Plant Circular RNA Database

Detail information of Os04g0588200_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os04g0588200_circ_g.1
					
						ID in PlantcircBase
						osa_circ_025014
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr4: 29722442-29726699  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os04g0588200						
					
						Parent gene annotation
						
							Similar to emb2411 (embryo defective 2411); ATP binding / ATP-de
pendent DNA helicase/ DNA binding. (Os04t0588200-00)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os04g0588200_circ_g.2 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os04t0588200-00:13

General Information
CircRNA Name	Os04g0588200_circ_g.1
ID in PlantcircBase	osa_circ_025014
Alias	NA
Organism	Oryza sativa
Position	chr4: 29722442-29726699 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os04g0588200
Parent gene annotation	Similar to emb2411 (embryo defective 2411); ATP binding / ATP-de pendent DNA helicase/ DNA binding. (Os04t0588200-00)
Parent gene strand	+
Alternative splicing	Os04g0588200_circ_g.2
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os04t0588200-00:13

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GCATGCCGTGAAGTCATTATTGATGAGAGGGGAATCTATTTTGCTAACCTCATATACCAATTCA
GCTATAGATAATTTGCTTATGAAGTTGAAGGCTGAGccagtgaaagcaacacgcttaaaacgct
gattgaagcagtccccaaaatattgaattggtacaagtgctttatgaaggtggagtagatgact
tgcacagc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1433
Transcript exons: 29722442-29722518,29722933-29722998,29723235-29723387,29
724196-29724251,29724328-29724388,29724460-29724570,2972
4814-29724948,29725021-29725251,29725805-29725879,297259
65-29726086,29726185-29726257,29726342-29726446,29726532
-29726699
CCAGTGAAAGCAACACGCTTAAAACGCTGATTGAAGCAGTCCCCAAAATATTGAATTGGTACAA
GTGCTTTATGAAGGTATCAAAATGTAACAATGTAAATTTTGGTCAAATTGAAGGACAAAAGACT
GTTGGAGTTGTGGAGGTAATGGATATTGAGGAGATGGCCTGGGCTCCAAGATATGGTTTGAAAG
GGATTATTGATGCTTCTATTAGATCAAGGGTTTCATGCAATGGTAGTTCATACGACAGAGTAAT
GCCTCTGGAGTTCAAAACTGGTAAAGGAACTAGTGGTCAGACAGCTGTGGAACACACTGCCCAA
GTGATATTGTACACGCTATTGATGACGGAGAGATACTTGAACAAGGATATTGACTTGGGTCTTC
TGTATTATCTTCACACAGACCAAACATTGGGCATCAAAGTCAAGAGGTCTGATTTAATTGGATT
AATAATGCGTCGGAATGAGCTTGCCACTGAGATCCTGAAGGCATCGATTTCACAGAGTTTTCCC
CCGATGATACAGGCGCATGGAGGCAATGCTGCAACTAGTGGGCTTGGTGATTTATTTGATAATC
TCGTGAATCACTTGACAGTTGCACATCATACCTTTCTTAAACACTGGGACAGATTGATCGATCT
TGAAGCTAGAGTTTCTCAGGTCAAGAAGAAGGAAATTTTCCAGCCACATCATTCAAATACTGGG
AGCAGGCATTCTTCCCCATCTTATTTTGTCCTTGATGTTACAAATGGACATTCAATAGATTCAT
CTGGAAAAAGCAAAAGATACATATATACTTTTCTGCGCCAGAAGTTGCAGCCTGAGACAGCTGA
TCAGCCAGGAGAACATGTTGAAAGTGTAGATTTTAGCCTCAAATGCGGTGATTCTGTGGTGCTT
AGCACAAAATCTGGGCGAATAGCTGTTGCAAATGGATACATAAGGGACCTCAGCCGTGCCCATA
TAACGGTTTCATTGCCACGACGTCTGAGACTTCCAGGAAGTAATTCCTTGTTAGAGCAAGGAGA
TCTCCAATGTGAAGTTTGGCGTATAGATAAGGATGAGTCTGTTTCTTCATTTGCTACCATGAGA
CTCAACCTTGTCCAACTATTTGCTGAGAATCCACAAAACTCTCACCTAAGGAAGTTGATTGTTG
ACCTCGAGGCTCCCAGATTTGATAGTGGAGGACTCCTAAGTCAAGATCCGGCACTATCATATAT
ACAATCATTGCCAAATTTGAACAATGACCAACAGAGATCGCTGCATAAAATTCTAGCAGCAAAA
GATTATGCGCTTATCCTAGGAATGCCTGGAACAGGCAAAACATATACGATGGTGCATGCCGTGA
AGTCATTATTGATGAGAGGGGAATCTATTTTGCTAACCTCATATACCAATTCAGCTATAGATAA
TTTGCTTATGAAGTTGAAGGCTGAG
						
					

						Genomic sequence
						
							CCAGTGAAAGCAACACGCTTAAAACGCTGATTGAAGCAGTCCCCAAAATATTGAATTGGTACAA
GTGCTTTATGAAGGTGGAGTAGATGACTTGCACAGCAGTTTTTTATATTCACTGTTGGGGCTCC
TTAAATGACCACAAGAATTTTCGAAGTCCATAGAGTTGCACCATGGTCATGAATACTCCACTTA
TTTTTGTTGAATTGGAACCTGTTGTTATACCCATATGGCACTCTTCTATTTCTTTTCAGAGGTT
CTAGGCAATGATTAATCACTCGATTGAGCCATTTTGTTTTTAATTGCTAATATATGCCATTTCT
ATTACGGAGTATAATTTTTTAAGAGAAAGTTTTGATCTAGTCTTTCCTTTATCAATCCTGGACT
AACTTGCCTGCAAAGTTCACCGGTGGATATATTGCATGTCTTGTCCTTTACTTGTTTAAAGAAG
ATACTGTTACATGTTCTGCGCTAATCATCGTCGGCACATCCAGGTATCAAAATGTAACAATGTA
AATTTTGGTCAAATTGAAGGACAAAAGACTGTTGGAGTTGTGGAGGTAGGCAACATCTTGAGCT
TGCAAAACTTTGGAATATGACCTTTTCATATTATGTAACTTATATGTAATATCTAGCAAGTTCG
TTTCATGATGGTAAACTCCTGTAGTCCTTGTGATTCTCAGCCATCAAAATTAGGCCAACACAGA
ACTTTCACTCTCCCCATGTCCTTCAGTACTTGAGTGTTGACTTGCACACCTCATTCTTAATGGC
TTTATTGAAATGAATTTCACCTTAGGTAATGGATATTGAGGAGATGGCCTGGGCTCCAAGATAT
GGTTTGAAAGGGATTATTGATGCTTCTATTAGATCAAGGGTTTCATGCAATGGTAGTTCATACG
ACAGAGTAATGCCTCTGGAGTTCAAAACTGGTAAAGGAACTAGTGGTCAGGTAAGCATATGCTC
CTGGATAGTGGATCCACTTGAAGATATATTATATCTTTTTCTGGCATGAGATATTTTTGTCACC
GGGGTTCTGGAAACTATTTATGCAATAAATTAGTGAAGTATTGCAACAACCAGGCTTCTTGAAA
GATTGTGCTGATTCCATAATCCATATTAATTCTTACAAGTAGTCATGCTCTCAATTTTTTAATC
AAAACCTGACGAGTTCATTGAGGTTTATATTGCACAGGCCAGAACTGTTGTTTTCTGTCTGTTT
TCCATAATGTAATTACTGGTTGCTTACTTGAATTAGATTCCCTGCTCTATTTTATCCAAAACTT
TAAGCTTTAGTTACAATTGACTAGAAACCTGTCAACCACCTAGTCATGTCCATTCTGTGGCAAC
AACCAATCAATAATAATGTCCTACAACAACTAATCGTACCTTAAAAAAACCCAATCATAGTTCA
TTACAAAATAATAATTAATCAATAATCCGGAGCCTCAGTTCCATTCTACTTTCACAAGGTCAAC
ATCCTTCAGTAGTTTTGATAATTAATACATGTCACATGTAGCGGCATCCAAATATATATTTTGA
TACCTTTTTTGAAATGTGATTGTGACTATTAGTGTTATCTTTACTTTATGTCCATTTCTGAAAA
GAATATTGTGTTATTTTTGTGGTGTTTCACATACTGTGTAGCACTCTAGTGTCTCCTATTTACC
TAACCATGTCTGAAAAAACAACAATTTAGTCCTTCAGAATAGATCCAGTTACTTCTCTATTGCT
CTTCACAATGGTTTATATATTTCCAGACAGCTGTGGAACACACTGCCCAAGTGATATTGTACAC
GCTATTGATGACGGAGAGGTATGATCTATCTATTTCTTCCACTGCAGGCTTTCCATATATATAT
ATTCCTTACCATGCTTTTCCATGTCTTCAGATACTTGAACAAGGATATTGACTTGGGTCTTCTG
TATTATCTTCACACAGACCAAACATTGGTAATCTTCTAAAACGACACTCAACATAAATTCTGTA
CCCATCCTTATCCATTTCTTGTTAATTTCTGAAGGGCATCAAAGTCAAGAGGTCTGATTTAATT
GGATTAATAATGCGTCGGAATGAGCTTGCCACTGAGATCCTGAAGGCATCGATTTCACAGAGTT
TTCCCCCGATGATACAGGTGGAACTAAAAACTTGTACATAAGTAATTCATTTGTTAGAACTCAA
ACAAAATCTTTCTTTCAGAGTCCATCTACATGTAATGGATGTCGACACCTGGTTTCATGCACCA
TATACCACAAGGTTCAATAACTCTATTCTTTTTAATATAAATGTGTTTTTTGATACAGTCCTGT
TGGTACAAATTTGTTCAATTACATAATATATACATGTGAAAAGCCATACTTATATTCTGATGCA
ACAGGCGCATGGAGGCAATGCTGCAACTAGTGGGCTTGGTGATTTATTTGATAATCTCGTGAAT
CACTTGACAGTTGCACATCATACCTTTCTTAAACACTGGGACAGATTGATCGATCTTGAAGCTA
GAGTTTCTCAGGTATCTTTAGCTTTTCTCACGTGCCGTGTATTTGATTTGTACTCTCTTGATCT
CATCTCATGCAAAATTCAGGTCAAGAAGAAGGAAATTTTCCAGCCACATCATTCAAATACTGGG
AGCAGGCATTCTTCCCCATCTTATTTTGTCCTTGATGTTACAAATGGACATTCAATAGATTCAT
CTGGAAAAAGCAAAAGATACATATATACTTTTCTGCGCCAGAAGTTGCAGCCTGAGACAGCTGA
TCAGCCAGGAGAACATGTTGAAAGTGTAGATTTTAGCCTCAAATGCGGTGATTCTGTGGTAAAC
CTTGTACACTTTCTGTATTCAATATTCAGCAACATTACTATGTTAGCTATTTCAAGTTCCCAGC
AACATTGATATTTTTATTGCATATATTTGGCACACCATATTGCAAATTTGTAATGTATGGCTCC
ATCTCATTTTGTTTGGAGTGTAGGGTTCTTTCCGTTTGAACTGTTATGTGCTTAATGTTGGTAA
GGAAGTAGAACTATAGGTTCATAGAATATGCTCAGTGCATATAAGGAGGTTAAATGGCAAATAT
AATACCAGTTGAAAACTTCTGCAGCTACTGCTAACCGATCAATCAGCAACAGCCAGCTAACACT
TTGGAGTATTGTAGCGTTATATTACTTTGTTTTTATCCTCCTGTTTTGTGATGTTTACTTTAGT
GCTGTAGGCCTATGGCCACAAAGGGGTCATTTTTTTATGCGTTATTACACATATAGTAGCTCAC
ACCCCTTTGCTTCATGGATACTTAGCTATTATAGTGATGCATGCTGGTTTATTTTTCTCCATAA
TGAAGTGTGTCATGTTTTCTTCTACTTTTCATTAGGTGCTTAGCACAAAATCTGGGCGAATAGC
TGTTGCAAATGGATACATAAGGGACCTCAGCCGTGCCCATATAACGGTATTACCTGACCTTGCG
AACCTGCTTAGGCATCCATTTCAATTTATTAGGTTGATTATTAATATTTCAACTGGAATTTTTG
TAGGTTTCATTGCCACGACGTCTGAGACTTCCAGGAAGTAATTCCTTGTTAGAGCAAGGAGATC
TCCAATGTGAAGTTTGGCGTATAGATAAGGATGAGTCTGTTTCTTCATTTGCTACCATGAGGTT
GGCCCTTGTTTTATTTTTTTTGTTGAAGGTTCTGAATTAGTAATTTAGAAAAGTTCCTTCTTCC
TAAATAAAGTTTGTATTTGAACTGTTGCCAGACTCAACCTTGTCCAACTATTTGCTGAGAATCC
ACAAAACTCTCACCTAAGGAAGTTGATTGTTGACCTCGAGGTCTGTTCGTCCACTAGCCTATTC
GTGCTATGTTTCTCCATACTGTTTTTGTTGTCTGTAATTTCCTTATTTGGATGTTGATAGGCTC
CCAGATTTGATAGTGGAGGACTCCTAAGTCAAGATCCGGCACTATCATATATACAATCATTGCC
AAATTTGAACAATGACCAACAGAGATCGCTGCATAAAGTAAATCTTTGGTCTTTAGTTCATTAT
TTTTTTTCTTCTGAAAATTCAATGTCACTATGTAAAGCGTACACTATGTTGCTTTCAGATTCTA
GCAGCAAAAGATTATGCGCTTATCCTAGGAATGCCTGGAACAGGCAAAACATATACGATGGTGC
ATGCCGTGAAGTCATTATTGATGAGAGGGGAATCTATTTTGCTAACCTCATATACCAATTCAGC
TATAGATAATTTGCTTATGAAGTTGAAGGCTGAG
						
					

			
		

Sequences
Splice junction sequence	GCATGCCGTGAAGTCATTATTGATGAGAGGGGAATCTATTTTGCTAACCTCATATACCAATTCA GCTATAGATAATTTGCTTATGAAGTTGAAGGCTGAGccagtgaaagcaacacgcttaaaacgct gattgaagcagtccccaaaatattgaattggtacaagtgctttatgaaggtggagtagatgact tgcacagc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1433 Transcript exons: 29722442-29722518,29722933-29722998,29723235-29723387,29 724196-29724251,29724328-29724388,29724460-29724570,2972 4814-29724948,29725021-29725251,29725805-29725879,297259 65-29726086,29726185-29726257,29726342-29726446,29726532 -29726699 CCAGTGAAAGCAACACGCTTAAAACGCTGATTGAAGCAGTCCCCAAAATATTGAATTGGTACAA GTGCTTTATGAAGGTATCAAAATGTAACAATGTAAATTTTGGTCAAATTGAAGGACAAAAGACT GTTGGAGTTGTGGAGGTAATGGATATTGAGGAGATGGCCTGGGCTCCAAGATATGGTTTGAAAG GGATTATTGATGCTTCTATTAGATCAAGGGTTTCATGCAATGGTAGTTCATACGACAGAGTAAT GCCTCTGGAGTTCAAAACTGGTAAAGGAACTAGTGGTCAGACAGCTGTGGAACACACTGCCCAA GTGATATTGTACACGCTATTGATGACGGAGAGATACTTGAACAAGGATATTGACTTGGGTCTTC TGTATTATCTTCACACAGACCAAACATTGGGCATCAAAGTCAAGAGGTCTGATTTAATTGGATT AATAATGCGTCGGAATGAGCTTGCCACTGAGATCCTGAAGGCATCGATTTCACAGAGTTTTCCC CCGATGATACAGGCGCATGGAGGCAATGCTGCAACTAGTGGGCTTGGTGATTTATTTGATAATC TCGTGAATCACTTGACAGTTGCACATCATACCTTTCTTAAACACTGGGACAGATTGATCGATCT TGAAGCTAGAGTTTCTCAGGTCAAGAAGAAGGAAATTTTCCAGCCACATCATTCAAATACTGGG AGCAGGCATTCTTCCCCATCTTATTTTGTCCTTGATGTTACAAATGGACATTCAATAGATTCAT CTGGAAAAAGCAAAAGATACATATATACTTTTCTGCGCCAGAAGTTGCAGCCTGAGACAGCTGA TCAGCCAGGAGAACATGTTGAAAGTGTAGATTTTAGCCTCAAATGCGGTGATTCTGTGGTGCTT AGCACAAAATCTGGGCGAATAGCTGTTGCAAATGGATACATAAGGGACCTCAGCCGTGCCCATA TAACGGTTTCATTGCCACGACGTCTGAGACTTCCAGGAAGTAATTCCTTGTTAGAGCAAGGAGA TCTCCAATGTGAAGTTTGGCGTATAGATAAGGATGAGTCTGTTTCTTCATTTGCTACCATGAGA CTCAACCTTGTCCAACTATTTGCTGAGAATCCACAAAACTCTCACCTAAGGAAGTTGATTGTTG ACCTCGAGGCTCCCAGATTTGATAGTGGAGGACTCCTAAGTCAAGATCCGGCACTATCATATAT ACAATCATTGCCAAATTTGAACAATGACCAACAGAGATCGCTGCATAAAATTCTAGCAGCAAAA GATTATGCGCTTATCCTAGGAATGCCTGGAACAGGCAAAACATATACGATGGTGCATGCCGTGA AGTCATTATTGATGAGAGGGGAATCTATTTTGCTAACCTCATATACCAATTCAGCTATAGATAA TTTGCTTATGAAGTTGAAGGCTGAG
Genomic sequence	CCAGTGAAAGCAACACGCTTAAAACGCTGATTGAAGCAGTCCCCAAAATATTGAATTGGTACAA GTGCTTTATGAAGGTGGAGTAGATGACTTGCACAGCAGTTTTTTATATTCACTGTTGGGGCTCC TTAAATGACCACAAGAATTTTCGAAGTCCATAGAGTTGCACCATGGTCATGAATACTCCACTTA TTTTTGTTGAATTGGAACCTGTTGTTATACCCATATGGCACTCTTCTATTTCTTTTCAGAGGTT CTAGGCAATGATTAATCACTCGATTGAGCCATTTTGTTTTTAATTGCTAATATATGCCATTTCT ATTACGGAGTATAATTTTTTAAGAGAAAGTTTTGATCTAGTCTTTCCTTTATCAATCCTGGACT AACTTGCCTGCAAAGTTCACCGGTGGATATATTGCATGTCTTGTCCTTTACTTGTTTAAAGAAG ATACTGTTACATGTTCTGCGCTAATCATCGTCGGCACATCCAGGTATCAAAATGTAACAATGTA AATTTTGGTCAAATTGAAGGACAAAAGACTGTTGGAGTTGTGGAGGTAGGCAACATCTTGAGCT TGCAAAACTTTGGAATATGACCTTTTCATATTATGTAACTTATATGTAATATCTAGCAAGTTCG TTTCATGATGGTAAACTCCTGTAGTCCTTGTGATTCTCAGCCATCAAAATTAGGCCAACACAGA ACTTTCACTCTCCCCATGTCCTTCAGTACTTGAGTGTTGACTTGCACACCTCATTCTTAATGGC TTTATTGAAATGAATTTCACCTTAGGTAATGGATATTGAGGAGATGGCCTGGGCTCCAAGATAT GGTTTGAAAGGGATTATTGATGCTTCTATTAGATCAAGGGTTTCATGCAATGGTAGTTCATACG ACAGAGTAATGCCTCTGGAGTTCAAAACTGGTAAAGGAACTAGTGGTCAGGTAAGCATATGCTC CTGGATAGTGGATCCACTTGAAGATATATTATATCTTTTTCTGGCATGAGATATTTTTGTCACC GGGGTTCTGGAAACTATTTATGCAATAAATTAGTGAAGTATTGCAACAACCAGGCTTCTTGAAA GATTGTGCTGATTCCATAATCCATATTAATTCTTACAAGTAGTCATGCTCTCAATTTTTTAATC AAAACCTGACGAGTTCATTGAGGTTTATATTGCACAGGCCAGAACTGTTGTTTTCTGTCTGTTT TCCATAATGTAATTACTGGTTGCTTACTTGAATTAGATTCCCTGCTCTATTTTATCCAAAACTT TAAGCTTTAGTTACAATTGACTAGAAACCTGTCAACCACCTAGTCATGTCCATTCTGTGGCAAC AACCAATCAATAATAATGTCCTACAACAACTAATCGTACCTTAAAAAAACCCAATCATAGTTCA TTACAAAATAATAATTAATCAATAATCCGGAGCCTCAGTTCCATTCTACTTTCACAAGGTCAAC ATCCTTCAGTAGTTTTGATAATTAATACATGTCACATGTAGCGGCATCCAAATATATATTTTGA TACCTTTTTTGAAATGTGATTGTGACTATTAGTGTTATCTTTACTTTATGTCCATTTCTGAAAA GAATATTGTGTTATTTTTGTGGTGTTTCACATACTGTGTAGCACTCTAGTGTCTCCTATTTACC TAACCATGTCTGAAAAAACAACAATTTAGTCCTTCAGAATAGATCCAGTTACTTCTCTATTGCT CTTCACAATGGTTTATATATTTCCAGACAGCTGTGGAACACACTGCCCAAGTGATATTGTACAC GCTATTGATGACGGAGAGGTATGATCTATCTATTTCTTCCACTGCAGGCTTTCCATATATATAT ATTCCTTACCATGCTTTTCCATGTCTTCAGATACTTGAACAAGGATATTGACTTGGGTCTTCTG TATTATCTTCACACAGACCAAACATTGGTAATCTTCTAAAACGACACTCAACATAAATTCTGTA CCCATCCTTATCCATTTCTTGTTAATTTCTGAAGGGCATCAAAGTCAAGAGGTCTGATTTAATT GGATTAATAATGCGTCGGAATGAGCTTGCCACTGAGATCCTGAAGGCATCGATTTCACAGAGTT TTCCCCCGATGATACAGGTGGAACTAAAAACTTGTACATAAGTAATTCATTTGTTAGAACTCAA ACAAAATCTTTCTTTCAGAGTCCATCTACATGTAATGGATGTCGACACCTGGTTTCATGCACCA TATACCACAAGGTTCAATAACTCTATTCTTTTTAATATAAATGTGTTTTTTGATACAGTCCTGT TGGTACAAATTTGTTCAATTACATAATATATACATGTGAAAAGCCATACTTATATTCTGATGCA ACAGGCGCATGGAGGCAATGCTGCAACTAGTGGGCTTGGTGATTTATTTGATAATCTCGTGAAT CACTTGACAGTTGCACATCATACCTTTCTTAAACACTGGGACAGATTGATCGATCTTGAAGCTA GAGTTTCTCAGGTATCTTTAGCTTTTCTCACGTGCCGTGTATTTGATTTGTACTCTCTTGATCT CATCTCATGCAAAATTCAGGTCAAGAAGAAGGAAATTTTCCAGCCACATCATTCAAATACTGGG AGCAGGCATTCTTCCCCATCTTATTTTGTCCTTGATGTTACAAATGGACATTCAATAGATTCAT CTGGAAAAAGCAAAAGATACATATATACTTTTCTGCGCCAGAAGTTGCAGCCTGAGACAGCTGA TCAGCCAGGAGAACATGTTGAAAGTGTAGATTTTAGCCTCAAATGCGGTGATTCTGTGGTAAAC CTTGTACACTTTCTGTATTCAATATTCAGCAACATTACTATGTTAGCTATTTCAAGTTCCCAGC AACATTGATATTTTTATTGCATATATTTGGCACACCATATTGCAAATTTGTAATGTATGGCTCC ATCTCATTTTGTTTGGAGTGTAGGGTTCTTTCCGTTTGAACTGTTATGTGCTTAATGTTGGTAA GGAAGTAGAACTATAGGTTCATAGAATATGCTCAGTGCATATAAGGAGGTTAAATGGCAAATAT AATACCAGTTGAAAACTTCTGCAGCTACTGCTAACCGATCAATCAGCAACAGCCAGCTAACACT TTGGAGTATTGTAGCGTTATATTACTTTGTTTTTATCCTCCTGTTTTGTGATGTTTACTTTAGT GCTGTAGGCCTATGGCCACAAAGGGGTCATTTTTTTATGCGTTATTACACATATAGTAGCTCAC ACCCCTTTGCTTCATGGATACTTAGCTATTATAGTGATGCATGCTGGTTTATTTTTCTCCATAA TGAAGTGTGTCATGTTTTCTTCTACTTTTCATTAGGTGCTTAGCACAAAATCTGGGCGAATAGC TGTTGCAAATGGATACATAAGGGACCTCAGCCGTGCCCATATAACGGTATTACCTGACCTTGCG AACCTGCTTAGGCATCCATTTCAATTTATTAGGTTGATTATTAATATTTCAACTGGAATTTTTG TAGGTTTCATTGCCACGACGTCTGAGACTTCCAGGAAGTAATTCCTTGTTAGAGCAAGGAGATC TCCAATGTGAAGTTTGGCGTATAGATAAGGATGAGTCTGTTTCTTCATTTGCTACCATGAGGTT GGCCCTTGTTTTATTTTTTTTGTTGAAGGTTCTGAATTAGTAATTTAGAAAAGTTCCTTCTTCC TAAATAAAGTTTGTATTTGAACTGTTGCCAGACTCAACCTTGTCCAACTATTTGCTGAGAATCC ACAAAACTCTCACCTAAGGAAGTTGATTGTTGACCTCGAGGTCTGTTCGTCCACTAGCCTATTC GTGCTATGTTTCTCCATACTGTTTTTGTTGTCTGTAATTTCCTTATTTGGATGTTGATAGGCTC CCAGATTTGATAGTGGAGGACTCCTAAGTCAAGATCCGGCACTATCATATATACAATCATTGCC AAATTTGAACAATGACCAACAGAGATCGCTGCATAAAGTAAATCTTTGGTCTTTAGTTCATTAT TTTTTTTCTTCTGAAAATTCAATGTCACTATGTAAAGCGTACACTATGTTGCTTTCAGATTCTA GCAGCAAAAGATTATGCGCTTATCCTAGGAATGCCTGGAACAGGCAAAACATATACGATGGTGC ATGCCGTGAAGTCATTATTGATGAGAGGGGAATCTATTTTGCTAACCTCATATACCAATTCAGC TATAGATAATTTGCTTATGAAGTTGAAGGCTGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.2256148

Conservation Information
Conserved circRNAs	NA
PMCS	0.2256148

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							29722514-29722468(+)
						
						Potential amino acid sequence
						
							MKVSKCNNVNFGQIEGQKTVGVVEVMDIEEMAWAPRYGLKGIIDASIRSRVSCNGSSYDRVMPL
EFKTGKGTSGQTAVEHTAQVILYTLLMTERYLNKDIDLGLLYYLHTDQTLGIKVKRSDLIGLIM
RRNELATEILKASISQSFPPMIQAHGGNAATSGLGDLFDNLVNHLTVAHHTFLKHWDRLIDLEA
RVSQVKKKEIFQPHHSNTGSRHSSPSYFVLDVTNGHSIDSSGKSKRYIYTFLRQKLQPETADQP
GEHVESVDFSLKCGDSVVLSTKSGRIAVANGYIRDLSRAHITVSLPRRLRLPGSNSLLEQGDLQ
CEVWRIDKDESVSSFATMRLNLVQLFAENPQNSHLRKLIVDLEAPRFDSGGLLSQDPALSYIQS
LPNLNNDQQRSLHKILAAKDYALILGMPGTGKTYTMVHAVKSLLMRGESILLTSYTNSAIDNLL
MKLKAEPVKATRLKR*(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	29722514-29722468(+)
Potential amino acid sequence	MKVSKCNNVNFGQIEGQKTVGVVEVMDIEEMAWAPRYGLKGIIDASIRSRVSCNGSSYDRVMPL EFKTGKGTSGQTAVEHTAQVILYTLLMTERYLNKDIDLGLLYYLHTDQTLGIKVKRSDLIGLIM RRNELATEILKASISQSFPPMIQAHGGNAATSGLGDLFDNLVNHLTVAHHTFLKHWDRLIDLEA RVSQVKKKEIFQPHHSNTGSRHSSPSYFVLDVTNGHSIDSSGKSKRYIYTFLRQKLQPETADQP GEHVESVDFSLKCGDSVVLSTKSGRIAVANGYIRDLSRAHITVSLPRRLRLPGSNSLLEQGDLQ CEVWRIDKDESVSSFATMRLNLVQLFAENPQNSHLRKLIVDLEAPRFDSGGLLSQDPALSYIQS LPNLNNDQQRSLHKILAAKDYALILGMPGTGKTYTMVHAVKSLLMRGESILLTSYTNSAIDNLL MKLKAEPVKATRLKR*(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os04g0588200_circ_g.1

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