Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os04g0337500_circ_ag.4 |
ID in PlantcircBase | osa_circ_023437 |
Alias | Os_ciR9278 |
Organism | Oryza sativa |
Position | chr4: 15892508-15907942 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ag-circRNA |
Identification method | find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | Os04g0337500_circ_ag.1 Os04g0337500_circ_ag.2 Os04g0337500_circ_ag.3 Os04g0337500_circ_ag.5 Os04g0337800_circ_ag.1 Os04g0338000_circ_ag.1 Os04g0338000_circ_ag.2 |
Support reads | 2 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | osi_circ_014244 |
PMCS | 0.846231071 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | osa-miR1435 osa-miR815c |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |