Plant Circular RNA Database

Detail information of Os08g0492400_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os08g0492400_circ_g.1
					
						ID in PlantcircBase
						osa_circ_037471
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr8: 24327362-24329243  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os08g0492400						
					
						Parent gene annotation
						
							C2 calcium-dependent membrane targeting domain containing protei
n. (Os08t0492400-01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os08g0492400_circ_g.2 Os08g0492400_circ_g.3 Os08g0492400_circ_g.4 Os08g0492400_circ_g.5 Os08g0492400_circ_g.6 Os08g0492400_circ_g.7 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os08t0492400-01:2

General Information
CircRNA Name	Os08g0492400_circ_g.1
ID in PlantcircBase	osa_circ_037471
Alias	NA
Organism	Oryza sativa
Position	chr8: 24327362-24329243 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os08g0492400
Parent gene annotation	C2 calcium-dependent membrane targeting domain containing protei n. (Os08t0492400-01)
Parent gene strand	+
Alternative splicing	Os08g0492400_circ_g.2 Os08g0492400_circ_g.3 Os08g0492400_circ_g.4 Os08g0492400_circ_g.5 Os08g0492400_circ_g.6 Os08g0492400_circ_g.7
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os08t0492400-01:2

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GATGCTACTGGTTTTTCTGATCCTTATGTGGTATTTACTTGCAACGGTAAAAGTAAAACAAGCT
CAATCAAGTTCCAAACACTGGAACCTCAGTGGAATGgagaaatttgtgtcgcgatgtctttgga
aacagctggtgccacacgctcatggtccgatgatcttgttagtgaactaactgacatacagaaa
gattattc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1560
Transcript exons: 24327362-24328738,24329061-24329243
GAGAAATTTGTGTCGCGATGTCTTTGGAAACAGCTGGTGCCACACGCTCATGGTCCGATGATCT
TGTTAGTGAACTAACTGACATACAGAAAGATTATTCTCTATCAAGTCAGGGCACAGGAACATCC
GTTGCATTATCTTATCAAGAAAGTGAAGCTTGTCAAGAAGAAAGTGTCAATGGGAATTTGGGCA
GAGCTGGTTTCACTGAAGAGGACAACTGTAGTCAAGATACTGACAGAAATCAAACTACTGCAGA
GGACAAATCTAATGGGATTCCTGCTGCAGCTTCCACTGGGATTGAAGTTTCTAAAACGGATAAG
TCCAATAAGCCATCGTTTGTTGATCGTGTCTGTCAAATGTTTGTCAGGAAAAGCGATGATGTGG
TAACTACCCCCTTGGTAACAACTGACAAATCAGAAGATGTTCAAGAAGCAACAACAGGATATGA
AGCTCCTGCAACTGGAAGCCAAACTTATAGTGCATCTACAGACACTCCTTTTGATGAACTATTG
AAGTACTTTGAATCAAAACATCAAGAAGTTGAAATGCCTGTAGATTTACAAGGAATTCTTGTTG
ACAAGTCGTACATTACATCGCCTAGTGATCTGAACAATTTTCTCTTCTCGCCAGATTCAAATTT
TCGACAAACAGTGGTTGAACTCCAAGGTTGTTCTGATGTCAAAATGGAATCCTGGAAAATTGAT
AGTGATGGGGAGTCCTTGAAGAGAGTGATAACTTATACAACTGCACCATCCAAATTGGTTAAAG
CTGTTAAAGCAACAGAAGAACAGTCTTATTTGAAAGCTGATGGAAATGGATATTCAGTTTTATT
GAGTGTTAGCACCCCTGATGTTCCTTGTGGTACTTATTTTCGGACAGAAATTCTTTTCCGTATT
TTGCCAGGTCCTGAACTTGATTCTGAGCAACTGACGTCACATTTGGTAATTTCATGGCGCATAA
ATTTTCTTCAGAGTACTATGATGAAAGGTATGATAGAAAATGGAGCAAAACAAGGGTTGCAACA
AAATTATGCACAGTTTTCTGATTTGCTGTCACAGAAGATCAAGCCTATTGATGTAGATGCTGGG
TCTGACAAGGGACAAGTCTTAGCGTCATTGCAGAGGGGGCAGGAGTCTGATTGGAATATAGCAT
TTCTGTACTTCTGCAACTTTGGTGTTTTATGCTCTCTTTTTGTAACCATATACATTGCTGTGCA
TGTTCAACTAAGGAGTTCAGGTGCACATAAGGGGCTCGAGTTTCCTGGATTAGATCTGCCAGAT
TCTCTCAGTGAAATTGTCATGGGTGGGCTTTTGTTTCTTCAATTACGACACATCTATAAAAAAA
TCTCATGCTTTATTCAGGCAAGAGAGCAAAAAGTTGGTGATCATGGTGTCAAGGCACAAGGTGA
TGGATGGTTGTTAACAGTTGCCTTAATTGAGGGAACCAAACTGGCTCCAGTTGATGCTACTGGT
TTTTCTGATCCTTATGTGGTATTTACTTGCAACGGTAAAAGTAAAACAAGCTCAATCAAGTTCC
AAACACTGGAACCTCAGTGGAATG
						
					

						Genomic sequence
						
							GAGAAATTTGTGTCGCGATGTCTTTGGAAACAGCTGGTGCCACACGCTCATGGTCCGATGATCT
TGTTAGTGAACTAACTGACATACAGAAAGATTATTCTCTATCAAGTCAGGGCACAGGAACATCC
GTTGCATTATCTTATCAAGAAAGTGAAGCTTGTCAAGAAGAAAGTGTCAATGGGAATTTGGGCA
GAGCTGGTTTCACTGAAGAGGACAACTGTAGTCAAGATACTGACAGAAATCAAACTACTGCAGA
GGACAAATCTAATGGGATTCCTGCTGCAGCTTCCACTGGGATTGAAGTTTCTAAAACGGATAAG
TCCAATAAGCCATCGTTTGTTGATCGTGTCTGTCAAATGTTTGTCAGGAAAAGCGATGATGTGG
TAACTACCCCCTTGGTAACAACTGACAAATCAGAAGATGTTCAAGAAGCAACAACAGGATATGA
AGCTCCTGCAACTGGAAGCCAAACTTATAGTGCATCTACAGACACTCCTTTTGATGAACTATTG
AAGTACTTTGAATCAAAACATCAAGAAGTTGAAATGCCTGTAGATTTACAAGGAATTCTTGTTG
ACAAGTCGTACATTACATCGCCTAGTGATCTGAACAATTTTCTCTTCTCGCCAGATTCAAATTT
TCGACAAACAGTGGTTGAACTCCAAGGTTGTTCTGATGTCAAAATGGAATCCTGGAAAATTGAT
AGTGATGGGGAGTCCTTGAAGAGAGTGATAACTTATACAACTGCACCATCCAAATTGGTTAAAG
CTGTTAAAGCAACAGAAGAACAGTCTTATTTGAAAGCTGATGGAAATGGATATTCAGTTTTATT
GAGTGTTAGCACCCCTGATGTTCCTTGTGGTACTTATTTTCGGACAGAAATTCTTTTCCGTATT
TTGCCAGGTCCTGAACTTGATTCTGAGCAACTGACGTCACATTTGGTAATTTCATGGCGCATAA
ATTTTCTTCAGAGTACTATGATGAAAGGTATGATAGAAAATGGAGCAAAACAAGGGTTGCAACA
AAATTATGCACAGTTTTCTGATTTGCTGTCACAGAAGATCAAGCCTATTGATGTAGATGCTGGG
TCTGACAAGGGACAAGTCTTAGCGTCATTGCAGAGGGGGCAGGAGTCTGATTGGAATATAGCAT
TTCTGTACTTCTGCAACTTTGGTGTTTTATGCTCTCTTTTTGTAACCATATACATTGCTGTGCA
TGTTCAACTAAGGAGTTCAGGTGCACATAAGGGGCTCGAGTTTCCTGGATTAGATCTGCCAGAT
TCTCTCAGTGAAATTGTCATGGGTGGGCTTTTGTTTCTTCAATTACGACACATCTATAAAAAAA
TCTCATGCTTTATTCAGGCAAGAGAGCAAAAAGGTGCATTTTCCCTCTCATTCAGTTTCGTCAT
ATTTCATCTCTAAAGTGTTGTAACTAAAAAAATCTCTCTGGAAATGCAAGAATTCATGATTAAA
GCTCATGCTTATATTTTCAAACAATAATTTCAGATGCAGTTGATGTTTAGCACTAAATTTGTAA
AGAAAAAATATTAATTAACTCCACTTCCCTGGCATCGACACATGGTGCTTTTATGTATTTTATT
TTCTTCAGAAACATATGAACAAGTACCACAATAATGTGATTTGCATTTCTTGATGTAGTGCTTT
TCATTGTTGAATCTTACACTCACAAATGTGTGCAGTTGGTGATCATGGTGTCAAGGCACAAGGT
GATGGATGGTTGTTAACAGTTGCCTTAATTGAGGGAACCAAACTGGCTCCAGTTGATGCTACTG
GTTTTTCTGATCCTTATGTGGTATTTACTTGCAACGGTAAAAGTAAAACAAGCTCAATCAAGTT
CCAAACACTGGAACCTCAGTGGAATG
						
					

			
		

Sequences
Splice junction sequence	GATGCTACTGGTTTTTCTGATCCTTATGTGGTATTTACTTGCAACGGTAAAAGTAAAACAAGCT CAATCAAGTTCCAAACACTGGAACCTCAGTGGAATGgagaaatttgtgtcgcgatgtctttgga aacagctggtgccacacgctcatggtccgatgatcttgttagtgaactaactgacatacagaaa gattattc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1560 Transcript exons: 24327362-24328738,24329061-24329243 GAGAAATTTGTGTCGCGATGTCTTTGGAAACAGCTGGTGCCACACGCTCATGGTCCGATGATCT TGTTAGTGAACTAACTGACATACAGAAAGATTATTCTCTATCAAGTCAGGGCACAGGAACATCC GTTGCATTATCTTATCAAGAAAGTGAAGCTTGTCAAGAAGAAAGTGTCAATGGGAATTTGGGCA GAGCTGGTTTCACTGAAGAGGACAACTGTAGTCAAGATACTGACAGAAATCAAACTACTGCAGA GGACAAATCTAATGGGATTCCTGCTGCAGCTTCCACTGGGATTGAAGTTTCTAAAACGGATAAG TCCAATAAGCCATCGTTTGTTGATCGTGTCTGTCAAATGTTTGTCAGGAAAAGCGATGATGTGG TAACTACCCCCTTGGTAACAACTGACAAATCAGAAGATGTTCAAGAAGCAACAACAGGATATGA AGCTCCTGCAACTGGAAGCCAAACTTATAGTGCATCTACAGACACTCCTTTTGATGAACTATTG AAGTACTTTGAATCAAAACATCAAGAAGTTGAAATGCCTGTAGATTTACAAGGAATTCTTGTTG ACAAGTCGTACATTACATCGCCTAGTGATCTGAACAATTTTCTCTTCTCGCCAGATTCAAATTT TCGACAAACAGTGGTTGAACTCCAAGGTTGTTCTGATGTCAAAATGGAATCCTGGAAAATTGAT AGTGATGGGGAGTCCTTGAAGAGAGTGATAACTTATACAACTGCACCATCCAAATTGGTTAAAG CTGTTAAAGCAACAGAAGAACAGTCTTATTTGAAAGCTGATGGAAATGGATATTCAGTTTTATT GAGTGTTAGCACCCCTGATGTTCCTTGTGGTACTTATTTTCGGACAGAAATTCTTTTCCGTATT TTGCCAGGTCCTGAACTTGATTCTGAGCAACTGACGTCACATTTGGTAATTTCATGGCGCATAA ATTTTCTTCAGAGTACTATGATGAAAGGTATGATAGAAAATGGAGCAAAACAAGGGTTGCAACA AAATTATGCACAGTTTTCTGATTTGCTGTCACAGAAGATCAAGCCTATTGATGTAGATGCTGGG TCTGACAAGGGACAAGTCTTAGCGTCATTGCAGAGGGGGCAGGAGTCTGATTGGAATATAGCAT TTCTGTACTTCTGCAACTTTGGTGTTTTATGCTCTCTTTTTGTAACCATATACATTGCTGTGCA TGTTCAACTAAGGAGTTCAGGTGCACATAAGGGGCTCGAGTTTCCTGGATTAGATCTGCCAGAT TCTCTCAGTGAAATTGTCATGGGTGGGCTTTTGTTTCTTCAATTACGACACATCTATAAAAAAA TCTCATGCTTTATTCAGGCAAGAGAGCAAAAAGTTGGTGATCATGGTGTCAAGGCACAAGGTGA TGGATGGTTGTTAACAGTTGCCTTAATTGAGGGAACCAAACTGGCTCCAGTTGATGCTACTGGT TTTTCTGATCCTTATGTGGTATTTACTTGCAACGGTAAAAGTAAAACAAGCTCAATCAAGTTCC AAACACTGGAACCTCAGTGGAATG
Genomic sequence	GAGAAATTTGTGTCGCGATGTCTTTGGAAACAGCTGGTGCCACACGCTCATGGTCCGATGATCT TGTTAGTGAACTAACTGACATACAGAAAGATTATTCTCTATCAAGTCAGGGCACAGGAACATCC GTTGCATTATCTTATCAAGAAAGTGAAGCTTGTCAAGAAGAAAGTGTCAATGGGAATTTGGGCA GAGCTGGTTTCACTGAAGAGGACAACTGTAGTCAAGATACTGACAGAAATCAAACTACTGCAGA GGACAAATCTAATGGGATTCCTGCTGCAGCTTCCACTGGGATTGAAGTTTCTAAAACGGATAAG TCCAATAAGCCATCGTTTGTTGATCGTGTCTGTCAAATGTTTGTCAGGAAAAGCGATGATGTGG TAACTACCCCCTTGGTAACAACTGACAAATCAGAAGATGTTCAAGAAGCAACAACAGGATATGA AGCTCCTGCAACTGGAAGCCAAACTTATAGTGCATCTACAGACACTCCTTTTGATGAACTATTG AAGTACTTTGAATCAAAACATCAAGAAGTTGAAATGCCTGTAGATTTACAAGGAATTCTTGTTG ACAAGTCGTACATTACATCGCCTAGTGATCTGAACAATTTTCTCTTCTCGCCAGATTCAAATTT TCGACAAACAGTGGTTGAACTCCAAGGTTGTTCTGATGTCAAAATGGAATCCTGGAAAATTGAT AGTGATGGGGAGTCCTTGAAGAGAGTGATAACTTATACAACTGCACCATCCAAATTGGTTAAAG CTGTTAAAGCAACAGAAGAACAGTCTTATTTGAAAGCTGATGGAAATGGATATTCAGTTTTATT GAGTGTTAGCACCCCTGATGTTCCTTGTGGTACTTATTTTCGGACAGAAATTCTTTTCCGTATT TTGCCAGGTCCTGAACTTGATTCTGAGCAACTGACGTCACATTTGGTAATTTCATGGCGCATAA ATTTTCTTCAGAGTACTATGATGAAAGGTATGATAGAAAATGGAGCAAAACAAGGGTTGCAACA AAATTATGCACAGTTTTCTGATTTGCTGTCACAGAAGATCAAGCCTATTGATGTAGATGCTGGG TCTGACAAGGGACAAGTCTTAGCGTCATTGCAGAGGGGGCAGGAGTCTGATTGGAATATAGCAT TTCTGTACTTCTGCAACTTTGGTGTTTTATGCTCTCTTTTTGTAACCATATACATTGCTGTGCA TGTTCAACTAAGGAGTTCAGGTGCACATAAGGGGCTCGAGTTTCCTGGATTAGATCTGCCAGAT TCTCTCAGTGAAATTGTCATGGGTGGGCTTTTGTTTCTTCAATTACGACACATCTATAAAAAAA TCTCATGCTTTATTCAGGCAAGAGAGCAAAAAGGTGCATTTTCCCTCTCATTCAGTTTCGTCAT ATTTCATCTCTAAAGTGTTGTAACTAAAAAAATCTCTCTGGAAATGCAAGAATTCATGATTAAA GCTCATGCTTATATTTTCAAACAATAATTTCAGATGCAGTTGATGTTTAGCACTAAATTTGTAA AGAAAAAATATTAATTAACTCCACTTCCCTGGCATCGACACATGGTGCTTTTATGTATTTTATT TTCTTCAGAAACATATGAACAAGTACCACAATAATGTGATTTGCATTTCTTGATGTAGTGCTTT TCATTGTTGAATCTTACACTCACAAATGTGTGCAGTTGGTGATCATGGTGTCAAGGCACAAGGT GATGGATGGTTGTTAACAGTTGCCTTAATTGAGGGAACCAAACTGGCTCCAGTTGATGCTACTG GTTTTTCTGATCCTTATGTGGTATTTACTTGCAACGGTAAAAGTAAAACAAGCTCAATCAAGTT CCAAACACTGGAACCTCAGTGGAATG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.197004432

Conservation Information
Conserved circRNAs	NA
PMCS	0.197004432

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							24329146-24327436(+)
24327380-24329240(+)
24327414-24329213(-)
24327448-24329235(-)
						
					

						Potential amino acid sequence
						
							MLLVFLILMWYLLATVKVKQAQSSSKHWNLSGMEKFVSRCLWKQLVPHAHGPMILLVN*(+)
MSLETAGATRSWSDDLVSELTDIQKDYSLSSQGTGTSVALSYQESEACQEESVNGNLGRAGFTE
EDNCSQDTDRNQTTAEDKSNGIPAAASTGIEVSKTDKSNKPSFVDRVCQMFVRKSDDVVTTPLV
TTDKSEDVQEATTGYEAPATGSQTYSASTDTPFDELLKYFESKHQEVEMPVDLQGILVDKSYIT
SPSDLNNFLFSPDSNFRQTVVELQGCSDVKMESWKIDSDGESLKRVITYTTAPSKLVKAVKATE
EQSYLKADGNGYSVLLSVSTPDVPCGTYFRTEILFRILPGPELDSEQLTSHLVISWRINFLQST
MMKGMIENGAKQGLQQNYAQFSDLLSQKIKPIDVDAGSDKGQVLASLQRGQESDWNIAFLYFCN
FGVLCSLFVTIYIAVHVQLRSSGAHKGLEFPGLDLPDSLSEIVMGGLLFLQLRHIYKKISCFIQ
AREQKVGDHGVKAQGDGWLLTVALIEGTKLAPVDATGFSDPYVVFTCNGKSKTSSIKFQTLEPQ
WNGEICVAMSLETAGATRSWSDDLVSELTDIQKDYSLSSQGTGTSVALSYQESEACQEESVNGN
LGRAGFTEEDNCSQDTDRNQTTAEDKSNGIPAAASTGIEVSKTDKSNKPSFVDRVCQMFVRKSD
DVVTTPLVTTDKSEDVQEATTGYEAPATGSQTYSASTDTPFDELLKYFESKHQEVEMPVDLQGI
LVDKSYITSPSDLNNFLFSPDSNFRQTVVELQGCSDVKMESWKIDSDGESLKRVITYTTAPSKL
VKAVKATEEQSYLKADGNGYSVLLSVSTPDVPCGTYFRTEILFRILPGPELDSEQLTSHLVISW
RINFLQSTMMKGMIENGAKQGLQQNYAQFSDLLSQKIKPIDVDAGSDKGQVLASLQRGQESDWN
IAFLYFCNFGVLCSLFVTIYIAVHVQLRSSGAHKGLEFPGLDLPDSLSEIVMGGLLFLQLRHIY
KKISCFIQAREQKVGDHGVKAQGDGWLLTVALIEGTKLAPVDATGFSDPYVVFTCNGKSKTSSI
KFQTLEPQWNGEICVAMSLETAGATRSWSDDLVSELTDIQKDYSLSSQGTGTSVALSYQESEAC
QEESVNGNLGRAGFTEEDNCSQDTDRNQTTAEDKSNGIPAAASTGIEVSKTDKSNKPSFVDRVC
QMFVRKSDDVVTTPLVTTDKSEDVQEATTGYEAPATGSQTYSASTDTPFDELLKYFESKHQEVE
MPVDLQGILVDKSYITSPSDLNNFLFSPDSNFRQTVVELQGCSDVKMESWKIDSDGESLKRVIT
YTTAPSKLVKAVKATEEQSYLKADGNGYSVLLSVSTPDVPCGTYFRTEILFRILPGPELDSEQL
TSHLVISWRINFLQSTMMKGMIENGAKQGLQQNYAQFSDLLSQKIKPIDVDAGSDKGQVLASLQ
RGQESDWNIAFLYFCNFGVLCSLFVTIYIAVHVQLRSSGAHKGLEFPGLDLPDSLSEIVMGGLL
FLQLRHIYKKISCFIQAREQKVGDHGVKAQGDGWLLTVALIEGTKLAPVDATGFSDPYVVFTCN
GKSKTSSIKFQTLEPQWNGEICVAMSLETAGATRSWSDDLVSELTDIQKDYSLSSQGTGTSVAL
SYQESEACQEESVNGNLGRAGFTEEDNCSQDTDRNQTTAEDKSNGIPAAASTGIEVSKTDKSNK
PSFVDRVCQMFVRKSDDVVTTPLVTTDKSEDVQEATTGYEAPATGSQTYSASTDTPFDELLKYF
ESKHQEVEMPVDLQGILVDKSYITSPSDLNNFLFSPDSNFRQTVVELQGCSDVKMESWKIDSDG
ESLKRVITYTTAPSKLVKAVKATEEQSYLKADGNGYSVLLSVSTPDVPCGTYFRTEILFRILPG
PELDSEQLTSHLVISWRINFLQSTMMKGMIENGAKQGLQQNYAQFSDLLSQKIKPIDVDAGSDK
GQVLASLQRGQESDWNIAFLYFCNFGVLCSLFVTIYIAVHVQLRSSGAHKGLEFPGLDLPDSLS
EIVMGGLLFLQLRHIYKKISCFIQAREQKVGDHGVKAQGDGWLLTVALIEGTKLAPVDATGFSD
PYVVFTCNGKSKTSSIKFQTLEPQWN(+)
MSVWHQLFPKTSRHKFLHSTEVPVFGT*(-)
MSVSSLTRSSDHERVAPAVSKDIATQISPFH*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	24329146-24327436(+) 24327380-24329240(+) 24327414-24329213(-) 24327448-24329235(-)
Potential amino acid sequence	MLLVFLILMWYLLATVKVKQAQSSSKHWNLSGMEKFVSRCLWKQLVPHAHGPMILLVN(+) MSLETAGATRSWSDDLVSELTDIQKDYSLSSQGTGTSVALSYQESEACQEESVNGNLGRAGFTE EDNCSQDTDRNQTTAEDKSNGIPAAASTGIEVSKTDKSNKPSFVDRVCQMFVRKSDDVVTTPLV TTDKSEDVQEATTGYEAPATGSQTYSASTDTPFDELLKYFESKHQEVEMPVDLQGILVDKSYIT SPSDLNNFLFSPDSNFRQTVVELQGCSDVKMESWKIDSDGESLKRVITYTTAPSKLVKAVKATE EQSYLKADGNGYSVLLSVSTPDVPCGTYFRTEILFRILPGPELDSEQLTSHLVISWRINFLQST MMKGMIENGAKQGLQQNYAQFSDLLSQKIKPIDVDAGSDKGQVLASLQRGQESDWNIAFLYFCN FGVLCSLFVTIYIAVHVQLRSSGAHKGLEFPGLDLPDSLSEIVMGGLLFLQLRHIYKKISCFIQ AREQKVGDHGVKAQGDGWLLTVALIEGTKLAPVDATGFSDPYVVFTCNGKSKTSSIKFQTLEPQ WNGEICVAMSLETAGATRSWSDDLVSELTDIQKDYSLSSQGTGTSVALSYQESEACQEESVNGN LGRAGFTEEDNCSQDTDRNQTTAEDKSNGIPAAASTGIEVSKTDKSNKPSFVDRVCQMFVRKSD DVVTTPLVTTDKSEDVQEATTGYEAPATGSQTYSASTDTPFDELLKYFESKHQEVEMPVDLQGI LVDKSYITSPSDLNNFLFSPDSNFRQTVVELQGCSDVKMESWKIDSDGESLKRVITYTTAPSKL VKAVKATEEQSYLKADGNGYSVLLSVSTPDVPCGTYFRTEILFRILPGPELDSEQLTSHLVISW RINFLQSTMMKGMIENGAKQGLQQNYAQFSDLLSQKIKPIDVDAGSDKGQVLASLQRGQESDWN IAFLYFCNFGVLCSLFVTIYIAVHVQLRSSGAHKGLEFPGLDLPDSLSEIVMGGLLFLQLRHIY KKISCFIQAREQKVGDHGVKAQGDGWLLTVALIEGTKLAPVDATGFSDPYVVFTCNGKSKTSSI KFQTLEPQWNGEICVAMSLETAGATRSWSDDLVSELTDIQKDYSLSSQGTGTSVALSYQESEAC QEESVNGNLGRAGFTEEDNCSQDTDRNQTTAEDKSNGIPAAASTGIEVSKTDKSNKPSFVDRVC QMFVRKSDDVVTTPLVTTDKSEDVQEATTGYEAPATGSQTYSASTDTPFDELLKYFESKHQEVE MPVDLQGILVDKSYITSPSDLNNFLFSPDSNFRQTVVELQGCSDVKMESWKIDSDGESLKRVIT YTTAPSKLVKAVKATEEQSYLKADGNGYSVLLSVSTPDVPCGTYFRTEILFRILPGPELDSEQL TSHLVISWRINFLQSTMMKGMIENGAKQGLQQNYAQFSDLLSQKIKPIDVDAGSDKGQVLASLQ RGQESDWNIAFLYFCNFGVLCSLFVTIYIAVHVQLRSSGAHKGLEFPGLDLPDSLSEIVMGGLL FLQLRHIYKKISCFIQAREQKVGDHGVKAQGDGWLLTVALIEGTKLAPVDATGFSDPYVVFTCN GKSKTSSIKFQTLEPQWNGEICVAMSLETAGATRSWSDDLVSELTDIQKDYSLSSQGTGTSVAL SYQESEACQEESVNGNLGRAGFTEEDNCSQDTDRNQTTAEDKSNGIPAAASTGIEVSKTDKSNK PSFVDRVCQMFVRKSDDVVTTPLVTTDKSEDVQEATTGYEAPATGSQTYSASTDTPFDELLKYF ESKHQEVEMPVDLQGILVDKSYITSPSDLNNFLFSPDSNFRQTVVELQGCSDVKMESWKIDSDG ESLKRVITYTTAPSKLVKAVKATEEQSYLKADGNGYSVLLSVSTPDVPCGTYFRTEILFRILPG PELDSEQLTSHLVISWRINFLQSTMMKGMIENGAKQGLQQNYAQFSDLLSQKIKPIDVDAGSDK GQVLASLQRGQESDWNIAFLYFCNFGVLCSLFVTIYIAVHVQLRSSGAHKGLEFPGLDLPDSLS EIVMGGLLFLQLRHIYKKISCFIQAREQKVGDHGVKAQGDGWLLTVALIEGTKLAPVDATGFSD PYVVFTCNGKSKTSSIKFQTLEPQWN(+) MSVWHQLFPKTSRHKFLHSTEVPVFGT(-) MSVSSLTRSSDHERVAPAVSKDIATQISPFH*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os08g0492400_circ_g.1

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