Plant Circular RNA Database

Detail information of Zm00001d017308_circ_g.1

			
						 General Information
					
						CircRNA Name
						Zm00001d017308_circ_g.1
					
						ID in PlantcircBase
						zma_circ_008763
					
						Alias
						Zm05circ00114
					
						Organism
						
							Zea mays						
					
						Position
						
							chr5: 192351078-192381971  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Zm00001d017308						
					
						Parent gene annotation
						
							B-block binding subunit of TFIIIC
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d017308_circ_g.2 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d017308_T045:11
Zm00001d017308_T004:15
Zm00001d017308_T051:10
Zm00001d017308_T005:14
Zm00001d017308_T031:16
Zm00001d017308_T048:7
Zm00001d017308_T054:4
Zm00001d017308_T015:17
Zm00001d017308_T053:9
Zm00001d017308_T012:11
Zm00001d017308_T043:12
Zm00001d017308_T028:7
Zm00001d017308_T033:16
Zm00001d017308_T019:12
Zm00001d017308_T002:16
Zm00001d017308_T035:16
Zm00001d017308_T007:16
Zm00001d017308_T047:10
Zm00001d017308_T056:7
Zm00001d017308_T023:15
Zm00001d017308_T017:11
Zm00001d017308_T057:2
Zm00001d017308_T059:7
Zm00001d017308_T037:7
Zm00001d017308_T042:14
Zm00001d017308_T006:16
Zm00001d017308_T044:11
Zm00001d017308_T018:16
Zm00001d017308_T052:7
Zm00001d017308_T001:6
Zm00001d017308_T036:5
Zm00001d017308_T046:8
Zm00001d017308_T058:7
Zm00001d017308_T026:15
Zm00001d017308_T024:13
Zm00001d017308_T055:6
Zm00001d017308_T022:16
Zm00001d017308_T040:14
Zm00001d017308_T014:16
Zm00001d017308_T029:7
Zm00001d017308_T020:16
Zm00001d017308_T050:11
Zm00001d017308_T009:16
Zm00001d017308_T021:16
Zm00001d017308_T049:11

General Information
CircRNA Name	Zm00001d017308_circ_g.1
ID in PlantcircBase	zma_circ_008763
Alias	Zm05circ00114
Organism	Zea mays
Position	chr5: 192351078-192381971 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2
Parent gene	Zm00001d017308
Parent gene annotation	B-block binding subunit of TFIIIC
Parent gene strand	-
Alternative splicing	Zm00001d017308_circ_g.2
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d017308_T045:11 Zm00001d017308_T004:15 Zm00001d017308_T051:10 Zm00001d017308_T005:14 Zm00001d017308_T031:16 Zm00001d017308_T048:7 Zm00001d017308_T054:4 Zm00001d017308_T015:17 Zm00001d017308_T053:9 Zm00001d017308_T012:11 Zm00001d017308_T043:12 Zm00001d017308_T028:7 Zm00001d017308_T033:16 Zm00001d017308_T019:12 Zm00001d017308_T002:16 Zm00001d017308_T035:16 Zm00001d017308_T007:16 Zm00001d017308_T047:10 Zm00001d017308_T056:7 Zm00001d017308_T023:15 Zm00001d017308_T017:11 Zm00001d017308_T057:2 Zm00001d017308_T059:7 Zm00001d017308_T037:7 Zm00001d017308_T042:14 Zm00001d017308_T006:16 Zm00001d017308_T044:11 Zm00001d017308_T018:16 Zm00001d017308_T052:7 Zm00001d017308_T001:6 Zm00001d017308_T036:5 Zm00001d017308_T046:8 Zm00001d017308_T058:7 Zm00001d017308_T026:15 Zm00001d017308_T024:13 Zm00001d017308_T055:6 Zm00001d017308_T022:16 Zm00001d017308_T040:14 Zm00001d017308_T014:16 Zm00001d017308_T029:7 Zm00001d017308_T020:16 Zm00001d017308_T050:11 Zm00001d017308_T009:16 Zm00001d017308_T021:16 Zm00001d017308_T049:11

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CACCGTAGCTGATTTCAAGCAGGCTTACATTTCTCCATGCTCTGTGCCCATATGCCATCCTGTA
GTCGAGATCAACTTTTATATCTGACACAACAAGAGCcctgcagtgtggtcggagccattggcac
aggttcttcaaaaacccgaacatgaaggttcccatcgagcgttagcttttctagcagggtcctg
caagtctg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 4498
Transcript exons: 192351078-192351174,192351259-192351297,192354028-192354
492,192354666-192354724,192355075-192355852,192365776-19
2366117,192366195-192366663,192366775-192367067,19236812
8-192368283,192376677-192376949,192377174-192377923,1923
78937-192379025,192379726-192380092,192380635-192380820,
192381511-192381573,192381900-192381971
CCTGCAGTGTGGTCGGAGCCATTGGCACAGGTTCTTCAAAAACCCGAACATGAAGGTTCCCATC
GAGCGTTAGCTTTTCTAGCAGGGTCCTGCAAGTCTGAGGATTCAATACATCCATCCGACGGATA
ACATCTTCCTCCGATAATCCTGGATAGTGCATGACATAACCAATAACTCGGCGACTTAAACCTT
CATAGAGAGTGCTATTAGTACTACCATCACCATTTATCCATGGTAATATAGGCTGATAACAATG
CCTTTCACAATTATGATAGAAACTACTCTCCTTATTGTTCTCTCCTGGAGTAGATAACCTTTCC
GCATCCCCAGGATCTTTGCTGTGCATGTAAGGTGGGCTCAACTTGCTTTGAACATTAATTACTG
TCACTGTGTGCCCATCACCAAGCATTTTTATTGGACCAGGAAAATTAATAGGCTTGGTATGCTT
CTCTTTCAGTAGATTTTTTGTGTTTTCATTATCAACAAATTGAGAAGTTGGAGGATCTGTACAG
CAGCAACTATCACATTCTGCAAGTGTAGCTATATGATACTTTGACGAATGTAATGAGTCCACAA
TCTGAACGCCATCATATGCATTGACCTTAACAGCCAGCTGAAATCTTTTGAGAGTGTCAACAAT
TATTAAGACCAGCTGCATGGCAGCTTGATGAATAACACGAAATGCATTCCTGAACAGTTCAGGA
GACAATGTGAACAATTCATTTTGGTGCTCAGATACTGGTGATAACTCTTCCGCATAATTTGTCA
TGGCATCCCAAGGCCATCCACTGTATGAGTTCTCCAACTGAGATTCAGACAATAAATGCCTATA
TGAACTTAAGCAATTTGAAAACAATGGCATGATGTGCCTTTCTGCATGCAAATCAACATTCTTT
TTGCTCATTGCCCAGCTTGAAGTAAAAATAGAGGATTCTTTACCATGAAACTCTTGCAAGAAAT
TGCTTGTTTGAATTCTATGAAGATTTAGACCTATTTGGATAGCAGGAAATCCTTTCTCCCGGCG
GTAGCAAAAGTCACTTTCTATCTTTGGCAAAGGCTTCGGTTTCTTAGCCTTGCTGCTTTTCAGT
TTCACTGTATCAGCCTTGCGCTTATGACTGTTGTCAGCCAAACCGCTGGTATCTACGACCAAAG
GACCAGAGCTGTTAGGCTCATCAGCCTCACCAACTCCTTCACTAGGCAAGAAAGGTGAAATGAG
AAGGTTTCCTGACAAAACCAGAGAGAATAGATGAACAATTTCTCCACATTGTATATCTGGATAC
AAATAAACTCCACTGTCTGTAGTATTCTTTTGCTGAGCTATAAGCCAATTAGAAAATATAGAAG
CCTTTTTCCCTGAACCAAATGGAAAAGGTGAACAACAAGCATTGGTTAAGAATTGTGAAGAAAG
GGTGTACGGCTTCCCACCACTCCCAGTAACCAAGAATTTTTTTTCTTTAAGAAAGGAAACAGCA
GTAAAAATCTCGCTCTCTGAATAAAGCTGCAGTGTTGCTGCTAGTGAAGCTTGTACATTTGATC
CTAAAGATGTGTTGAGGAAAACCAACTTCAGAAGCTCCAAGGCATTTGCAACAGCCAATGATTT
CCATATGCCTCTTTCAATAATCTTATTTCGGTGATCCTTAATGATTTTTTCTTGAGGTTTGCAG
AAGACTTCCATGTTTTCACTTTCTGCATTTGAATGTCTGCATGATTTTTCAGGATCACAGAACC
CGCTTTCTGAAACTGCACTCGTTTTGGTTTCACCTAGTATAGCCTGATTATTTGGCAGTTCCTG
TGAACATATTGTGTCCTTTGTGACATCATTATCATTGTTAATGTTTTTTTGATTAACAGGCCCA
ATTCTCTTGGCCTGATCTATTTTTTCTGTTTGAATTAATTCAAGGACTTCATTAAGTGCACTCT
TTATCTCTGGAACTTCAAAGTCATCCCAATTGAATTGCTCACAATCTGAATCTAAACTGTTTTC
TTGACTTCTGTTTGAAATCTGGGGAAACAATCTTCTCCTTTTCAAACTCCTTTCCTTTTCAAGA
TATCTAACATACCGTTCCCCAAGAAGGTTACATAAACACATGACAGCTCCTCTTATCTTTCCGT
TTGTTTTCAATAGTACTGCCATCCTTCTAAGACATGTATGTGGTGGAGCTGGAAGATCAGAGAG
AGACTTCCAAGGTACACGATAATATCTTGCCCCAAGTACTGCACGCACTCTAATGTATGCCATC
AGCAGTTTTCTATCAGATTCACATGTCCAAAAGAATCTTTTACTTCTCATGCAGCTCTTTCTTA
AGATAGCATACCGACTGATCATTGGTACTTCTTCATCAACAATAGGTTGCTCCAATATTTGTTC
AGCAGATCCACTTGCTTGTACTGTACGTTTCAGAAGCTTCAGGCTGGTCCCATCGGCACGTCTC
TTTCTTCTCACAGGAGTCAATCCAGAACCAACTCTTTGCTGCTTTTGTTTAGAAGTAAAGCTGG
GCTGTTCATGGAGCCGAGATTGCCTTTCATATGAAAGGCGAAGTACCTGCTCTACAGAAAGATT
CAGTTCTCTTGCTATTCTAACACAGTCTTTAAAAGGAATTTTCCCCTTCTCACCAACATCCATA
ATACGCTGTTGCAACTCCAGTCGTTGTTCAGTAGTCATGACTCTAAGTGAACACCATGAACGAC
GATGAGAAACCTCCGGGACAGAACTGCCAGGGAAGGCACTTAACGGGTCAGCCAAACCAGCTGT
TAAATAACAGCACTCTAGTGTTTCCCAATAAGAATCAACAAACTCTTTCTTTGAAAGTACAAAA
TCATGCCGAATTTTCCGATGATTGTTCAGTTGGGAAGATGGAAGAATTCTTGGCATGGGTTCTT
CGATGTAAGGCCTGAGCTCCATCGAATGTGTATACATGGCATTTGACGATACACCAGCATCTTC
TAAGAATTCTTTTGCAAGCTGAACCAGCTTGAGCTTGTCCAAAATATTTACTAAACGTGAGAGT
CGGCCATTGGCATGAGTATCCAAGATCTGATTGTATTCCTCTGTAGGTATTTCTGAAAGTGTTT
TTCCAAGCCTACACAACGTTATCATGTTATCAATCTTCTTTGCTGACCCAACAATTTGTAGAAA
GAGTTCAAGGGGCATTTCTTTCATAGCTGCTTCCATAGAAAATAACAGGCATGATTGATTAAGG
CTCTTATCATAATGCCCTGCTTTGGTACAACCAAATGCATTGCACCAATTTGGCAAAGAATTGA
CATAAGCCCACAGAAATTTATGGAATAACTTTGCTCGAATCATCTTTGCGCCTATGAATCCATT
TGCATACATAGCTTCTAATAGTAATGGTTTGTAAACTTTAACTCTGCGTGAAATCCTCAGACCA
GGTATGGCAGTCATATGTTGATTTTGCTTCACTTTAGCTGCTGCACCTGCGCGAGATTCGGTGT
CAAAGTTCCTTTGTCTGGTCCTAAATTGCTCCACAAGTTCTGGTGACACGTCTCCAACAGAAGA
ATGCAGTATTACATCAAAGAGACGACTGCGAGCATAATTTGTCACCAATGGAGCACTGACTTTG
ATACATTTACAGCTTCCCTCTTGCTGAAGCTTATTCAACGTGCGAGTCAATGTCTTCCTATCCA
TTATTTTCCCGTCCTTCTTTTCAAGCCGTTCTAACCATTTATGTAACTCCACCTTCAGTACAAA
TTTCTTCTTCTTTAACATGTGTAGAATCCTTCTATGGCGTTGATCATCAGAAGATAATGGACGG
CACCGACGCCTCCTCTGATTCGAAGGAAGTTTATCTTCTTCAACTAACTGGGAAACTGCAGCAG
AAGCATCACGGTTGTTCTGGATATGATGTCCAATTGGTTTGTCATGGTTCTCTTCTTCAAGCAA
GAGTAATTTGCCCTGTGAACTAGGTGATTCCAAATCTTTAGATGAAACTAGGGACCACAAATCC
GAACAATCATCACAGTCTTCTGAGAGTGCCTCAAAATTTTGCAGAGCAGTACCAGCTTTGTAGA
GTGAGAAGTTTTTTGAAGTCCAAATTCGGTACTGCGATGTCTTGTCTGGAACTTCTGCTTCCCA
TGTTAGGTTGAATTTTTTTAGCATGGATGATACTCGTTTATGAAGTTTTTTTGAATTATTGAGT
CCAAGATGTTTGCCAATCTCAACAAGTGTAATACCTTTTGTCCCTTGGCTACTGATCATATCAT
ATATACAGTTCTCTAATGGAAGTTCCAAAATTTGATCAGTTGCCTGACCTTTTTTAACAAATTT
AAAATTTGAAGCTATACTTTTTGGCTGAAACTCATTTGGATCAAAATTTTTCAGTAGACGCAAA
CAACGGACAACCTTATCATCATCTTCGGCATCAAATATCTCCACAAGTCGTGCATCTATTAATC
TATGCAATACATTTCTCCATGCTCTGTGCCCATATGCCATCCTGTAGTCGAGATCAACTTTTAT
ATCTGACACAACAAGAGC
						
					

						Genomic sequence
						
							TOO LONG (>5KB) TO SHOW GENOMIC SEQUENCE OF THIS CIRCULAR RNA. PLEASE FIND THE CORRESPONDING GENOMIC SEQUENCE AT DOWNLOAD SECTION.						
					

			
		

Sequences
Splice junction sequence	CACCGTAGCTGATTTCAAGCAGGCTTACATTTCTCCATGCTCTGTGCCCATATGCCATCCTGTA GTCGAGATCAACTTTTATATCTGACACAACAAGAGCcctgcagtgtggtcggagccattggcac aggttcttcaaaaacccgaacatgaaggttcccatcgagcgttagcttttctagcagggtcctg caagtctg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 4498 Transcript exons: 192351078-192351174,192351259-192351297,192354028-192354 492,192354666-192354724,192355075-192355852,192365776-19 2366117,192366195-192366663,192366775-192367067,19236812 8-192368283,192376677-192376949,192377174-192377923,1923 78937-192379025,192379726-192380092,192380635-192380820, 192381511-192381573,192381900-192381971 CCTGCAGTGTGGTCGGAGCCATTGGCACAGGTTCTTCAAAAACCCGAACATGAAGGTTCCCATC GAGCGTTAGCTTTTCTAGCAGGGTCCTGCAAGTCTGAGGATTCAATACATCCATCCGACGGATA ACATCTTCCTCCGATAATCCTGGATAGTGCATGACATAACCAATAACTCGGCGACTTAAACCTT CATAGAGAGTGCTATTAGTACTACCATCACCATTTATCCATGGTAATATAGGCTGATAACAATG CCTTTCACAATTATGATAGAAACTACTCTCCTTATTGTTCTCTCCTGGAGTAGATAACCTTTCC GCATCCCCAGGATCTTTGCTGTGCATGTAAGGTGGGCTCAACTTGCTTTGAACATTAATTACTG TCACTGTGTGCCCATCACCAAGCATTTTTATTGGACCAGGAAAATTAATAGGCTTGGTATGCTT CTCTTTCAGTAGATTTTTTGTGTTTTCATTATCAACAAATTGAGAAGTTGGAGGATCTGTACAG CAGCAACTATCACATTCTGCAAGTGTAGCTATATGATACTTTGACGAATGTAATGAGTCCACAA TCTGAACGCCATCATATGCATTGACCTTAACAGCCAGCTGAAATCTTTTGAGAGTGTCAACAAT TATTAAGACCAGCTGCATGGCAGCTTGATGAATAACACGAAATGCATTCCTGAACAGTTCAGGA GACAATGTGAACAATTCATTTTGGTGCTCAGATACTGGTGATAACTCTTCCGCATAATTTGTCA TGGCATCCCAAGGCCATCCACTGTATGAGTTCTCCAACTGAGATTCAGACAATAAATGCCTATA TGAACTTAAGCAATTTGAAAACAATGGCATGATGTGCCTTTCTGCATGCAAATCAACATTCTTT TTGCTCATTGCCCAGCTTGAAGTAAAAATAGAGGATTCTTTACCATGAAACTCTTGCAAGAAAT TGCTTGTTTGAATTCTATGAAGATTTAGACCTATTTGGATAGCAGGAAATCCTTTCTCCCGGCG GTAGCAAAAGTCACTTTCTATCTTTGGCAAAGGCTTCGGTTTCTTAGCCTTGCTGCTTTTCAGT TTCACTGTATCAGCCTTGCGCTTATGACTGTTGTCAGCCAAACCGCTGGTATCTACGACCAAAG GACCAGAGCTGTTAGGCTCATCAGCCTCACCAACTCCTTCACTAGGCAAGAAAGGTGAAATGAG AAGGTTTCCTGACAAAACCAGAGAGAATAGATGAACAATTTCTCCACATTGTATATCTGGATAC AAATAAACTCCACTGTCTGTAGTATTCTTTTGCTGAGCTATAAGCCAATTAGAAAATATAGAAG CCTTTTTCCCTGAACCAAATGGAAAAGGTGAACAACAAGCATTGGTTAAGAATTGTGAAGAAAG GGTGTACGGCTTCCCACCACTCCCAGTAACCAAGAATTTTTTTTCTTTAAGAAAGGAAACAGCA GTAAAAATCTCGCTCTCTGAATAAAGCTGCAGTGTTGCTGCTAGTGAAGCTTGTACATTTGATC CTAAAGATGTGTTGAGGAAAACCAACTTCAGAAGCTCCAAGGCATTTGCAACAGCCAATGATTT CCATATGCCTCTTTCAATAATCTTATTTCGGTGATCCTTAATGATTTTTTCTTGAGGTTTGCAG AAGACTTCCATGTTTTCACTTTCTGCATTTGAATGTCTGCATGATTTTTCAGGATCACAGAACC CGCTTTCTGAAACTGCACTCGTTTTGGTTTCACCTAGTATAGCCTGATTATTTGGCAGTTCCTG TGAACATATTGTGTCCTTTGTGACATCATTATCATTGTTAATGTTTTTTTGATTAACAGGCCCA ATTCTCTTGGCCTGATCTATTTTTTCTGTTTGAATTAATTCAAGGACTTCATTAAGTGCACTCT TTATCTCTGGAACTTCAAAGTCATCCCAATTGAATTGCTCACAATCTGAATCTAAACTGTTTTC TTGACTTCTGTTTGAAATCTGGGGAAACAATCTTCTCCTTTTCAAACTCCTTTCCTTTTCAAGA TATCTAACATACCGTTCCCCAAGAAGGTTACATAAACACATGACAGCTCCTCTTATCTTTCCGT TTGTTTTCAATAGTACTGCCATCCTTCTAAGACATGTATGTGGTGGAGCTGGAAGATCAGAGAG AGACTTCCAAGGTACACGATAATATCTTGCCCCAAGTACTGCACGCACTCTAATGTATGCCATC AGCAGTTTTCTATCAGATTCACATGTCCAAAAGAATCTTTTACTTCTCATGCAGCTCTTTCTTA AGATAGCATACCGACTGATCATTGGTACTTCTTCATCAACAATAGGTTGCTCCAATATTTGTTC AGCAGATCCACTTGCTTGTACTGTACGTTTCAGAAGCTTCAGGCTGGTCCCATCGGCACGTCTC TTTCTTCTCACAGGAGTCAATCCAGAACCAACTCTTTGCTGCTTTTGTTTAGAAGTAAAGCTGG GCTGTTCATGGAGCCGAGATTGCCTTTCATATGAAAGGCGAAGTACCTGCTCTACAGAAAGATT CAGTTCTCTTGCTATTCTAACACAGTCTTTAAAAGGAATTTTCCCCTTCTCACCAACATCCATA ATACGCTGTTGCAACTCCAGTCGTTGTTCAGTAGTCATGACTCTAAGTGAACACCATGAACGAC GATGAGAAACCTCCGGGACAGAACTGCCAGGGAAGGCACTTAACGGGTCAGCCAAACCAGCTGT TAAATAACAGCACTCTAGTGTTTCCCAATAAGAATCAACAAACTCTTTCTTTGAAAGTACAAAA TCATGCCGAATTTTCCGATGATTGTTCAGTTGGGAAGATGGAAGAATTCTTGGCATGGGTTCTT CGATGTAAGGCCTGAGCTCCATCGAATGTGTATACATGGCATTTGACGATACACCAGCATCTTC TAAGAATTCTTTTGCAAGCTGAACCAGCTTGAGCTTGTCCAAAATATTTACTAAACGTGAGAGT CGGCCATTGGCATGAGTATCCAAGATCTGATTGTATTCCTCTGTAGGTATTTCTGAAAGTGTTT TTCCAAGCCTACACAACGTTATCATGTTATCAATCTTCTTTGCTGACCCAACAATTTGTAGAAA GAGTTCAAGGGGCATTTCTTTCATAGCTGCTTCCATAGAAAATAACAGGCATGATTGATTAAGG CTCTTATCATAATGCCCTGCTTTGGTACAACCAAATGCATTGCACCAATTTGGCAAAGAATTGA CATAAGCCCACAGAAATTTATGGAATAACTTTGCTCGAATCATCTTTGCGCCTATGAATCCATT TGCATACATAGCTTCTAATAGTAATGGTTTGTAAACTTTAACTCTGCGTGAAATCCTCAGACCA GGTATGGCAGTCATATGTTGATTTTGCTTCACTTTAGCTGCTGCACCTGCGCGAGATTCGGTGT CAAAGTTCCTTTGTCTGGTCCTAAATTGCTCCACAAGTTCTGGTGACACGTCTCCAACAGAAGA ATGCAGTATTACATCAAAGAGACGACTGCGAGCATAATTTGTCACCAATGGAGCACTGACTTTG ATACATTTACAGCTTCCCTCTTGCTGAAGCTTATTCAACGTGCGAGTCAATGTCTTCCTATCCA TTATTTTCCCGTCCTTCTTTTCAAGCCGTTCTAACCATTTATGTAACTCCACCTTCAGTACAAA TTTCTTCTTCTTTAACATGTGTAGAATCCTTCTATGGCGTTGATCATCAGAAGATAATGGACGG CACCGACGCCTCCTCTGATTCGAAGGAAGTTTATCTTCTTCAACTAACTGGGAAACTGCAGCAG AAGCATCACGGTTGTTCTGGATATGATGTCCAATTGGTTTGTCATGGTTCTCTTCTTCAAGCAA GAGTAATTTGCCCTGTGAACTAGGTGATTCCAAATCTTTAGATGAAACTAGGGACCACAAATCC GAACAATCATCACAGTCTTCTGAGAGTGCCTCAAAATTTTGCAGAGCAGTACCAGCTTTGTAGA GTGAGAAGTTTTTTGAAGTCCAAATTCGGTACTGCGATGTCTTGTCTGGAACTTCTGCTTCCCA TGTTAGGTTGAATTTTTTTAGCATGGATGATACTCGTTTATGAAGTTTTTTTGAATTATTGAGT CCAAGATGTTTGCCAATCTCAACAAGTGTAATACCTTTTGTCCCTTGGCTACTGATCATATCAT ATATACAGTTCTCTAATGGAAGTTCCAAAATTTGATCAGTTGCCTGACCTTTTTTAACAAATTT AAAATTTGAAGCTATACTTTTTGGCTGAAACTCATTTGGATCAAAATTTTTCAGTAGACGCAAA CAACGGACAACCTTATCATCATCTTCGGCATCAAATATCTCCACAAGTCGTGCATCTATTAATC TATGCAATACATTTCTCCATGCTCTGTGCCCATATGCCATCCTGTAGTCGAGATCAACTTTTAT ATCTGACACAACAAGAGC
Genomic sequence	TOO LONG (>5KB) TO SHOW GENOMIC SEQUENCE OF THIS CIRCULAR RNA. PLEASE FIND THE CORRESPONDING GENOMIC SEQUENCE AT DOWNLOAD SECTION.

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.299052636

Conservation Information
Conserved circRNAs	NA
PMCS	0.299052636

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							192381909-192351127(+)
192381931-192381945(-)
192351142-192381945(-)
						
					

						Potential amino acid sequence
						
							MLCAHMPSCSRDQLLYLTQQEPCSVVGAIGTGSSKTRT*(+)
MAYGHRAWRNVLHRLIDARLVEIFDAEDDDKVVRCLRLLKNFDPNEFQPKSIASNFKFVKKGQA
TDQILELPLENCIYDMISSQGTKGITLVEIGKHLGLNNSKKLHKRVSSMLKKFNLTWEAEVPDK
TSQYRIWTSKNFSLYKAGTALQNFEALSEDCDDCSDLWSLVSSKDLESPSSQGKLLLLEEENHD
KPIGHHIQNNRDASAAVSQLVEEDKLPSNQRRRRCRPLSSDDQRHRRILHMLKKKKFVLKVELH
KWLERLEKKDGKIMDRKTLTRTLNKLQQEGSCKCIKVSAPLVTNYARSRLFDVILHSSVGDVSP
ELVEQFRTRQRNFDTESRAGAAAKVKQNQHMTAIPGLRISRRVKVYKPLLLEAMYANGFIGAKM
IRAKLFHKFLWAYVNSLPNWCNAFGCTKAGHYDKSLNQSCLLFSMEAAMKEMPLELFLQIVGSA
KKIDNMITLCRLGKTLSEIPTEEYNQILDTHANGRLSRLVNILDKLKLVQLAKEFLEDAGVSSN
AMYTHSMELRPYIEEPMPRILPSSQLNNHRKIRHDFVLSKKEFVDSYWETLECCYLTAGLADPL
SAFPGSSVPEVSHRRSWCSLRVMTTEQRLELQQRIMDVGEKGKIPFKDCVRIARELNLSVEQVL
RLSYERQSRLHEQPSFTSKQKQQRVGSGLTPVRRKRRADGTSLKLLKRTVQASGSAEQILEQPI
VDEEVPMISRYAILRKSCMRSKRFFWTCESDRKLLMAYIRVRAVLGARYYRVPWKSLSDLPAPP
HTCLRRMAVLLKTNGKIRGAVMCLCNLLGERYVRYLEKERSLKRRRLFPQISNRSQENSLDSDC
EQFNWDDFEVPEIKSALNEVLELIQTEKIDQAKRIGPVNQKNINNDNDVTKDTICSQELPNNQA
ILGETKTSAVSESGFCDPEKSCRHSNAESENMEVFCKPQEKIIKDHRNKIIERGIWKSLAVANA
LELLKLVFLNTSLGSNVQASLAATLQLYSESEIFTAVSFLKEKKFLVTGSGGKPYTLSSQFLTN
ACCSPFPFGSGKKASIFSNWLIAQQKNTTDSGVYLYPDIQCGEIVHLFSLVLSGNLLISPFLPS
EGVGEADEPNSSGPLVVDTSGLADNSHKRKADTVKLKSSKAKKPKPLPKIESDFCYRREKGFPA
IQIGLNLHRIQTSNFLQEFHGKESSIFTSSWAMSKKNVDLHAERHIMPLFSNCLSSYRHLLSES
QLENSYSGWPWDAMTNYAEELSPVSEHQNELFTLSPELFRNAFRVIHQAAMQLVLIIVDTLKRF
QLAVKVNAYDGVQIVDSLHSSKYHIATLAECDSCCCTDPPTSQFVDNENTKNLLKEKHTKPINF
PGPIKMLGDGHTVTVINVQSKLSPPYMHSKDPGDAERLSTPGENNKESSFYHNCERHCYQPILP
WINGDGSTNSTLYEGLSRRVIGYVMHYPGLSEEDVIRRMDVLNPQTCRTLLEKLTLDGNLHVRV
FEEPVPMAPTTLQGSCCVRYKS*(-)
MGTFMFGFLKNLCQWLRPHCRALVVSDIKVDLDYRMAYGHRAWRNVLHRLIDARLVEIFDAEDD
DKVVRCLRLLKNFDPNEFQPKSIASNFKFVKKGQATDQILELPLENCIYDMISSQGTKGITLVE
IGKHLGLNNSKKLHKRVSSMLKKFNLTWEAEVPDKTSQYRIWTSKNFSLYKAGTALQNFEALSE
DCDDCSDLWSLVSSKDLESPSSQGKLLLLEEENHDKPIGHHIQNNRDASAAVSQLVEEDKLPSN
QRRRRCRPLSSDDQRHRRILHMLKKKKFVLKVELHKWLERLEKKDGKIMDRKTLTRTLNKLQQE
GSCKCIKVSAPLVTNYARSRLFDVILHSSVGDVSPELVEQFRTRQRNFDTESRAGAAAKVKQNQ
HMTAIPGLRISRRVKVYKPLLLEAMYANGFIGAKMIRAKLFHKFLWAYVNSLPNWCNAFGCTKA
GHYDKSLNQSCLLFSMEAAMKEMPLELFLQIVGSAKKIDNMITLCRLGKTLSEIPTEEYNQILD
THANGRLSRLVNILDKLKLVQLAKEFLEDAGVSSNAMYTHSMELRPYIEEPMPRILPSSQLNNH
RKIRHDFVLSKKEFVDSYWETLECCYLTAGLADPLSAFPGSSVPEVSHRRSWCSLRVMTTEQRL
ELQQRIMDVGEKGKIPFKDCVRIARELNLSVEQVLRLSYERQSRLHEQPSFTSKQKQQRVGSGL
TPVRRKRRADGTSLKLLKRTVQASGSAEQILEQPIVDEEVPMISRYAILRKSCMRSKRFFWTCE
SDRKLLMAYIRVRAVLGARYYRVPWKSLSDLPAPPHTCLRRMAVLLKTNGKIRGAVMCLCNLLG
ERYVRYLEKERSLKRRRLFPQISNRSQENSLDSDCEQFNWDDFEVPEIKSALNEVLELIQTEKI
DQAKRIGPVNQKNINNDNDVTKDTICSQELPNNQAILGETKTSAVSESGFCDPEKSCRHSNAES
ENMEVFCKPQEKIIKDHRNKIIERGIWKSLAVANALELLKLVFLNTSLGSNVQASLAATLQLYS
ESEIFTAVSFLKEKKFLVTGSGGKPYTLSSQFLTNACCSPFPFGSGKKASIFSNWLIAQQKNTT
DSGVYLYPDIQCGEIVHLFSLVLSGNLLISPFLPSEGVGEADEPNSSGPLVVDTSGLADNSHKR
KADTVKLKSSKAKKPKPLPKIESDFCYRREKGFPAIQIGLNLHRIQTSNFLQEFHGKESSIFTS
SWAMSKKNVDLHAERHIMPLFSNCLSSYRHLLSESQLENSYSGWPWDAMTNYAEELSPVSEHQN
ELFTLSPELFRNAFRVIHQAAMQLVLIIVDTLKRFQLAVKVNAYDGVQIVDSLHSSKYHIATLA
ECDSCCCTDPPTSQFVDNENTKNLLKEKHTKPINFPGPIKMLGDGHTVTVINVQSKLSPPYMHS
KDPGDAERLSTPGENNKESSFYHNCERHCYQPILPWINGDGSTNSTLYEGLSRRVIGYVMHYPG
LSEEDVIRRMDVLNPQTCRTLLEKLTLDGNLHVRVFEEPVPMAPTTLQGSCCVRYKS*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	192381909-192351127(+) 192381931-192381945(-) 192351142-192381945(-)
Potential amino acid sequence	MLCAHMPSCSRDQLLYLTQQEPCSVVGAIGTGSSKTRT(+) MAYGHRAWRNVLHRLIDARLVEIFDAEDDDKVVRCLRLLKNFDPNEFQPKSIASNFKFVKKGQA TDQILELPLENCIYDMISSQGTKGITLVEIGKHLGLNNSKKLHKRVSSMLKKFNLTWEAEVPDK TSQYRIWTSKNFSLYKAGTALQNFEALSEDCDDCSDLWSLVSSKDLESPSSQGKLLLLEEENHD KPIGHHIQNNRDASAAVSQLVEEDKLPSNQRRRRCRPLSSDDQRHRRILHMLKKKKFVLKVELH KWLERLEKKDGKIMDRKTLTRTLNKLQQEGSCKCIKVSAPLVTNYARSRLFDVILHSSVGDVSP ELVEQFRTRQRNFDTESRAGAAAKVKQNQHMTAIPGLRISRRVKVYKPLLLEAMYANGFIGAKM IRAKLFHKFLWAYVNSLPNWCNAFGCTKAGHYDKSLNQSCLLFSMEAAMKEMPLELFLQIVGSA KKIDNMITLCRLGKTLSEIPTEEYNQILDTHANGRLSRLVNILDKLKLVQLAKEFLEDAGVSSN AMYTHSMELRPYIEEPMPRILPSSQLNNHRKIRHDFVLSKKEFVDSYWETLECCYLTAGLADPL SAFPGSSVPEVSHRRSWCSLRVMTTEQRLELQQRIMDVGEKGKIPFKDCVRIARELNLSVEQVL RLSYERQSRLHEQPSFTSKQKQQRVGSGLTPVRRKRRADGTSLKLLKRTVQASGSAEQILEQPI VDEEVPMISRYAILRKSCMRSKRFFWTCESDRKLLMAYIRVRAVLGARYYRVPWKSLSDLPAPP HTCLRRMAVLLKTNGKIRGAVMCLCNLLGERYVRYLEKERSLKRRRLFPQISNRSQENSLDSDC EQFNWDDFEVPEIKSALNEVLELIQTEKIDQAKRIGPVNQKNINNDNDVTKDTICSQELPNNQA ILGETKTSAVSESGFCDPEKSCRHSNAESENMEVFCKPQEKIIKDHRNKIIERGIWKSLAVANA LELLKLVFLNTSLGSNVQASLAATLQLYSESEIFTAVSFLKEKKFLVTGSGGKPYTLSSQFLTN ACCSPFPFGSGKKASIFSNWLIAQQKNTTDSGVYLYPDIQCGEIVHLFSLVLSGNLLISPFLPS EGVGEADEPNSSGPLVVDTSGLADNSHKRKADTVKLKSSKAKKPKPLPKIESDFCYRREKGFPA IQIGLNLHRIQTSNFLQEFHGKESSIFTSSWAMSKKNVDLHAERHIMPLFSNCLSSYRHLLSES QLENSYSGWPWDAMTNYAEELSPVSEHQNELFTLSPELFRNAFRVIHQAAMQLVLIIVDTLKRF QLAVKVNAYDGVQIVDSLHSSKYHIATLAECDSCCCTDPPTSQFVDNENTKNLLKEKHTKPINF PGPIKMLGDGHTVTVINVQSKLSPPYMHSKDPGDAERLSTPGENNKESSFYHNCERHCYQPILP WINGDGSTNSTLYEGLSRRVIGYVMHYPGLSEEDVIRRMDVLNPQTCRTLLEKLTLDGNLHVRV FEEPVPMAPTTLQGSCCVRYKS(-) MGTFMFGFLKNLCQWLRPHCRALVVSDIKVDLDYRMAYGHRAWRNVLHRLIDARLVEIFDAEDD DKVVRCLRLLKNFDPNEFQPKSIASNFKFVKKGQATDQILELPLENCIYDMISSQGTKGITLVE IGKHLGLNNSKKLHKRVSSMLKKFNLTWEAEVPDKTSQYRIWTSKNFSLYKAGTALQNFEALSE DCDDCSDLWSLVSSKDLESPSSQGKLLLLEEENHDKPIGHHIQNNRDASAAVSQLVEEDKLPSN QRRRRCRPLSSDDQRHRRILHMLKKKKFVLKVELHKWLERLEKKDGKIMDRKTLTRTLNKLQQE GSCKCIKVSAPLVTNYARSRLFDVILHSSVGDVSPELVEQFRTRQRNFDTESRAGAAAKVKQNQ HMTAIPGLRISRRVKVYKPLLLEAMYANGFIGAKMIRAKLFHKFLWAYVNSLPNWCNAFGCTKA GHYDKSLNQSCLLFSMEAAMKEMPLELFLQIVGSAKKIDNMITLCRLGKTLSEIPTEEYNQILD THANGRLSRLVNILDKLKLVQLAKEFLEDAGVSSNAMYTHSMELRPYIEEPMPRILPSSQLNNH RKIRHDFVLSKKEFVDSYWETLECCYLTAGLADPLSAFPGSSVPEVSHRRSWCSLRVMTTEQRL ELQQRIMDVGEKGKIPFKDCVRIARELNLSVEQVLRLSYERQSRLHEQPSFTSKQKQQRVGSGL TPVRRKRRADGTSLKLLKRTVQASGSAEQILEQPIVDEEVPMISRYAILRKSCMRSKRFFWTCE SDRKLLMAYIRVRAVLGARYYRVPWKSLSDLPAPPHTCLRRMAVLLKTNGKIRGAVMCLCNLLG ERYVRYLEKERSLKRRRLFPQISNRSQENSLDSDCEQFNWDDFEVPEIKSALNEVLELIQTEKI DQAKRIGPVNQKNINNDNDVTKDTICSQELPNNQAILGETKTSAVSESGFCDPEKSCRHSNAES ENMEVFCKPQEKIIKDHRNKIIERGIWKSLAVANALELLKLVFLNTSLGSNVQASLAATLQLYS ESEIFTAVSFLKEKKFLVTGSGGKPYTLSSQFLTNACCSPFPFGSGKKASIFSNWLIAQQKNTT DSGVYLYPDIQCGEIVHLFSLVLSGNLLISPFLPSEGVGEADEPNSSGPLVVDTSGLADNSHKR KADTVKLKSSKAKKPKPLPKIESDFCYRREKGFPAIQIGLNLHRIQTSNFLQEFHGKESSIFTS SWAMSKKNVDLHAERHIMPLFSNCLSSYRHLLSESQLENSYSGWPWDAMTNYAEELSPVSEHQN ELFTLSPELFRNAFRVIHQAAMQLVLIIVDTLKRFQLAVKVNAYDGVQIVDSLHSSKYHIATLA ECDSCCCTDPPTSQFVDNENTKNLLKEKHTKPINFPGPIKMLGDGHTVTVINVQSKLSPPYMHS KDPGDAERLSTPGENNKESSFYHNCERHCYQPILPWINGDGSTNSTLYEGLSRRVIGYVMHYPG LSEEDVIRRMDVLNPQTCRTLLEKLTLDGNLHVRVFEEPVPMAPTTLQGSCCVRYKS*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020

circRNA

Detail information of Zm00001d017308_circ_g.1

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