Plant Circular RNA Database

Detail information of Zm00001d017308_circ_g.2

			
						 General Information
					
						CircRNA Name
						Zm00001d017308_circ_g.2
					
						ID in PlantcircBase
						zma_circ_008764
					
						Alias
						zma_circ_0001963
					
						Organism
						
							Zea mays						
					
						Position
						
							chr5: 192365776-192368283  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d017308						
					
						Parent gene annotation
						
							B-block binding subunit of TFIIIC
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d017308_circ_g.1 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d017308_T005:4
Zm00001d017308_T009:4
Zm00001d017308_T018:4
Zm00001d017308_T047:4
Zm00001d017308_T040:4
Zm00001d017308_T044:4
Zm00001d017308_T021:4
Zm00001d017308_T029:2
Zm00001d017308_T046:4
Zm00001d017308_T012:4
Zm00001d017308_T004:4
Zm00001d017308_T050:4
Zm00001d017308_T033:4
Zm00001d017308_T048:3
Zm00001d017308_T006:4
Zm00001d017308_T002:4
Zm00001d017308_T045:4
Zm00001d017308_T037:2
Zm00001d017308_T023:4
Zm00001d017308_T043:4
Zm00001d017308_T049:4
Zm00001d017308_T017:4
Zm00001d017308_T028:2
Zm00001d017308_T022:4
Zm00001d017308_T051:3
Zm00001d017308_T042:4
Zm00001d017308_T024:4
Zm00001d017308_T007:4
Zm00001d017308_T015:4
Zm00001d017308_T020:4
Zm00001d017308_T019:4
Zm00001d017308_T031:4
Zm00001d017308_T026:4
Zm00001d017308_T014:4
Zm00001d017308_T035:4

General Information
CircRNA Name	Zm00001d017308_circ_g.2
ID in PlantcircBase	zma_circ_008764
Alias	zma_circ_0001963
Organism	Zea mays
Position	chr5: 192365776-192368283 JBrowse»
Reference genome	AGPv4.38
Type	ue-circRNA
Identification method	find_circ
Parent gene	Zm00001d017308
Parent gene annotation	B-block binding subunit of TFIIIC
Parent gene strand	-
Alternative splicing	Zm00001d017308_circ_g.1
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d017308_T005:4 Zm00001d017308_T009:4 Zm00001d017308_T018:4 Zm00001d017308_T047:4 Zm00001d017308_T040:4 Zm00001d017308_T044:4 Zm00001d017308_T021:4 Zm00001d017308_T029:2 Zm00001d017308_T046:4 Zm00001d017308_T012:4 Zm00001d017308_T004:4 Zm00001d017308_T050:4 Zm00001d017308_T033:4 Zm00001d017308_T048:3 Zm00001d017308_T006:4 Zm00001d017308_T002:4 Zm00001d017308_T045:4 Zm00001d017308_T037:2 Zm00001d017308_T023:4 Zm00001d017308_T043:4 Zm00001d017308_T049:4 Zm00001d017308_T017:4 Zm00001d017308_T028:2 Zm00001d017308_T022:4 Zm00001d017308_T051:3 Zm00001d017308_T042:4 Zm00001d017308_T024:4 Zm00001d017308_T007:4 Zm00001d017308_T015:4 Zm00001d017308_T020:4 Zm00001d017308_T019:4 Zm00001d017308_T031:4 Zm00001d017308_T026:4 Zm00001d017308_T014:4 Zm00001d017308_T035:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTTTCCCCTTCTCACCAACATCCATAATACGCTGTTGCAACTCCAGTCGTTGTTCAGTAGTCAT
GACTCTAAGTGAACACCATGAACGACGATGAGAAACcaagaattttttttctttaagaaaggaa
acagcagtaaaaatctcgctctctgaataaagctgcagtgttgctgctagtgaagcttgtacat
ttgatcct

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1260
Transcript exons: 192365776-192366117,192366195-192366663,192366775-192367
067,192368128-192368283
CAAGAATTTTTTTTCTTTAAGAAAGGAAACAGCAGTAAAAATCTCGCTCTCTGAATAAAGCTGC
AGTGTTGCTGCTAGTGAAGCTTGTACATTTGATCCTAAAGATGTGTTGAGGAAAACCAACTTCA
GAAGCTCCAAGGCATTTGCAACAGCCAATGATTTCCATATGCCTCTTTCAATAATCTTATTTCG
GTGATCCTTAATGATTTTTTCTTGAGGTTTGCAGAAGACTTCCATGTTTTCACTTTCTGCATTT
GAATGTCTGCATGATTTTTCAGGATCACAGAACCCGCTTTCTGAAACTGCACTCGTTTTGGTTT
CACCTAGTATAGCCTGATTATTTGGCAGTTCCTGTGAACATATTGTGTCCTTTGTGACATCATT
ATCATTGTTAATGTTTTTTTGATTAACAGGCCCAATTCTCTTGGCCTGATCTATTTTTTCTGTT
TGAATTAATTCAAGGACTTCATTAAGTGCACTCTTTATCTCTGGAACTTCAAAGTCATCCCAAT
TGAATTGCTCACAATCTGAATCTAAACTGTTTTCTTGACTTCTGTTTGAAATCTGGGGAAACAA
TCTTCTCCTTTTCAAACTCCTTTCCTTTTCAAGATATCTAACATACCGTTCCCCAAGAAGGTTA
CATAAACACATGACAGCTCCTCTTATCTTTCCGTTTGTTTTCAATAGTACTGCCATCCTTCTAA
GACATGTATGTGGTGGAGCTGGAAGATCAGAGAGAGACTTCCAAGGTACACGATAATATCTTGC
CCCAAGTACTGCACGCACTCTAATGTATGCCATCAGCAGTTTTCTATCAGATTCACATGTCCAA
AAGAATCTTTTACTTCTCATGCAGCTCTTTCTTAAGATAGCATACCGACTGATCATTGGTACTT
CTTCATCAACAATAGGTTGCTCCAATATTTGTTCAGCAGATCCACTTGCTTGTACTGTACGTTT
CAGAAGCTTCAGGCTGGTCCCATCGGCACGTCTCTTTCTTCTCACAGGAGTCAATCCAGAACCA
ACTCTTTGCTGCTTTTGTTTAGAAGTAAAGCTGGGCTGTTCATGGAGCCGAGATTGCCTTTCAT
ATGAAAGGCGAAGTACCTGCTCTACAGAAAGATTCAGTTCTCTTGCTATTCTAACACAGTCTTT
AAAAGGAATTTTCCCCTTCTCACCAACATCCATAATACGCTGTTGCAACTCCAGTCGTTGTTCA
GTAGTCATGACTCTAAGTGAACACCATGAACGACGATGAGAAAC
						
					

						Genomic sequence
						
							CAAGAATTTTTTTTCTTTAAGAAAGGAAACAGCAGTAAAAATCTCGCTCTCTGAATAAAGCTGC
AGTGTTGCTGCTAGTGAAGCTTGTACATTTGATCCTAAAGATGTGTTGAGGAAAACCAACTTCA
GAAGCTCCAAGGCATTTGCAACAGCCAATGATTTCCATATGCCTCTTTCAATAATCTTATTTCG
GTGATCCTTAATGATTTTTTCTTGAGGTTTGCAGAAGACTTCCATGTTTTCACTTTCTGCATTT
GAATGTCTGCATGATTTTTCAGGATCACAGAACCCGCTTTCTGAAACTGCACTCGTTTTGGTTT
CACCTAGTATAGCCTGATTATTCTAAAATGAAAAAAAACATTATTGACAAATATATGTCTGTGT
ATCGGCTGTTGATGTTAAATGTAGAAATTACTTACTGGCAGTTCCTGTGAACATATTGTGTCCT
TTGTGACATCATTATCATTGTTAATGTTTTTTTGATTAACAGGCCCAATTCTCTTGGCCTGATC
TATTTTTTCTGTTTGAATTAATTCAAGGACTTCATTAAGTGCACTCTTTATCTCTGGAACTTCA
AAGTCATCCCAATTGAATTGCTCACAATCTGAATCTAAACTGTTTTCTTGACTTCTGTTTGAAA
TCTGGGGAAACAATCTTCTCCTTTTCAAACTCCTTTCCTTTTCAAGATATCTAACATACCGTTC
CCCAAGAAGGTTACATAAACACATGACAGCTCCTCTTATCTTTCCGTTTGTTTTCAATAGTACT
GCCATCCTTCTAAGACATGTATGTGGTGGAGCTGGAAGATCAGAGAGAGACTTCCAAGGTACAC
GATAATATCTTGCCCCAAGTACTGCACGCACTCTAATGTATGCCATCAGCAGTTTTCTACAAAT
AATAATAAAATAGTCAGGACCATCGTGCATGATCGTCAACTAAAGTACTGAGGTTTAGAAATCA
ATTTTCAGACCAAGCATGGGCAGACAAAAATAATAATACCTATCAGATTCACATGTCCAAAAGA
ATCTTTTACTTCTCATGCAGCTCTTTCTTAAGATAGCATACCGACTGATCATTGGTACTTCTTC
ATCAACAATAGGTTGCTCCAATATTTGTTCAGCAGATCCACTTGCTTGTACTGTACGTTTCAGA
AGCTTCAGGCTGGTCCCATCGGCACGTCTCTTTCTTCTCACAGGAGTCAATCCAGAACCAACTC
TTTGCTGCTTTTGTTTAGAAGTAAAGCTGGGCTGTTCATGGAGCCGAGATTGCCTTTCATATGA
AAGGCGAAGTACCTATATGGAACCAATCCAGCTGATCAGCACACTAATGAAGAACTGTATACAG
AATAGACAATGAGAAATGCCAATCAGCACGAAAAGATAAATAAATGAAACAAACAAACAATAGT
AAGAAATATCCTGTCTCACAATGTGCACCACTGGACCTAACTCTAGCAGTGGCAAAGCTAGAGT
GAATCGGAGGGTGCACATCCTTTAAGGGTGCATAATAACAATTTGTAGTTGGTGCATATATGGT
GAAAATCTAGTCTAAATCACTAGTTTTGCAAATTTATATGGGTGCATTTGCACCCAGTGTTGTC
TACCTAGCTTTGCCCCTGAACTCTTGCCTGAGTGAGTGCTATGCAAGGTAGCTTTGAAGCAGCT
CGCACATTGTTACAGGATATTTTTGTACATGTGTCCGATTTGTGCCAGTGATGTTACATTCCAA
TCGATATTGCAATTGCCTTTATTTATTTGTTCTTCCCAGGTATCTATTATTCATATTATCTATA
GCACCGAGTTTTTATCCACTAATTAAACCAAGCACATATCGCTTTTGTTGCATATTGTTCACTC
AATCAGGGTAAACCAGAGGACTCACCATGTATCCCCTTGCCCTTATATTCCTTATTTGCCCCAT
CTGCCCCTACGCTGTAGAGTGTAGCAACAACTATTTCGCTAAGCATACCGTCTCTCTCCCTCTC
AACCTTTTGCAGCATGTGTTGTGTAAATATGTTAAGATAAGGTTCCCTTATCCATCAAAACCCC
ATGACAGAGAGTAGGGAAGTATCTAGAACTAGAAGGGGGAGATCACAGGATAACGACACGGTCA
AGCAAATAATGCAAAGTAGCACATTCTGTCTCACGTGCTTAAACGCAAAAAACTCAAAGATGGT
GACAAATGAACCATTTTGCATGTTAAAACAGTGCACTTCATGCTACTTATGTTCAAACCTGTGG
TAGCATAGAGTTAAAAATACAAGCTAAAGAAATACAGAAATGCAAAATGAGATTAAATTAATAT
AGTGCTTCAGATCAATAAATGATAACGAAGGAAAATCTAAACGCATACCTGCTCTACAGAAAGA
TTCAGTTCTCTTGCTATTCTAACACAGTCTTTAAAAGGAATTTTCCCCTTCTCACCAACATCCA
TAATACGCTGTTGCAACTCCAGTCGTTGTTCAGTAGTCATGACTCTAAGTGAACACCATGAACG
ACGATGAGAAAC
						
					

			
		

Sequences
Splice junction sequence	TTTTCCCCTTCTCACCAACATCCATAATACGCTGTTGCAACTCCAGTCGTTGTTCAGTAGTCAT GACTCTAAGTGAACACCATGAACGACGATGAGAAACcaagaattttttttctttaagaaaggaa acagcagtaaaaatctcgctctctgaataaagctgcagtgttgctgctagtgaagcttgtacat ttgatcct
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1260 Transcript exons: 192365776-192366117,192366195-192366663,192366775-192367 067,192368128-192368283 CAAGAATTTTTTTTCTTTAAGAAAGGAAACAGCAGTAAAAATCTCGCTCTCTGAATAAAGCTGC AGTGTTGCTGCTAGTGAAGCTTGTACATTTGATCCTAAAGATGTGTTGAGGAAAACCAACTTCA GAAGCTCCAAGGCATTTGCAACAGCCAATGATTTCCATATGCCTCTTTCAATAATCTTATTTCG GTGATCCTTAATGATTTTTTCTTGAGGTTTGCAGAAGACTTCCATGTTTTCACTTTCTGCATTT GAATGTCTGCATGATTTTTCAGGATCACAGAACCCGCTTTCTGAAACTGCACTCGTTTTGGTTT CACCTAGTATAGCCTGATTATTTGGCAGTTCCTGTGAACATATTGTGTCCTTTGTGACATCATT ATCATTGTTAATGTTTTTTTGATTAACAGGCCCAATTCTCTTGGCCTGATCTATTTTTTCTGTT TGAATTAATTCAAGGACTTCATTAAGTGCACTCTTTATCTCTGGAACTTCAAAGTCATCCCAAT TGAATTGCTCACAATCTGAATCTAAACTGTTTTCTTGACTTCTGTTTGAAATCTGGGGAAACAA TCTTCTCCTTTTCAAACTCCTTTCCTTTTCAAGATATCTAACATACCGTTCCCCAAGAAGGTTA CATAAACACATGACAGCTCCTCTTATCTTTCCGTTTGTTTTCAATAGTACTGCCATCCTTCTAA GACATGTATGTGGTGGAGCTGGAAGATCAGAGAGAGACTTCCAAGGTACACGATAATATCTTGC CCCAAGTACTGCACGCACTCTAATGTATGCCATCAGCAGTTTTCTATCAGATTCACATGTCCAA AAGAATCTTTTACTTCTCATGCAGCTCTTTCTTAAGATAGCATACCGACTGATCATTGGTACTT CTTCATCAACAATAGGTTGCTCCAATATTTGTTCAGCAGATCCACTTGCTTGTACTGTACGTTT CAGAAGCTTCAGGCTGGTCCCATCGGCACGTCTCTTTCTTCTCACAGGAGTCAATCCAGAACCA ACTCTTTGCTGCTTTTGTTTAGAAGTAAAGCTGGGCTGTTCATGGAGCCGAGATTGCCTTTCAT ATGAAAGGCGAAGTACCTGCTCTACAGAAAGATTCAGTTCTCTTGCTATTCTAACACAGTCTTT AAAAGGAATTTTCCCCTTCTCACCAACATCCATAATACGCTGTTGCAACTCCAGTCGTTGTTCA GTAGTCATGACTCTAAGTGAACACCATGAACGACGATGAGAAAC
Genomic sequence	CAAGAATTTTTTTTCTTTAAGAAAGGAAACAGCAGTAAAAATCTCGCTCTCTGAATAAAGCTGC AGTGTTGCTGCTAGTGAAGCTTGTACATTTGATCCTAAAGATGTGTTGAGGAAAACCAACTTCA GAAGCTCCAAGGCATTTGCAACAGCCAATGATTTCCATATGCCTCTTTCAATAATCTTATTTCG GTGATCCTTAATGATTTTTTCTTGAGGTTTGCAGAAGACTTCCATGTTTTCACTTTCTGCATTT GAATGTCTGCATGATTTTTCAGGATCACAGAACCCGCTTTCTGAAACTGCACTCGTTTTGGTTT CACCTAGTATAGCCTGATTATTCTAAAATGAAAAAAAACATTATTGACAAATATATGTCTGTGT ATCGGCTGTTGATGTTAAATGTAGAAATTACTTACTGGCAGTTCCTGTGAACATATTGTGTCCT TTGTGACATCATTATCATTGTTAATGTTTTTTTGATTAACAGGCCCAATTCTCTTGGCCTGATC TATTTTTTCTGTTTGAATTAATTCAAGGACTTCATTAAGTGCACTCTTTATCTCTGGAACTTCA AAGTCATCCCAATTGAATTGCTCACAATCTGAATCTAAACTGTTTTCTTGACTTCTGTTTGAAA TCTGGGGAAACAATCTTCTCCTTTTCAAACTCCTTTCCTTTTCAAGATATCTAACATACCGTTC CCCAAGAAGGTTACATAAACACATGACAGCTCCTCTTATCTTTCCGTTTGTTTTCAATAGTACT GCCATCCTTCTAAGACATGTATGTGGTGGAGCTGGAAGATCAGAGAGAGACTTCCAAGGTACAC GATAATATCTTGCCCCAAGTACTGCACGCACTCTAATGTATGCCATCAGCAGTTTTCTACAAAT AATAATAAAATAGTCAGGACCATCGTGCATGATCGTCAACTAAAGTACTGAGGTTTAGAAATCA ATTTTCAGACCAAGCATGGGCAGACAAAAATAATAATACCTATCAGATTCACATGTCCAAAAGA ATCTTTTACTTCTCATGCAGCTCTTTCTTAAGATAGCATACCGACTGATCATTGGTACTTCTTC ATCAACAATAGGTTGCTCCAATATTTGTTCAGCAGATCCACTTGCTTGTACTGTACGTTTCAGA AGCTTCAGGCTGGTCCCATCGGCACGTCTCTTTCTTCTCACAGGAGTCAATCCAGAACCAACTC TTTGCTGCTTTTGTTTAGAAGTAAAGCTGGGCTGTTCATGGAGCCGAGATTGCCTTTCATATGA AAGGCGAAGTACCTATATGGAACCAATCCAGCTGATCAGCACACTAATGAAGAACTGTATACAG AATAGACAATGAGAAATGCCAATCAGCACGAAAAGATAAATAAATGAAACAAACAAACAATAGT AAGAAATATCCTGTCTCACAATGTGCACCACTGGACCTAACTCTAGCAGTGGCAAAGCTAGAGT GAATCGGAGGGTGCACATCCTTTAAGGGTGCATAATAACAATTTGTAGTTGGTGCATATATGGT GAAAATCTAGTCTAAATCACTAGTTTTGCAAATTTATATGGGTGCATTTGCACCCAGTGTTGTC TACCTAGCTTTGCCCCTGAACTCTTGCCTGAGTGAGTGCTATGCAAGGTAGCTTTGAAGCAGCT CGCACATTGTTACAGGATATTTTTGTACATGTGTCCGATTTGTGCCAGTGATGTTACATTCCAA TCGATATTGCAATTGCCTTTATTTATTTGTTCTTCCCAGGTATCTATTATTCATATTATCTATA GCACCGAGTTTTTATCCACTAATTAAACCAAGCACATATCGCTTTTGTTGCATATTGTTCACTC AATCAGGGTAAACCAGAGGACTCACCATGTATCCCCTTGCCCTTATATTCCTTATTTGCCCCAT CTGCCCCTACGCTGTAGAGTGTAGCAACAACTATTTCGCTAAGCATACCGTCTCTCTCCCTCTC AACCTTTTGCAGCATGTGTTGTGTAAATATGTTAAGATAAGGTTCCCTTATCCATCAAAACCCC ATGACAGAGAGTAGGGAAGTATCTAGAACTAGAAGGGGGAGATCACAGGATAACGACACGGTCA AGCAAATAATGCAAAGTAGCACATTCTGTCTCACGTGCTTAAACGCAAAAAACTCAAAGATGGT GACAAATGAACCATTTTGCATGTTAAAACAGTGCACTTCATGCTACTTATGTTCAAACCTGTGG TAGCATAGAGTTAAAAATACAAGCTAAAGAAATACAGAAATGCAAAATGAGATTAAATTAATAT AGTGCTTCAGATCAATAAATGATAACGAAGGAAAATCTAAACGCATACCTGCTCTACAGAAAGA TTCAGTTCTCTTGCTATTCTAACACAGTCTTTAAAAGGAATTTTCCCCTTCTCACCAACATCCA TAATACGCTGTTGCAACTCCAGTCGTTGTTCAGTAGTCATGACTCTAAGTGAACACCATGAACG ACGATGAGAAAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.075782706

Conservation Information
Conserved circRNAs	NA
PMCS	0.075782706

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							192368276-192365826(+)
192368249-192365778(-)
						
					

						Potential amino acid sequence
						
							MRNQEFFFFKKGNSSKNLAL*(+)
MTTEQRLELQQRIMDVGEKGKIPFKDCVRIARELNLSVEQVLRLSYERQSRLHEQPSFTSKQKQ
QRVGSGLTPVRRKRRADGTSLKLLKRTVQASGSAEQILEQPIVDEEVPMISRYAILRKSCMRSK
RFFWTCESDRKLLMAYIRVRAVLGARYYRVPWKSLSDLPAPPHTCLRRMAVLLKTNGKIRGAVM
CLCNLLGERYVRYLEKERSLKRRRLFPQISNRSQENSLDSDCEQFNWDDFEVPEIKSALNEVLE
LIQTEKIDQAKRIGPVNQKNINNDNDVTKDTICSQELPNNQAILGETKTSAVSESGFCDPEKSC
RHSNAESENMEVFCKPQEKIIKDHRNKIIERGIWKSLAVANALELLKLVFLNTSLGSNVQASLA
ATLQLYSESEIFTAVSFLKEKKFLVSHRRSWCSLRVMTTEQRLELQQRIMDVGEKGKIPFKDCV
RIARELNLSVEQVLRLSYERQSRLHEQPSFTSKQKQQRVGSGLTPVRRKRRADGTSLKLLKRTV
QASGSAEQILEQPIVDEEVPMISRYAILRKSCMRSKRFFWTCESDRKLLMAYIRVRAVLGARYY
RVPWKSLSDLPAPPHTCLRRMAVLLKTNGKIRGAVMCLCNLLGERYVRYLEKERSLKRRRLFPQ
ISNRSQENSLDSDCEQFNWDDFEVPEIKSALNEVLELIQTEKIDQAKRIGPVNQKNINNDNDVT
KDTICSQELPNNQAILGETKTSAVSESGFCDPEKSCRHSNAESENMEVFCKPQEKIIKDHRNKI
IERGIWKSLAVANALELLKLVFLNTSLGSNVQASLAATLQLYSESEIFTAVSFLKEKKFLVSHR
RSWCSLRVMTTEQRLELQQRIMDVGEKGKIPFKDCVRIARELNLSVEQVLRLSYERQSRLHEQP
SFTSKQKQQRVGSGLTPVRRKRRADGTSLKLLKRTVQASGSAEQILEQPIVDEEVPMISRYAIL
RKSCMRSKRFFWTCESDRKLLMAYIRVRAVLGARYYRVPWKSLSDLPAPPHTCLRRMAVLLKTN
GKIRGAVMCLCNLLGERYVRYLEKERSLKRRRLFPQISNRSQENSLDSDCEQFNWDDFEVPEIK
SALNEVLELIQTEKIDQAKRIGPVNQKNINNDNDVTKDTICSQELPNNQAILGETKTSAVSESG
FCDPEKSCRHSNAESENMEVFCKPQEKIIKDHRNKIIERGIWKSLAVANALELLKLVFLNTSLG
SNVQASLAATLQLYSESEIFTAVSFLKEKKFLVSHRRSWCSLRVMTTEQRLELQQRIMDVGEKG
KIPFKDCVRIARELNLSVEQVLRLSYERQSRLHEQPSFTSKQKQQRVGSGLTPVRRKRRADGTS
LKLLKRTVQASGSAEQILEQPIVDEEVPMISRYAILRKSCMRSKRFFWTCESDRKLLMAYIRVR
AVLGARYYRVPWKSLSDLPAPPHTCLRRMAVLLKTNGKIRGAVMCLCNLLGERYVRYLEKERSL
KRRRLFPQISNRSQENSLDSDCEQFNWDDFEVPEIKSALNEVLELIQTEKIDQAKRIGPVNQKN
INNDNDVTKDTICSQELPNNQAILGETKTSAVSESGFCDPEKSCRHSNAESENMEVFCKPQEKI
IKDHRNKIIERGIWKSLAVANALELLKLVFLNTSLGSNVQASLAATLQLYSESEIFTAVSFLKE
KKFL(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	192368276-192365826(+) 192368249-192365778(-)
Potential amino acid sequence	MRNQEFFFFKKGNSSKNLAL*(+) MTTEQRLELQQRIMDVGEKGKIPFKDCVRIARELNLSVEQVLRLSYERQSRLHEQPSFTSKQKQ QRVGSGLTPVRRKRRADGTSLKLLKRTVQASGSAEQILEQPIVDEEVPMISRYAILRKSCMRSK RFFWTCESDRKLLMAYIRVRAVLGARYYRVPWKSLSDLPAPPHTCLRRMAVLLKTNGKIRGAVM CLCNLLGERYVRYLEKERSLKRRRLFPQISNRSQENSLDSDCEQFNWDDFEVPEIKSALNEVLE LIQTEKIDQAKRIGPVNQKNINNDNDVTKDTICSQELPNNQAILGETKTSAVSESGFCDPEKSC RHSNAESENMEVFCKPQEKIIKDHRNKIIERGIWKSLAVANALELLKLVFLNTSLGSNVQASLA ATLQLYSESEIFTAVSFLKEKKFLVSHRRSWCSLRVMTTEQRLELQQRIMDVGEKGKIPFKDCV RIARELNLSVEQVLRLSYERQSRLHEQPSFTSKQKQQRVGSGLTPVRRKRRADGTSLKLLKRTV QASGSAEQILEQPIVDEEVPMISRYAILRKSCMRSKRFFWTCESDRKLLMAYIRVRAVLGARYY RVPWKSLSDLPAPPHTCLRRMAVLLKTNGKIRGAVMCLCNLLGERYVRYLEKERSLKRRRLFPQ ISNRSQENSLDSDCEQFNWDDFEVPEIKSALNEVLELIQTEKIDQAKRIGPVNQKNINNDNDVT KDTICSQELPNNQAILGETKTSAVSESGFCDPEKSCRHSNAESENMEVFCKPQEKIIKDHRNKI IERGIWKSLAVANALELLKLVFLNTSLGSNVQASLAATLQLYSESEIFTAVSFLKEKKFLVSHR RSWCSLRVMTTEQRLELQQRIMDVGEKGKIPFKDCVRIARELNLSVEQVLRLSYERQSRLHEQP SFTSKQKQQRVGSGLTPVRRKRRADGTSLKLLKRTVQASGSAEQILEQPIVDEEVPMISRYAIL RKSCMRSKRFFWTCESDRKLLMAYIRVRAVLGARYYRVPWKSLSDLPAPPHTCLRRMAVLLKTN GKIRGAVMCLCNLLGERYVRYLEKERSLKRRRLFPQISNRSQENSLDSDCEQFNWDDFEVPEIK SALNEVLELIQTEKIDQAKRIGPVNQKNINNDNDVTKDTICSQELPNNQAILGETKTSAVSESG FCDPEKSCRHSNAESENMEVFCKPQEKIIKDHRNKIIERGIWKSLAVANALELLKLVFLNTSLG SNVQASLAATLQLYSESEIFTAVSFLKEKKFLVSHRRSWCSLRVMTTEQRLELQQRIMDVGEKG KIPFKDCVRIARELNLSVEQVLRLSYERQSRLHEQPSFTSKQKQQRVGSGLTPVRRKRRADGTS LKLLKRTVQASGSAEQILEQPIVDEEVPMISRYAILRKSCMRSKRFFWTCESDRKLLMAYIRVR AVLGARYYRVPWKSLSDLPAPPHTCLRRMAVLLKTNGKIRGAVMCLCNLLGERYVRYLEKERSL KRRRLFPQISNRSQENSLDSDCEQFNWDDFEVPEIKSALNEVLELIQTEKIDQAKRIGPVNQKN INNDNDVTKDTICSQELPNNQAILGETKTSAVSESGFCDPEKSCRHSNAESENMEVFCKPQEKI IKDHRNKIIERGIWKSLAVANALELLKLVFLNTSLGSNVQASLAATLQLYSESEIFTAVSFLKE KKFL(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d017308_circ_g.2

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