support reads | 35 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d018060_T012:5 Zm00001d018060_T010:5 Zm00001d018060_T005:4 Zm00001d018060_T013:5 Zm00001d018060_T004:3 Zm00001d018060_T011:5 Zm00001d018060_T002:5 Zm00001d018060_T009:5 Zm00001d018060_T015:5 Zm00001d018060_T006:5 Zm00001d018060_T014:5 Zm00001d018060_T003:5 Zm00001d018060_T008:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.047898422 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |