Splice junction sequence |
CGACCAGGTCGCCGGCCTGCAGGTCCTCAACGACGGCAAGTGGATTGCCGTCAACCCGCAACCC GGTGCTCTCGTCATCAACATTGGCGACCAACTTCAGggagatcatcggcacgtactgcacagag gtaagagagctagggttcaggctatacgaggcgatatcggagagccttggactggagggaggat acatgagg
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 160 Transcript exons: 20890580-20890649,20890815-20890904 GGAGATCATCGGCACGTACTGCACAGAGGTAAGAGAGCTAGGGTTCAGGCTATACGAGGCGATA TCGGAGGCCGGCCTGCAGGTCCTCAACGACGGCAAGTGGATTGCCGTCAACCCGCAACCCGGTG CTCTCGTCATCAACATTGGCGACCAACTTCAG
Transcript length: 171 Transcript exons: 20890580-20890647,20890802-20890904 GGAGATCATCGGCACGTACTGCACAGAGGTAAGAGAGCTAGGGTTCAGGCTATACGAGGCGATA TCGGGGACGACCAGGTCGCCGGCCTGCAGGTCCTCAACGACGGCAAGTGGATTGCCGTCAACCC GCAACCCGGTGCTCTCGTCATCAACATTGGCGACCAACTTCAG
Transcript length: 204 Transcript exons: 20890580-20890731,20890853-20890904 GGAGATCATCGGCACGTACTGCACAGAGGTAAGAGAGCTAGGGTTCAGGCTATACGAGGCGATA TCGGAGAGCCTTGGACTGGAGGGAGGATACATGAGGGAGACGTTGGGGGAGCAGGAGCAGCACA TGGCGGTGAACTACTACCCACAGTCGTCAACCCGCAACCCGGTGCTCTCGTCATCAACATTGGC GACCAACTTCAG
Transcript length: 237 Transcript exons: 20890580-20890690,20890779-20890904 GGAGATCATCGGCACGTACTGCACAGAGGTAAGAGAGCTAGGGTTCAGGCTATACGAGGCGATA TCGGAGAGCCTTGGACTGGAGGGAGGATACATGAGGGAGACGTTGGGAACGCCCTCACCATCCT CCTCATGGACGACCAGGTCGCCGGCCTGCAGGTCCTCAACGACGGCAAGTGGATTGCCGTCAAC CCGCAACCCGGTGCTCTCGTCATCAACATTGGCGACCAACTTCAG
Transcript length: 248 Transcript exons: 20890580-20890662,20890740-20890904 GGAGATCATCGGCACGTACTGCACAGAGGTAAGAGAGCTAGGGTTCAGGCTATACGAGGCGATA TCGGAGAGCCTTGGACTGGCCGGAGCTCACCTATGGCCTCCCCGCGCACACCGACCCCAACGCC CTCACCATCCTCCTCATGGACGACCAGGTCGCCGGCCTGCAGGTCCTCAACGACGGCAAGTGGA TTGCCGTCAACCCGCAACCCGGTGCTCTCGTCATCAACATTGGCGACCAACTTCAG
Transcript length: 284 Transcript exons: 20890580-20890676,20890718-20890904 GGAGATCATCGGCACGTACTGCACAGAGGTAAGAGAGCTAGGGTTCAGGCTATACGAGGCGATA TCGGAGAGCCTTGGACTGGAGGGAGGATACATGCTACTACCCACAGTGCCCGGAGCCGGAGCTC ACCTATGGCCTCCCCGCGCACACCGACCCCAACGCCCTCACCATCCTCCTCATGGACGACCAGG TCGCCGGCCTGCAGGTCCTCAACGACGGCAAGTGGATTGCCGTCAACCCGCAACCCGGTGCTCT CGTCATCAACATTGGCGACCAACTTCAG
Transcript length: 287 Transcript exons: 20890580-20890724,20890763-20890904 GGAGATCATCGGCACGTACTGCACAGAGGTAAGAGAGCTAGGGTTCAGGCTATACGAGGCGATA TCGGAGAGCCTTGGACTGGAGGGAGGATACATGAGGGAGACGTTGGGGGAGCAGGAGCAGCACA TGGCGGTGAACTACTACCGCGCACACCGACCCCAACGCCCTCACCATCCTCCTCATGGACGACC AGGTCGCCGGCCTGCAGGTCCTCAACGACGGCAAGTGGATTGCCGTCAACCCGCAACCCGGTGC TCTCGTCATCAACATTGGCGACCAACTTCAG
Transcript length: 300 Transcript exons: 20890580-20890809,20890835-20890904 GGAGATCATCGGCACGTACTGCACAGAGGTAAGAGAGCTAGGGTTCAGGCTATACGAGGCGATA TCGGAGAGCCTTGGACTGGAGGGAGGATACATGAGGGAGACGTTGGGGGAGCAGGAGCAGCACA TGGCGGTGAACTACTACCCACAGTGCCCGGAGCCGGAGCTCACCTATGGCCTCCCCGCGCACAC CGACCCCAACGCCCTCACCATCCTCCTCATGGACGACCCGACGGCAAGTGGATTGCCGTCAACC CGCAACCCGGTGCTCTCGTCATCAACATTGGCGACCAACTTCAG
Transcript length: 302 Transcript exons: 20890580-20890669,20890693-20890904 GGAGATCATCGGCACGTACTGCACAGAGGTAAGAGAGCTAGGGTTCAGGCTATACGAGGCGATA TCGGAGAGCCTTGGACTGGAGGGAGGAGCAGGAGCAGCACATGGCGGTGAACTACTACCCACAG TGCCCGGAGCCGGAGCTCACCTATGGCCTCCCCGCGCACACCGACCCCAACGCCCTCACCATCC TCCTCATGGACGACCAGGTCGCCGGCCTGCAGGTCCTCAACGACGGCAAGTGGATTGCCGTCAA CCCGCAACCCGGTGCTCTCGTCATCAACATTGGCGACCAACTTCAG
Transcript length: 313 Transcript exons: 20890580-20890669,20890682-20890904 GGAGATCATCGGCACGTACTGCACAGAGGTAAGAGAGCTAGGGTTCAGGCTATACGAGGCGATA TCGGAGAGCCTTGGACTGGAGGGAGGGACGTTGGGGGAGCAGGAGCAGCACATGGCGGTGAACT ACTACCCACAGTGCCCGGAGCCGGAGCTCACCTATGGCCTCCCCGCGCACACCGACCCCAACGC CCTCACCATCCTCCTCATGGACGACCAGGTCGCCGGCCTGCAGGTCCTCAACGACGGCAAGTGG ATTGCCGTCAACCCGCAACCCGGTGCTCTCGTCATCAACATTGGCGACCAACTTCAG
Transcript length: 316 Transcript exons: 20890580-20890736,20890746-20890904 GGAGATCATCGGCACGTACTGCACAGAGGTAAGAGAGCTAGGGTTCAGGCTATACGAGGCGATA TCGGAGAGCCTTGGACTGGAGGGAGGATACATGAGGGAGACGTTGGGGGAGCAGGAGCAGCACA TGGCGGTGAACTACTACCCACAGTGCCCGCTCACCTATGGCCTCCCCGCGCACACCGACCCCAA CGCCCTCACCATCCTCCTCATGGACGACCAGGTCGCCGGCCTGCAGGTCCTCAACGACGGCAAG TGGATTGCCGTCAACCCGCAACCCGGTGCTCTCGTCATCAACATTGGCGACCAACTTCAG
Transcript length: 325 Transcript exons: 20890580-20890904 GGAGATCATCGGCACGTACTGCACAGAGGTAAGAGAGCTAGGGTTCAGGCTATACGAGGCGATA TCGGAGAGCCTTGGACTGGAGGGAGGATACATGAGGGAGACGTTGGGGGAGCAGGAGCAGCACA TGGCGGTGAACTACTACCCACAGTGCCCGGAGCCGGAGCTCACCTATGGCCTCCCCGCGCACAC CGACCCCAACGCCCTCACCATCCTCCTCATGGACGACCAGGTCGCCGGCCTGCAGGTCCTCAAC GACGGCAAGTGGATTGCCGTCAACCCGCAACCCGGTGCTCTCGTCATCAACATTGGCGACCAAC TTCAG
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Genomic sequence |
GGAGATCATCGGCACGTACTGCACAGAGGTAAGAGAGCTAGGGTTCAGGCTATACGAGGCGATA TCGGAGAGCCTTGGACTGGAGGGAGGATACATGAGGGAGACGTTGGGGGAGCAGGAGCAGCACA TGGCGGTGAACTACTACCCACAGTGCCCGGAGCCGGAGCTCACCTATGGCCTCCCCGCGCACAC CGACCCCAACGCCCTCACCATCCTCCTCATGGACGACCAGGTCGCCGGCCTGCAGGTCCTCAAC GACGGCAAGTGGATTGCCGTCAACCCGCAACCCGGTGCTCTCGTCATCAACATTGGCGACCAAC TTCAG |