Plant Circular RNA Database

Detail information of Zm00001d002390_circ_g.3

			
						 General Information
					
						CircRNA Name
						Zm00001d002390_circ_g.3
					
						ID in PlantcircBase
						zma_circ_007066
					
						Alias
						Zm02circ00016, zma_circ_0000653
					
						Organism
						
							Zea mays						
					
						Position
						
							chr2: 11676144-11680634  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRI2, find_circ
					
						Parent gene
						
							Zm00001d002390						
					
						Parent gene annotation
						
							DNA ligase 4
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d002390_circ_g.1 Zm00001d002390_circ_g.2 Zm00001d002390_circ_g.4 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d002390_T016:10
Zm00001d002390_T024:10
Zm00001d002390_T015:10
Zm00001d002390_T020:10
Zm00001d002390_T001:10
Zm00001d002390_T014:10
Zm00001d002390_T003:9
Zm00001d002390_T005:9
Zm00001d002390_T006:10
Zm00001d002390_T013:10
Zm00001d002390_T023:10
Zm00001d002390_T025:9
Zm00001d002390_T012:10
Zm00001d002390_T021:10
Zm00001d002390_T008:10
Zm00001d002390_T017:10
Zm00001d002390_T018:10
Zm00001d002390_T010:10
Zm00001d002390_T004:8
Zm00001d002390_T019:9
Zm00001d002390_T011:10
Zm00001d002390_T022:10

General Information
CircRNA Name	Zm00001d002390_circ_g.3
ID in PlantcircBase	zma_circ_007066
Alias	Zm02circ00016, zma_circ_0000653
Organism	Zea mays
Position	chr2: 11676144-11680634 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2, find_circ
Parent gene	Zm00001d002390
Parent gene annotation	DNA ligase 4
Parent gene strand	-
Alternative splicing	Zm00001d002390_circ_g.1 Zm00001d002390_circ_g.2 Zm00001d002390_circ_g.4
Support reads	NA
Tissues	leaf, endosperm, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d002390_T016:10 Zm00001d002390_T024:10 Zm00001d002390_T015:10 Zm00001d002390_T020:10 Zm00001d002390_T001:10 Zm00001d002390_T014:10 Zm00001d002390_T003:9 Zm00001d002390_T005:9 Zm00001d002390_T006:10 Zm00001d002390_T013:10 Zm00001d002390_T023:10 Zm00001d002390_T025:9 Zm00001d002390_T012:10 Zm00001d002390_T021:10 Zm00001d002390_T008:10 Zm00001d002390_T017:10 Zm00001d002390_T018:10 Zm00001d002390_T010:10 Zm00001d002390_T004:8 Zm00001d002390_T019:9 Zm00001d002390_T011:10 Zm00001d002390_T022:10

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTTAACTGTTTCACAACCTTCTGCAGAATTTGATGCCGCTCCGTCAAACTTTGGTGGATAACAC
TGGTGTCTCCAGCATAAAGGATGTCAAAAACAACATagaaaatcaggttggcaaatatcaaggt
ttctcccttgagacctgatacatcagttttcatgaaatgtgaagggatgattgagacacacttc
tctacttt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 966
Transcript exons: 11676144-11676344,11676487-11676574,11676717-11676765,11
676854-11676946,11677091-11677174,11679283-11679341,1167
9563-11679597,11679684-11679808,11679886-11679961,116804
79-11680634
AGAAAATCAGGTTGGCAAATATCAAGGTTTCTCCCTTGAGACCTGATACATCAGTTTTCATGAA
ATGTGAAGGGATGATTGAGACACACTTCTCTACTTTTTTGTTTGTTCTTGAATGTTTTGTGTCA
TCATTCTTCAGGCTATTATCATCTGCCACCCTTTGTATTGTACCATTATTTGAATGCACAATGT
CCACAAATGCCTGCACATCAAGGCACTCATGCCATGGCTTGTCATATCTCACTCGCTGAATACG
GGGGAACCTCAAACAGTATGGAGCAGCAAATACCTCAGACTTGATTGTACGAATGTCACTTGTT
ACAGATATTATGACTGACTTATCAGGACTTTCAATCCAAACATCTGGTCTCTCCTTTGAGTTAT
TTGTAACTTCATAGAATTTTGGTGGTTTTTTGGGGTACTCATTTTTCCTGAAATAAGGGTTCAG
TTTGGTGACAAGAGCATCACGCTCTTCATCAGAGAGGCCAGTACCAACTCGGCAAAACGAAAGG
AACCTTTTGGGATAACTATTATCATCTGAAGGGACTGCAAGGCCAACTAAAAACTGTGCGACCT
CTCCACCTTGACGTCCTGATCCATAGTATCCCCCTATAATAATAACATCCAGATCGGCACCCGC
GTGTATATAATCAGGCTTTAGTTTAAGCCACTTTCCATTTCGATCACCAGGTTCCCATTTGGAA
TCAAGGTCCTTCAGTACAATGCCCTCATCTCTGTTCTCGATAGTCTCTTTGAAGAATTTATCAA
CGTCTTCAGCATTATGTGCAATAATCGACCAGCATGGTTCATCTGAAGGGCGAGGGACATTTAA
ACCACGTCTTGGGATCAAAATCTCAAGATGACCCTTTAACTGTTTCACAACCTTCTGCAGAATT
TGATGCCGCTCCGTCAAACTTTGGTGGATAACACTGGTGTCTCCAGCATAAAGGATGTCAAAAA
CAACAT
						
					

						Genomic sequence
						
							AGAAAATCAGGTTGGCAAATATCAAGGTTTCTCCCTTGAGACCTGATACATCAGTTTTCATGAA
ATGTGAAGGGATGATTGAGACACACTTCTCTACTTTTTTGTTTGTTCTTGAATGTTTTGTGTCA
TCATTCTTCAGGCTATTATCATCTGCCACCCTTTGTATTGTACCATTATTTGAATGCACAATGT
CCACAAATGCTGCAATGATCAGCGTGTTATAGAGAAATCATCTTCGAGATATAACCTAGATTAG
GGCATCACGAGGGATGTAGCTTATTGTAAGCTACTAAAAGAACAAAGAATACAGACACAAAATA
TTAAGTATAAGAAAAACAATTACCCTGCACATCAAGGCACTCATGCCATGGCTTGTCATATCTC
ACTCGCTGAATACGGGGGAACCTCAAACAGTATGGAGCAGCAAATACCTGCATAAGGTTGAAAA
CATTAAAAGTAAGTTAGAAGAGAAAATACACCAGCTGACTGCACAAGAGAAATCAGTCCAAGAA
TTAATGCTTTTAAAGACAGAACTGCAGAACATATAAGTATTTGATTCTTTAAATCAAATACCTC
AGACTTGATTGTACGAATGTCACTTGTTACAGATATTATGACTGACCTGAAAATGCAATTAGTG
ATTTAGCATATCATGTGCTTCCTATATCTAAGAAAATGGCTCTCAATCAAAGAATTAAAAAAAA
ACTTACTTATCAGGACTTTCAATCCAAACATCTGGTCTCTCCTTTGAGTTATTTGTAACTTCAT
AGAATTTTGGTGGTTTTTTGGGGTACTCATTTTTCCTGATTCAAAAAATAGCACAATATGACAG
AATGAGAAGGAACTTTAATTCCTTAGTAATAAATAGGTTTTGAAGCTTCAAGGAAACGTACTTA
CACAAAATACTGATTCAGTAAATATGAAACATAATAATCAAAGTTGAATACCTGAAATAAGGGT
TCAGTTTGGTGACAAGAGCATCACGCTCTTCATCAGAGAGGCCAGTACCAACTCGGCAAAACGA
AAGGAACCTTGGAAAGTGTACGCAAGGACAGAAAACAAGAAACATCAGAGTTAGATGGTTAAAC
CATGATGCTGTATTGCCTTAGTAAGAAAATTTGGGCTCTGTTGTGGGAAAAAGGAAACACCATG
AAATGACAAAACAAAGTTCTTACCATATAAAACCTCATTAGACATGTTTGATAACAAGAAACAT
CACATCAATAAATAAAATGGGCAATTGTTTTCTATGTTTTGCCAAGCACAGGTATGAAATGCAT
ATACTAGTATTAGAATATATAATACTTAAAGACACAAAAAAGGTATCCATGCAAACCTATCAGC
AACTCACCAAAGTACAAAACCTTCCTTTTTCTCGAACACGCAGGAGAGTTGCGTATCATTTCAT
TAGAAGAAGAAAAGAAAAAACAGTATATACAAGGACTTAACACACCACTCACACACGCACACAC
AAACAACAAGAGGTAAAACCGCCTCCTAGCCGGGGTTGAACACAAAAGCTAGGTCTGAAAGACG
GGTCAAGCCTTTGGCCCCCGCAAAACACCACATATCGAACTCATCACCGACTTAGGTAAGCAAT
ATAGCTATAGAAGGTTGAGCACCATTGAAAACACAATCATTTCGATGTCTCCAGATACTCCAAG
CCCCAGGACCACCAAGGAGTTAAAGCCATCTCTGAGGTCCTTAGGAACAACCTCAGCCGATCTA
CTCCACCAAGCTTCAAAACTTATATCTTCCATCCCCGGGGAAAGGGCGGCCAGGCCGACACGTT
GGAGAAGGAGAAACCAAAATTGCCTCGCGAGAAGACAGGAAACAAGCAAGTGATGAATAGACTC
CCCTTCCTACCTGGTCACATAAGGGGCAAGTACTAGGATGGGGAAGACCCTTCTTAGTGAGCCG
GTCAGTCGTCCAACATTTGTTATGTAAGACCAACCAGAGGAAAAACTGACACTTAGGCGGCGCC
CAGGTGCTCCACACTCTTTCAAAGCCCGCCAGGGAGATAGAGCCGCAGAACATTATCTCATAAG
CAGATTTGGCCGAATAGATACCATTGGAAGAGAACCTCCAATAATGTTTATCTGGAACTCCCGG
TTGAAGATCAACATCAGCCACAGCATCTGCCAGAATAATGAAGTCAGCAATTACCTCCCACGTT
ACCACTCCCCTTAAATCCCCAATCCATGAAGAACTACACAGAGCATCAGCCAATGTCCTTCTCT
TCACCAGCCTTTTAGGAACCAAACTAAAAACATGAGGGGTCAAGTCTGCAATCCTCTGACCCAA
GAGCCATCTGTCATTGCCAAAAAAGAGTGGACTGCCCATCACCCACCATGGAGGCCATTGCCAA
AGAGCACAAGTTATCCAAAAACCGATTTGATTGGAAAGGCAAGTCAGTCCAAGGTTTGGAAGAA
TCGATTTTTTGGAGCCAAATCTATCTAGCACGTAAGGCCCTATTTACACATTGAATGTCAGAGA
TACCAAGGCCCCCCAACTCTTTGGGGCGTGTTACCTTGCCCCAGGCCACCATACAATGGCCACC
ATTAGCCTCTTTACGCCCTCTCCACAAGAACCCGCGACGGATTTTATCAATGACTTTAATAACC
CACTTAGGCAGATCCAGTACCATCATATGATAGATAACAGTAGCAGTGAGCACAAATTGCACCT
GGGTAGCTCTGCCAGCACGGGTCATCGGGTCAGCTTTCCAAGCCGATAAGAGGTCAGCCACCTT
GTCAATGAGAGGCTGAAGTTGAGCCTTAGACAACTTCAGGGAGAGAGGGAGGCCCAAGTATTTA
ATTGGAAAAGTTTCAAATCTGCAGGGAAGGAGCTGCTGGACCAAATTCAAATCATCATGTGTGC
AACGAATGGGCGCGATACTGCTCTTCGCTATATTAGGCAACCACATCTAAGAACCAAGCAATAA
CTCAGTTGGTAGAGCCTCAAGCTGAGACTTGAGAGGACGGCCAACAAGGCTATAACCAAGGATC
TTTAATGCAAAGCCAAGGAGCATCTTCTTCCCATGGTCGAGTTTTAAGGATGATCACAATTTGC
TTTTCATTATGATCTTCACCTACAATTGCTTCTATGAAACATACAGTGGTGGAGAAACTCTGCT
TACCTTTTGGGATAACTATTATCATCTGAAGGGACTGCAAGGCCAACTAAAAACTGTGCGACCT
ATAAATCAGTTAAGAACAATGATCAGCAGTTTTTACTTTTTAATAGCTTCAAAAGAATAAAGCT
AAGAGTGCGTTTTTGACATTAAACAAAATGTATTTCTATGTCCTTTGATGATTATATAGGAACA
GTAGAAGACAATGCACTAGCAAGACATTATAACATTCACACCCAGATAACCCTAATGCTGAAAT
TAAAACAGTAAGCCAAGTCTAGTGCACCTCTCCACCTTGACGTCCTGATCCATAGTATCCCCCT
GACAACAAAGGGGCCAACATACCCTCAATCAATAGTTTCAAAAGGTCAATCATTTGCTCTTCAC
ACATGAAGAAAGATGCTTACCTATAATAATAACATCCAGATCGGCACCCGCGTGTATATAATCA
GGCTTTAGTTTAAGCCACTTTCCATTTCGATCACCAGGTTCCCATTTGGAATCAAGGTCCTTCA
GTACAATGCCCTCATCTCTAACCACAATTAATGAATTGAAAATCATAAAATTGACACTAAATGG
GTTCGATTAACTAAGAAGGTACAAAGAAACCTGTTCTCGATAGTCTCTTTGAAGAATTTATCAA
CGTCTTCAGCATTATGTGCAATAATCGACCAGCATGGTTCATCTGCATATTGTAAATAAGTTTA
CACCCCGGTTGGGTGTAGATATTGAAGTCTGGAATTGGGAATTGGAATCAGGATTCTTGAATTC
TGCTGTTTGTTAGTCTAATGAATTCAGATTTGGGTTTAAACCTCAATTTCTCAGTATTGGACTA
TAACTAGAAGTTGTCTCTCACAATTCAGAGCCTAGACCCTCTGTGTTGGCTGAAATTGCAATTC
CAGTTACATCTAAACAACAGATTTTGCAATCCATTTCTAATACTAGACAGATTTGGAACATCTT
CAATATCTACATCCAAGCAGACCCTTAGTATTGCATAGTAATAGGTTTACAACAGATATATAAT
AGAACATAACAGGTGATCTTCTGAACAAAATTTAAAATGCAGCAAAAGAAATCCTATCAGCATT
CTAGATCAAGCTACCGGAATCCATTGTACAATGTCATCTATTTGGACGTGGGTGAACCCAAATG
CATCCATGAGAAAATAAAAATACAATTGTAAAATAGTCATCAGCTACCTGAAGGGCGAGGGACA
TTTAAACCACGTCTTGGGATCAAAATCTCAAGATGACCCTTTAACTGTTTCACAACCTTCTGCA
GAATTTGATGCCGCTCCGTCAAACTTTGGTGGATAACACTGGTGTCTCCAGCATAAAGGATGTC
AAAAACAACAT
						
					

			
		

Sequences
Splice junction sequence	TTTAACTGTTTCACAACCTTCTGCAGAATTTGATGCCGCTCCGTCAAACTTTGGTGGATAACAC TGGTGTCTCCAGCATAAAGGATGTCAAAAACAACATagaaaatcaggttggcaaatatcaaggt ttctcccttgagacctgatacatcagttttcatgaaatgtgaagggatgattgagacacacttc tctacttt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 966 Transcript exons: 11676144-11676344,11676487-11676574,11676717-11676765,11 676854-11676946,11677091-11677174,11679283-11679341,1167 9563-11679597,11679684-11679808,11679886-11679961,116804 79-11680634 AGAAAATCAGGTTGGCAAATATCAAGGTTTCTCCCTTGAGACCTGATACATCAGTTTTCATGAA ATGTGAAGGGATGATTGAGACACACTTCTCTACTTTTTTGTTTGTTCTTGAATGTTTTGTGTCA TCATTCTTCAGGCTATTATCATCTGCCACCCTTTGTATTGTACCATTATTTGAATGCACAATGT CCACAAATGCCTGCACATCAAGGCACTCATGCCATGGCTTGTCATATCTCACTCGCTGAATACG GGGGAACCTCAAACAGTATGGAGCAGCAAATACCTCAGACTTGATTGTACGAATGTCACTTGTT ACAGATATTATGACTGACTTATCAGGACTTTCAATCCAAACATCTGGTCTCTCCTTTGAGTTAT TTGTAACTTCATAGAATTTTGGTGGTTTTTTGGGGTACTCATTTTTCCTGAAATAAGGGTTCAG TTTGGTGACAAGAGCATCACGCTCTTCATCAGAGAGGCCAGTACCAACTCGGCAAAACGAAAGG AACCTTTTGGGATAACTATTATCATCTGAAGGGACTGCAAGGCCAACTAAAAACTGTGCGACCT CTCCACCTTGACGTCCTGATCCATAGTATCCCCCTATAATAATAACATCCAGATCGGCACCCGC GTGTATATAATCAGGCTTTAGTTTAAGCCACTTTCCATTTCGATCACCAGGTTCCCATTTGGAA TCAAGGTCCTTCAGTACAATGCCCTCATCTCTGTTCTCGATAGTCTCTTTGAAGAATTTATCAA CGTCTTCAGCATTATGTGCAATAATCGACCAGCATGGTTCATCTGAAGGGCGAGGGACATTTAA ACCACGTCTTGGGATCAAAATCTCAAGATGACCCTTTAACTGTTTCACAACCTTCTGCAGAATT TGATGCCGCTCCGTCAAACTTTGGTGGATAACACTGGTGTCTCCAGCATAAAGGATGTCAAAAA CAACAT
Genomic sequence	AGAAAATCAGGTTGGCAAATATCAAGGTTTCTCCCTTGAGACCTGATACATCAGTTTTCATGAA ATGTGAAGGGATGATTGAGACACACTTCTCTACTTTTTTGTTTGTTCTTGAATGTTTTGTGTCA TCATTCTTCAGGCTATTATCATCTGCCACCCTTTGTATTGTACCATTATTTGAATGCACAATGT CCACAAATGCTGCAATGATCAGCGTGTTATAGAGAAATCATCTTCGAGATATAACCTAGATTAG GGCATCACGAGGGATGTAGCTTATTGTAAGCTACTAAAAGAACAAAGAATACAGACACAAAATA TTAAGTATAAGAAAAACAATTACCCTGCACATCAAGGCACTCATGCCATGGCTTGTCATATCTC ACTCGCTGAATACGGGGGAACCTCAAACAGTATGGAGCAGCAAATACCTGCATAAGGTTGAAAA CATTAAAAGTAAGTTAGAAGAGAAAATACACCAGCTGACTGCACAAGAGAAATCAGTCCAAGAA TTAATGCTTTTAAAGACAGAACTGCAGAACATATAAGTATTTGATTCTTTAAATCAAATACCTC AGACTTGATTGTACGAATGTCACTTGTTACAGATATTATGACTGACCTGAAAATGCAATTAGTG ATTTAGCATATCATGTGCTTCCTATATCTAAGAAAATGGCTCTCAATCAAAGAATTAAAAAAAA ACTTACTTATCAGGACTTTCAATCCAAACATCTGGTCTCTCCTTTGAGTTATTTGTAACTTCAT AGAATTTTGGTGGTTTTTTGGGGTACTCATTTTTCCTGATTCAAAAAATAGCACAATATGACAG AATGAGAAGGAACTTTAATTCCTTAGTAATAAATAGGTTTTGAAGCTTCAAGGAAACGTACTTA CACAAAATACTGATTCAGTAAATATGAAACATAATAATCAAAGTTGAATACCTGAAATAAGGGT TCAGTTTGGTGACAAGAGCATCACGCTCTTCATCAGAGAGGCCAGTACCAACTCGGCAAAACGA AAGGAACCTTGGAAAGTGTACGCAAGGACAGAAAACAAGAAACATCAGAGTTAGATGGTTAAAC CATGATGCTGTATTGCCTTAGTAAGAAAATTTGGGCTCTGTTGTGGGAAAAAGGAAACACCATG AAATGACAAAACAAAGTTCTTACCATATAAAACCTCATTAGACATGTTTGATAACAAGAAACAT CACATCAATAAATAAAATGGGCAATTGTTTTCTATGTTTTGCCAAGCACAGGTATGAAATGCAT ATACTAGTATTAGAATATATAATACTTAAAGACACAAAAAAGGTATCCATGCAAACCTATCAGC AACTCACCAAAGTACAAAACCTTCCTTTTTCTCGAACACGCAGGAGAGTTGCGTATCATTTCAT TAGAAGAAGAAAAGAAAAAACAGTATATACAAGGACTTAACACACCACTCACACACGCACACAC AAACAACAAGAGGTAAAACCGCCTCCTAGCCGGGGTTGAACACAAAAGCTAGGTCTGAAAGACG GGTCAAGCCTTTGGCCCCCGCAAAACACCACATATCGAACTCATCACCGACTTAGGTAAGCAAT ATAGCTATAGAAGGTTGAGCACCATTGAAAACACAATCATTTCGATGTCTCCAGATACTCCAAG CCCCAGGACCACCAAGGAGTTAAAGCCATCTCTGAGGTCCTTAGGAACAACCTCAGCCGATCTA CTCCACCAAGCTTCAAAACTTATATCTTCCATCCCCGGGGAAAGGGCGGCCAGGCCGACACGTT GGAGAAGGAGAAACCAAAATTGCCTCGCGAGAAGACAGGAAACAAGCAAGTGATGAATAGACTC CCCTTCCTACCTGGTCACATAAGGGGCAAGTACTAGGATGGGGAAGACCCTTCTTAGTGAGCCG GTCAGTCGTCCAACATTTGTTATGTAAGACCAACCAGAGGAAAAACTGACACTTAGGCGGCGCC CAGGTGCTCCACACTCTTTCAAAGCCCGCCAGGGAGATAGAGCCGCAGAACATTATCTCATAAG CAGATTTGGCCGAATAGATACCATTGGAAGAGAACCTCCAATAATGTTTATCTGGAACTCCCGG TTGAAGATCAACATCAGCCACAGCATCTGCCAGAATAATGAAGTCAGCAATTACCTCCCACGTT ACCACTCCCCTTAAATCCCCAATCCATGAAGAACTACACAGAGCATCAGCCAATGTCCTTCTCT TCACCAGCCTTTTAGGAACCAAACTAAAAACATGAGGGGTCAAGTCTGCAATCCTCTGACCCAA GAGCCATCTGTCATTGCCAAAAAAGAGTGGACTGCCCATCACCCACCATGGAGGCCATTGCCAA AGAGCACAAGTTATCCAAAAACCGATTTGATTGGAAAGGCAAGTCAGTCCAAGGTTTGGAAGAA TCGATTTTTTGGAGCCAAATCTATCTAGCACGTAAGGCCCTATTTACACATTGAATGTCAGAGA TACCAAGGCCCCCCAACTCTTTGGGGCGTGTTACCTTGCCCCAGGCCACCATACAATGGCCACC ATTAGCCTCTTTACGCCCTCTCCACAAGAACCCGCGACGGATTTTATCAATGACTTTAATAACC CACTTAGGCAGATCCAGTACCATCATATGATAGATAACAGTAGCAGTGAGCACAAATTGCACCT GGGTAGCTCTGCCAGCACGGGTCATCGGGTCAGCTTTCCAAGCCGATAAGAGGTCAGCCACCTT GTCAATGAGAGGCTGAAGTTGAGCCTTAGACAACTTCAGGGAGAGAGGGAGGCCCAAGTATTTA ATTGGAAAAGTTTCAAATCTGCAGGGAAGGAGCTGCTGGACCAAATTCAAATCATCATGTGTGC AACGAATGGGCGCGATACTGCTCTTCGCTATATTAGGCAACCACATCTAAGAACCAAGCAATAA CTCAGTTGGTAGAGCCTCAAGCTGAGACTTGAGAGGACGGCCAACAAGGCTATAACCAAGGATC TTTAATGCAAAGCCAAGGAGCATCTTCTTCCCATGGTCGAGTTTTAAGGATGATCACAATTTGC TTTTCATTATGATCTTCACCTACAATTGCTTCTATGAAACATACAGTGGTGGAGAAACTCTGCT TACCTTTTGGGATAACTATTATCATCTGAAGGGACTGCAAGGCCAACTAAAAACTGTGCGACCT ATAAATCAGTTAAGAACAATGATCAGCAGTTTTTACTTTTTAATAGCTTCAAAAGAATAAAGCT AAGAGTGCGTTTTTGACATTAAACAAAATGTATTTCTATGTCCTTTGATGATTATATAGGAACA GTAGAAGACAATGCACTAGCAAGACATTATAACATTCACACCCAGATAACCCTAATGCTGAAAT TAAAACAGTAAGCCAAGTCTAGTGCACCTCTCCACCTTGACGTCCTGATCCATAGTATCCCCCT GACAACAAAGGGGCCAACATACCCTCAATCAATAGTTTCAAAAGGTCAATCATTTGCTCTTCAC ACATGAAGAAAGATGCTTACCTATAATAATAACATCCAGATCGGCACCCGCGTGTATATAATCA GGCTTTAGTTTAAGCCACTTTCCATTTCGATCACCAGGTTCCCATTTGGAATCAAGGTCCTTCA GTACAATGCCCTCATCTCTAACCACAATTAATGAATTGAAAATCATAAAATTGACACTAAATGG GTTCGATTAACTAAGAAGGTACAAAGAAACCTGTTCTCGATAGTCTCTTTGAAGAATTTATCAA CGTCTTCAGCATTATGTGCAATAATCGACCAGCATGGTTCATCTGCATATTGTAAATAAGTTTA CACCCCGGTTGGGTGTAGATATTGAAGTCTGGAATTGGGAATTGGAATCAGGATTCTTGAATTC TGCTGTTTGTTAGTCTAATGAATTCAGATTTGGGTTTAAACCTCAATTTCTCAGTATTGGACTA TAACTAGAAGTTGTCTCTCACAATTCAGAGCCTAGACCCTCTGTGTTGGCTGAAATTGCAATTC CAGTTACATCTAAACAACAGATTTTGCAATCCATTTCTAATACTAGACAGATTTGGAACATCTT CAATATCTACATCCAAGCAGACCCTTAGTATTGCATAGTAATAGGTTTACAACAGATATATAAT AGAACATAACAGGTGATCTTCTGAACAAAATTTAAAATGCAGCAAAAGAAATCCTATCAGCATT CTAGATCAAGCTACCGGAATCCATTGTACAATGTCATCTATTTGGACGTGGGTGAACCCAAATG CATCCATGAGAAAATAAAAATACAATTGTAAAATAGTCATCAGCTACCTGAAGGGCGAGGGACA TTTAAACCACGTCTTGGGATCAAAATCTCAAGATGACCCTTTAACTGTTTCACAACCTTCTGCA GAATTTGATGCCGCTCCGTCAAACTTTGGTGGATAACACTGGTGTCTCCAGCATAAAGGATGTC AAAAACAACAT

			
						 Conservation Information
					
						Conserved circRNAs
						
							osa_circ_025126* osi_circ_005704* osi_circ_014749 osi_circ_005705* 
osi_circ_014750 						
					
						PMCS
						0.125169932

Conservation Information
Conserved circRNAs	osa_circ_025126* osi_circ_005704* osi_circ_014749 osi_circ_005705* osi_circ_014750
PMCS	0.125169932

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							11680568-11676186(+)
11676206-11676146(-)
						
						Potential amino acid sequence
						
							MPLRQTLVDNTGVSSIKDVKNNIENQVGKYQGFSLET*(+)
MKTDVSGLKGETLIFANLIFYVVFDILYAGDTSVIHQSLTERHQILQKVVKQLKGHLEILIPRR
GLNVPRPSDEPCWSIIAHNAEDVDKFFKETIENRDEGIVLKDLDSKWEPGDRNGKWLKLKPDYI
HAGADLDVIIIGGYYGSGRQGGEVAQFLVGLAVPSDDNSYPKRFLSFCRVGTGLSDEERDALVT
KLNPYFRKNEYPKKPPKFYEVTNNSKERPDVWIESPDKSVIISVTSDIRTIKSEVFAAPYCLRF
PRIQRVRYDKPWHECLDVQAFVDIVHSNNGTIQRVADDNSLKNDDTKHSRTNKKVEKCVSIIPS
HFMKTDVSGLKGETLIFANLIFYVVFDILYAGDTSVIHQSLTERHQILQKVVKQLKGHLEILIP
RRGLNVPRPSDEPCWSIIAHNAEDVDKFFKETIENRDEGIVLKDLDSKWEPGDRNGKWLKLKPD
YIHAGADLDVIIIGGYYGSGRQGGEVAQFLVGLAVPSDDNSYPKRFLSFCRVGTGLSDEERDAL
VTKLNPYFRKNEYPKKPPKFYEVTNNSKERPDVWIESPDKSVIISVTSDIRTIKSEVFAAPYCL
RFPRIQRVRYDKPWHECLDVQAFVDIVHSNNGTIQRVADDNSLKNDDTKHSRTNKKVEKCVSII
PSHFMKTDVSGLKGETLIFANLIFYVVFDILYAGDTSVIHQSLTERHQILQKVVKQLKGHLEIL
IPRRGLNVPRPSDEPCWSIIAHNAEDVDKFFKETIENRDEGIVLKDLDSKWEPGDRNGKWLKLK
PDYIHAGADLDVIIIGGYYGSGRQGGEVAQFLVGLAVPSDDNSYPKRFLSFCRVGTGLSDEERD
ALVTKLNPYFRKNEYPKKPPKFYEVTNNSKERPDVWIESPDKSVIISVTSDIRTIKSEVFAAPY
CLRFPRIQRVRYDKPWHECLDVQAFVDIVHSNNGTIQRVADDNSLKNDDTKHSRTNKKVEKCVS
IIPSHFMKTDVSGLKGETLIFANLIF(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	11680568-11676186(+) 11676206-11676146(-)
Potential amino acid sequence	MPLRQTLVDNTGVSSIKDVKNNIENQVGKYQGFSLET*(+) MKTDVSGLKGETLIFANLIFYVVFDILYAGDTSVIHQSLTERHQILQKVVKQLKGHLEILIPRR GLNVPRPSDEPCWSIIAHNAEDVDKFFKETIENRDEGIVLKDLDSKWEPGDRNGKWLKLKPDYI HAGADLDVIIIGGYYGSGRQGGEVAQFLVGLAVPSDDNSYPKRFLSFCRVGTGLSDEERDALVT KLNPYFRKNEYPKKPPKFYEVTNNSKERPDVWIESPDKSVIISVTSDIRTIKSEVFAAPYCLRF PRIQRVRYDKPWHECLDVQAFVDIVHSNNGTIQRVADDNSLKNDDTKHSRTNKKVEKCVSIIPS HFMKTDVSGLKGETLIFANLIFYVVFDILYAGDTSVIHQSLTERHQILQKVVKQLKGHLEILIP RRGLNVPRPSDEPCWSIIAHNAEDVDKFFKETIENRDEGIVLKDLDSKWEPGDRNGKWLKLKPD YIHAGADLDVIIIGGYYGSGRQGGEVAQFLVGLAVPSDDNSYPKRFLSFCRVGTGLSDEERDAL VTKLNPYFRKNEYPKKPPKFYEVTNNSKERPDVWIESPDKSVIISVTSDIRTIKSEVFAAPYCL RFPRIQRVRYDKPWHECLDVQAFVDIVHSNNGTIQRVADDNSLKNDDTKHSRTNKKVEKCVSII PSHFMKTDVSGLKGETLIFANLIFYVVFDILYAGDTSVIHQSLTERHQILQKVVKQLKGHLEIL IPRRGLNVPRPSDEPCWSIIAHNAEDVDKFFKETIENRDEGIVLKDLDSKWEPGDRNGKWLKLK PDYIHAGADLDVIIIGGYYGSGRQGGEVAQFLVGLAVPSDDNSYPKRFLSFCRVGTGLSDEERD ALVTKLNPYFRKNEYPKKPPKFYEVTNNSKERPDVWIESPDKSVIISVTSDIRTIKSEVFAAPY CLRFPRIQRVRYDKPWHECLDVQAFVDIVHSNNGTIQRVADDNSLKNDDTKHSRTNKKVEKCVS IIPSHFMKTDVSGLKGETLIFANLIF(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020; Ma et al., 2021b

circRNA

Detail information of Zm00001d002390_circ_g.3

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