Plant Circular RNA Database

Detail information of Os08g0547500_circ_g.3

			
						 General Information
					
						CircRNA Name
						Os08g0547500_circ_g.3
					
						ID in PlantcircBase
						osa_circ_037950
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr8: 27438418-27442074  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							ui-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os08g0547550						
					
						Parent gene annotation
						
							Hypothetical protein. (Os08t0547550-00)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os08g0547500_circ_g.2 Os08g0547500_circ_g.4 Os08g0547500_circ_g.5 Os08g0547500_circ_g.6 Os08g0547500_circ_g.7 						
					
						Support reads
						2
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os08t0547500-02:11
Os08t0547500-01:11
Os08t0547550-00:9
Os08t0547500-02:11
Os08t0547500-01:11

General Information
CircRNA Name	Os08g0547500_circ_g.3
ID in PlantcircBase	osa_circ_037950
Alias	NA
Organism	Oryza sativa
Position	chr8: 27438418-27442074 JBrowse»
Reference genome	IRGSP-1.0.38
Type	ui-circRNA
Identification method	CIRCexplorer
Parent gene	Os08g0547550
Parent gene annotation	Hypothetical protein. (Os08t0547550-00)
Parent gene strand	+
Alternative splicing	Os08g0547500_circ_g.2 Os08g0547500_circ_g.4 Os08g0547500_circ_g.5 Os08g0547500_circ_g.6 Os08g0547500_circ_g.7
Support reads	2
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os08t0547500-02:11 Os08t0547500-01:11 Os08t0547550-00:9 Os08t0547500-02:11 Os08t0547500-01:11

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CCGCAGCCGCACCGACACCATTATCCTCTCCTCCTTGGCCTCCGCCTTGTCCCATGCCGCCGCC
GCCTCCTCCTCCGCCGCCCCCATATCTCCTCCCCACctgatcctgatactcatcaagttcatcc
tcatggtcactatcagtcttcttcaacttggtgagacaactgatgtcactggtgagagtttctt
gttctgcg

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTGATCCTGATACTCATCAAGTTCATCCTCATGGTCACTATCAGTCTTCTTCAACTTGGTGAGA
CAACTGATGTCACTGGTGAGAGTTTCTTGTTCTGCGTCGCTGGGGCACATGTCTTTGGCTACTT
CATCAATGGTGCTCATGTCCTTCACTACTTCATCAGAAGAAACTTCACCAGAAAACTCAGAACG
GTCTACTGAAGAAGGGTTATCATTTTCTGGATACAAGCTTCTCCTAACCTTGTCAAACCTTCTT
GGGGTATGCTTCAAGATTTCATTAGGTGGTGTCTGGCTGGTGTACTCGGAATCATCAAACCAAC
TATTTGGAATAATCATAAAGCTAGCCCTGCAGCTTTTACTTCTAGACAACGCCCTATCCTTGGA
GCTCAGTATACACCTTTTTACAGTCAGACATCCATTAGGGTAAGGTTTCTGAATGTCAAAAGAA
ATGTTAGAATCACATGTATATAGCTTGACATCATTGTCTGTGGTACCATTAGATTCACATGTAT
CTACGATCTCATCTTGTTGCTCCTCCTCGACAGGGCACATCCTGGTAGGATCTTCCATTCTGTT
TGTTATGCTCTCAAGTTCTTGGTCTTCATCAGGTTGAGGGACTGCTTCTTTGGAGATCTCTAAT
TCAGGTGTTTGGAACTCGGTGTCCTGGGGCAGCAAAAGGTCGAATTTGTGACTTGTGCTTCTTC
TATGCTCATGTATATCTATGCATTGGACTTCTCTACAATGCTCTTCAGAGACTTCTGATGCAGT
TCTGGAAGCCGCTTCTGTCATATGATATGACTCTATGCAATCAGAAGAACTATGGTGGCTGGGA
GGGTGCCAAGGTGACATAAATTTTTCATGCTTTGTTTCTTCAGGAAGATCCACTGTTTGAACAG
GGAATACAATATCATCACGGTCATCACTGAAGACATAGGATCCATTAAACACAGCATTATCTTG
ATCCTGGTAAGGAACACCAGAAGTATCTGAAACTGAAAATGCTTCTTCAGACGCATTCCGTGCA
AAAGACTCTGAGGATCGACTATGCTCATCCTATCAGAGGAAAGCCAGTTCATTAAGTTTTGCAC
AGAGCAATAGTTCTAATATTAAGTATGAAAGAAACAAATACCCATCGCTTCGCAACGCGGCCGT
CACTATGGTCATCACAATCGCTTTTAAGCAAGCAGTCAAGTTGAGACTTCACAGTATCTCTTTC
TTCCATCAATTCTTTTAGCTGTTTCTCCAGCTGAACACACATACACAAATGGGTATAAAGTTAC
AAGGTGCAAAAGATACAGAAGCATGGTATCTTATATGATAGGATAAAAAAATACCTTTTTAATT
TGTGCATCCTTCTCCCTCAATGCTTCAGCATGAGTAGTGCAGGAGGCTGGCGCCGGAAATTTAA
TCTCACTTTGTAATCTTTCAAGTTCTCTTTGTAGATGCTTCACGAGTGCCTTATCAGACATCAC
TACATTGACCTGTGCATTTGTAACTACCTCCTTTGCACAAGTAGCAAACAATAGTGTATTCCTG
GATTGCTCAATATGACTCCGTGCAGGGCTCATTGTGCAGATAATAGCAGTTCTTGCATTGCCTC
CCAAGGAAGACTGTAATATACGAGTCAGCTTTGAATCTCTGTAGGGGATATGGCCATTTCTTCC
CTTACTGCAACATGAACATATAGCTTAGACTAAATTGGATGGTAATAATGCAATCAAAGAGTTG
AATTGCGACGCGCAAAAGGAATTCAAAATTAGTTCATCCAGTGAATATGAAAGAGAGAGGAAAA
AGGGTGCGCAGAGACTCCTTGACTACTTAGAAACATATATTCTGGATAGAAGGCAAACCACTAA
AGATTACAAGTTCTTGCGAGAGGAAAATGAACCTGAGTTGCCGAACAACTTTTCCCAGTGTAAG
AAGACTTCGATTGATATGGCTACCTTCTTTTAACCTCACTCCAGCTGAAGCAGTCTGAGATGCA
CGCTCGCTTCCTGCTAGGTCAACAAAGTTCTGCCCAGAAAAGAATCTCAGTGCATGGAACACAC
AATACAAACGAGTCTTGAATATAGGATGATATTCCATACCACACAAGCTACAAGGGTGCTTGAG
TTGCCTCTTCCCAAATACTGTCTAGTAGAACTTTCAATTGTCTGAAATTAACAGTCTGTCAAAA
AATCATTTCCTAAAAAGTAGCATAAAACAAAAAAAAAATATTGATGTGCCACTGACCAATCTGA
GTATTTGATGGGACCTTGAACTCGTTTCATTCAAAGCAGTTTCTCCAATCTGCCTTTGAGCTGT
AGCAAACCAGATTAAGCAATTAAAGAAAATTGAAGGCCAATGCCTCTCTTATTTCCAACAAGTT
CAGTCCCACACCTTCACACACAGCAAGAAGGTTCCTAAGATGATCCTTGTCCCTCAAGGTTTCC
TCAGTGAGTTTCTCTACGGTAGTTCCTTTCTGTTTTGAAATCAAATGGAAACATGAACAACTCG
AGAACAGTATACAGGTTGGAGGAAAACACAAACAGATTATGTAGTAAGTTCAAGCTAGTAAAAG
GAGAACAGTGAGTGTACCTCCGGATCATCAAGAAGTCTGAGGGGTGTGGTGTCGTGGCTCAGGA
GGTCCCTCACAGCTTCATTGTATATCTCTATTGCCGAAAATCTCAAAATGAATTCTCTTTCAGG
ATGCTGTAGCAATGGCACACAATGAGACGGATAAATTTTCGCAGAGGTAAAGTAAAGCAATGTT
CACATTGCACACACCTTTTCGATGTAGTCATAGATGTCGAGAACACTATACTCGGTTATCCCGG
TCATCGTGTAAGTCTTGCCACTGCTTGTTTGCCCATACGCGAATATGCTTGCTGCCAAGAACCA
ACCCAAGTGCAGATGTTAGTTACCCCACATCACCTCACAAAACTCAAAGCGACAATGCAACGAA
GTTGCGTCATTTCTTCGGTGCTTACAGTTGATTCCACTGACAACTGATAGAGCAACTTCTTTCG
CTCCTTCCTCGTAGACCTGCCTTGTAGAGGAATCAGGACCAAACACCCTATCTGTAAAAAATTT
TTGAAAGGAACAAGAAAGTAGAAGAGATTCATTCTTCAAGCAAACAGGCTGCCAGCCAAACAAA
ATGCATAGTACTACATGGCTACAAACATCAAAACTTTTCCAAACTACATGGCTACAAAATGCAT
AGTACTACATGGTGCCTTGTTTAGTTCCAAACTTTTTCTTCAAACTTCCAACTTTTCCATCGCA
TCAAAACTTTCCTACACACATAAACTTCCAACTTTTCCGTCACATCGTTCCAATTTCAACCAAA
CTTCCAATTTTAGCGTGGACTAAACACACTCCAAGAAACTTGATTGACCAAAACAATGTGAGAT
TCCCATTTGCAAAATTGAGGTGAAGGAGGATGTAGGTGGTACTGTACCGTAGGTGTAGGCGGTG
GGGAACATGGCGCGCTCGGGGACGGTGCTGCGGAACATGACGGTGGTGGGGCTGATGCACTCCC
AGTCGCAGCTGTCGCCGGCCTCCCTGCCGTTGAGCGGCCGCAGCCGCACCGACACCATTATCCT
CTCCTCCTTGGCCTCCGCCTTGTCCCATGCCGCCGCCGCCTCCTCCTCCGCCGCCCCCATATCT
CCTCCCCAC
						
					

			
		

Sequences
Splice junction sequence	CCGCAGCCGCACCGACACCATTATCCTCTCCTCCTTGGCCTCCGCCTTGTCCCATGCCGCCGCC GCCTCCTCCTCCGCCGCCCCCATATCTCCTCCCCACctgatcctgatactcatcaagttcatcc tcatggtcactatcagtcttcttcaacttggtgagacaactgatgtcactggtgagagtttctt gttctgcg
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTGATCCTGATACTCATCAAGTTCATCCTCATGGTCACTATCAGTCTTCTTCAACTTGGTGAGA CAACTGATGTCACTGGTGAGAGTTTCTTGTTCTGCGTCGCTGGGGCACATGTCTTTGGCTACTT CATCAATGGTGCTCATGTCCTTCACTACTTCATCAGAAGAAACTTCACCAGAAAACTCAGAACG GTCTACTGAAGAAGGGTTATCATTTTCTGGATACAAGCTTCTCCTAACCTTGTCAAACCTTCTT GGGGTATGCTTCAAGATTTCATTAGGTGGTGTCTGGCTGGTGTACTCGGAATCATCAAACCAAC TATTTGGAATAATCATAAAGCTAGCCCTGCAGCTTTTACTTCTAGACAACGCCCTATCCTTGGA GCTCAGTATACACCTTTTTACAGTCAGACATCCATTAGGGTAAGGTTTCTGAATGTCAAAAGAA ATGTTAGAATCACATGTATATAGCTTGACATCATTGTCTGTGGTACCATTAGATTCACATGTAT CTACGATCTCATCTTGTTGCTCCTCCTCGACAGGGCACATCCTGGTAGGATCTTCCATTCTGTT TGTTATGCTCTCAAGTTCTTGGTCTTCATCAGGTTGAGGGACTGCTTCTTTGGAGATCTCTAAT TCAGGTGTTTGGAACTCGGTGTCCTGGGGCAGCAAAAGGTCGAATTTGTGACTTGTGCTTCTTC TATGCTCATGTATATCTATGCATTGGACTTCTCTACAATGCTCTTCAGAGACTTCTGATGCAGT TCTGGAAGCCGCTTCTGTCATATGATATGACTCTATGCAATCAGAAGAACTATGGTGGCTGGGA GGGTGCCAAGGTGACATAAATTTTTCATGCTTTGTTTCTTCAGGAAGATCCACTGTTTGAACAG GGAATACAATATCATCACGGTCATCACTGAAGACATAGGATCCATTAAACACAGCATTATCTTG ATCCTGGTAAGGAACACCAGAAGTATCTGAAACTGAAAATGCTTCTTCAGACGCATTCCGTGCA AAAGACTCTGAGGATCGACTATGCTCATCCTATCAGAGGAAAGCCAGTTCATTAAGTTTTGCAC AGAGCAATAGTTCTAATATTAAGTATGAAAGAAACAAATACCCATCGCTTCGCAACGCGGCCGT CACTATGGTCATCACAATCGCTTTTAAGCAAGCAGTCAAGTTGAGACTTCACAGTATCTCTTTC TTCCATCAATTCTTTTAGCTGTTTCTCCAGCTGAACACACATACACAAATGGGTATAAAGTTAC AAGGTGCAAAAGATACAGAAGCATGGTATCTTATATGATAGGATAAAAAAATACCTTTTTAATT TGTGCATCCTTCTCCCTCAATGCTTCAGCATGAGTAGTGCAGGAGGCTGGCGCCGGAAATTTAA TCTCACTTTGTAATCTTTCAAGTTCTCTTTGTAGATGCTTCACGAGTGCCTTATCAGACATCAC TACATTGACCTGTGCATTTGTAACTACCTCCTTTGCACAAGTAGCAAACAATAGTGTATTCCTG GATTGCTCAATATGACTCCGTGCAGGGCTCATTGTGCAGATAATAGCAGTTCTTGCATTGCCTC CCAAGGAAGACTGTAATATACGAGTCAGCTTTGAATCTCTGTAGGGGATATGGCCATTTCTTCC CTTACTGCAACATGAACATATAGCTTAGACTAAATTGGATGGTAATAATGCAATCAAAGAGTTG AATTGCGACGCGCAAAAGGAATTCAAAATTAGTTCATCCAGTGAATATGAAAGAGAGAGGAAAA AGGGTGCGCAGAGACTCCTTGACTACTTAGAAACATATATTCTGGATAGAAGGCAAACCACTAA AGATTACAAGTTCTTGCGAGAGGAAAATGAACCTGAGTTGCCGAACAACTTTTCCCAGTGTAAG AAGACTTCGATTGATATGGCTACCTTCTTTTAACCTCACTCCAGCTGAAGCAGTCTGAGATGCA CGCTCGCTTCCTGCTAGGTCAACAAAGTTCTGCCCAGAAAAGAATCTCAGTGCATGGAACACAC AATACAAACGAGTCTTGAATATAGGATGATATTCCATACCACACAAGCTACAAGGGTGCTTGAG TTGCCTCTTCCCAAATACTGTCTAGTAGAACTTTCAATTGTCTGAAATTAACAGTCTGTCAAAA AATCATTTCCTAAAAAGTAGCATAAAACAAAAAAAAAATATTGATGTGCCACTGACCAATCTGA GTATTTGATGGGACCTTGAACTCGTTTCATTCAAAGCAGTTTCTCCAATCTGCCTTTGAGCTGT AGCAAACCAGATTAAGCAATTAAAGAAAATTGAAGGCCAATGCCTCTCTTATTTCCAACAAGTT CAGTCCCACACCTTCACACACAGCAAGAAGGTTCCTAAGATGATCCTTGTCCCTCAAGGTTTCC TCAGTGAGTTTCTCTACGGTAGTTCCTTTCTGTTTTGAAATCAAATGGAAACATGAACAACTCG AGAACAGTATACAGGTTGGAGGAAAACACAAACAGATTATGTAGTAAGTTCAAGCTAGTAAAAG GAGAACAGTGAGTGTACCTCCGGATCATCAAGAAGTCTGAGGGGTGTGGTGTCGTGGCTCAGGA GGTCCCTCACAGCTTCATTGTATATCTCTATTGCCGAAAATCTCAAAATGAATTCTCTTTCAGG ATGCTGTAGCAATGGCACACAATGAGACGGATAAATTTTCGCAGAGGTAAAGTAAAGCAATGTT CACATTGCACACACCTTTTCGATGTAGTCATAGATGTCGAGAACACTATACTCGGTTATCCCGG TCATCGTGTAAGTCTTGCCACTGCTTGTTTGCCCATACGCGAATATGCTTGCTGCCAAGAACCA ACCCAAGTGCAGATGTTAGTTACCCCACATCACCTCACAAAACTCAAAGCGACAATGCAACGAA GTTGCGTCATTTCTTCGGTGCTTACAGTTGATTCCACTGACAACTGATAGAGCAACTTCTTTCG CTCCTTCCTCGTAGACCTGCCTTGTAGAGGAATCAGGACCAAACACCCTATCTGTAAAAAATTT TTGAAAGGAACAAGAAAGTAGAAGAGATTCATTCTTCAAGCAAACAGGCTGCCAGCCAAACAAA ATGCATAGTACTACATGGCTACAAACATCAAAACTTTTCCAAACTACATGGCTACAAAATGCAT AGTACTACATGGTGCCTTGTTTAGTTCCAAACTTTTTCTTCAAACTTCCAACTTTTCCATCGCA TCAAAACTTTCCTACACACATAAACTTCCAACTTTTCCGTCACATCGTTCCAATTTCAACCAAA CTTCCAATTTTAGCGTGGACTAAACACACTCCAAGAAACTTGATTGACCAAAACAATGTGAGAT TCCCATTTGCAAAATTGAGGTGAAGGAGGATGTAGGTGGTACTGTACCGTAGGTGTAGGCGGTG GGGAACATGGCGCGCTCGGGGACGGTGCTGCGGAACATGACGGTGGTGGGGCTGATGCACTCCC AGTCGCAGCTGTCGCCGGCCTCCCTGCCGTTGAGCGGCCGCAGCCGCACCGACACCATTATCCT CTCCTCCTTGGCCTCCGCCTTGTCCCATGCCGCCGCCGCCTCCTCCTCCGCCGCCCCCATATCT CCTCCCCAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.137699829

Conservation Information
Conserved circRNAs	NA
PMCS	0.137699829

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							27441881-27438615(+)
27442063-27441475(-)
27438451-27441475(-)
						
					

						Potential amino acid sequence
						
							MARSGTVLRNMTVVGLMHSQSQLSPASLPLSGRSRTDTIILSSLASALSHAAAASSSAAPISPP
HLILILIKFILMVTISLLQLGETTDVTGESFLFCVAGAHVFGYFINGAHVLHYFIRRNFTRKLR
TVY*(+)
MGAAEEEAAAAWDKAEAKEERIMVSVRLRPLNGREAGDSCDWECISPTTVMFRSTVPERAMFPT
AYTYDRVFGPDSSTRQVYEEGAKEVALSVVSGINSSIFAYGQTSSGKTYTMTGITEYSVLDIYD
YIEKHPEREFILRFSAIEIYNEAVRDLLSHDTTPLRLLDDPEKGTTVEKLTEETLRDKDHLRNL
LAVCEAQRQIGETALNETSSRSHQILRLTIESSTRQYLGRGNSSTLVACVNFVDLAGSERASQT
ASAGVRLKEGSHINRSLLTLGKVVRQLSKGRNGHIPYRDSKLTRILQSSLGGNARTAIICTMSP
ARSHIEQSRNTLLFATCAKEVVTNAQVNVVMSDKALVKHLQRELERLQSEIKFPAPASCTTHAE
ALREKDAQIKKLEKQLKELMEERDTVKSQLDCLLKSDCDDHSDGRVAKRWDEHSRSSESFARNA
SEEAFSVSDTSGVPYQDQDNAVFNGSYVFSDDRDDIVFPVQTVDLPEETKHEKFMSPWHPPSHH
SSSDCIESYHMTEAASRTASEVSEEHCREVQCIDIHEHRRSTSHKFDLLLPQDTEFQTPELEIS
KEAVPQPDEDQELESITNRMEDPTRMCPVEEEQQDEIVDTCESNGTTDNDVKLYTCDSNISFDI
QKPYPNGCLTVKRCILSSKDRALSRSKSCRASFMIIPNSWFDDSEYTSQTPPNEILKHTPRRFD
KVRRSLYPENDNPSSVDRSEFSGEVSSDEVVKDMSTIDEVAKDMCPSDAEQETLTSDISCLTKL
KKTDSDHEDELDEYQDQVGRRYGGGGGGGGGGMGQGGGQGGEDNGVGAAAAAQRQGGRRQLRLG
VHQPHHRHVPQHRPRARHVPHRLHLR*(-)
MRMNLMSIRIRWGGDMGAAEEEAAAAWDKAEAKEERIMVSVRLRPLNGREAGDSCDWECISPTT
VMFRSTVPERAMFPTAYTYDRVFGPDSSTRQVYEEGAKEVALSVVSGINSSIFAYGQTSSGKTY
TMTGITEYSVLDIYDYIEKHPEREFILRFSAIEIYNEAVRDLLSHDTTPLRLLDDPEKGTTVEK
LTEETLRDKDHLRNLLAVCEAQRQIGETALNETSSRSHQILRLTIESSTRQYLGRGNSSTLVAC
VNFVDLAGSERASQTASAGVRLKEGSHINRSLLTLGKVVRQLSKGRNGHIPYRDSKLTRILQSS
LGGNARTAIICTMSPARSHIEQSRNTLLFATCAKEVVTNAQVNVVMSDKALVKHLQRELERLQS
EIKFPAPASCTTHAEALREKDAQIKKLEKQLKELMEERDTVKSQLDCLLKSDCDDHSDGRVAKR
WDEHSRSSESFARNASEEAFSVSDTSGVPYQDQDNAVFNGSYVFSDDRDDIVFPVQTVDLPEET
KHEKFMSPWHPPSHHSSSDCIESYHMTEAASRTASEVSEEHCREVQCIDIHEHRRSTSHKFDLL
LPQDTEFQTPELEISKEAVPQPDEDQELESITNRMEDPTRMCPVEEEQQDEIVDTCESNGTTDN
DVKLYTCDSNISFDIQKPYPNGCLTVKRCILSSKDRALSRSKSCRASFMIIPNSWFDDSEYTSQ
TPPNEILKHTPRRFDKVRRSLYPENDNPSSVDRSEFSGEVSSDEVVKDMSTIDEVAKDMCPSDA
EQETLTSDISCLTKLKKTDSDHEDELDEYQDQVGRRYGGGGGGGGGGMGQGGGQGGEDNGVGAA
AAAQRQGGRRQLRLGVHQPHHRHVPQHRPRARHVPHRLHLR*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	27441881-27438615(+) 27442063-27441475(-) 27438451-27441475(-)
Potential amino acid sequence	MARSGTVLRNMTVVGLMHSQSQLSPASLPLSGRSRTDTIILSSLASALSHAAAASSSAAPISPP HLILILIKFILMVTISLLQLGETTDVTGESFLFCVAGAHVFGYFINGAHVLHYFIRRNFTRKLR TVY(+) MGAAEEEAAAAWDKAEAKEERIMVSVRLRPLNGREAGDSCDWECISPTTVMFRSTVPERAMFPT AYTYDRVFGPDSSTRQVYEEGAKEVALSVVSGINSSIFAYGQTSSGKTYTMTGITEYSVLDIYD YIEKHPEREFILRFSAIEIYNEAVRDLLSHDTTPLRLLDDPEKGTTVEKLTEETLRDKDHLRNL LAVCEAQRQIGETALNETSSRSHQILRLTIESSTRQYLGRGNSSTLVACVNFVDLAGSERASQT ASAGVRLKEGSHINRSLLTLGKVVRQLSKGRNGHIPYRDSKLTRILQSSLGGNARTAIICTMSP ARSHIEQSRNTLLFATCAKEVVTNAQVNVVMSDKALVKHLQRELERLQSEIKFPAPASCTTHAE ALREKDAQIKKLEKQLKELMEERDTVKSQLDCLLKSDCDDHSDGRVAKRWDEHSRSSESFARNA SEEAFSVSDTSGVPYQDQDNAVFNGSYVFSDDRDDIVFPVQTVDLPEETKHEKFMSPWHPPSHH SSSDCIESYHMTEAASRTASEVSEEHCREVQCIDIHEHRRSTSHKFDLLLPQDTEFQTPELEIS KEAVPQPDEDQELESITNRMEDPTRMCPVEEEQQDEIVDTCESNGTTDNDVKLYTCDSNISFDI QKPYPNGCLTVKRCILSSKDRALSRSKSCRASFMIIPNSWFDDSEYTSQTPPNEILKHTPRRFD KVRRSLYPENDNPSSVDRSEFSGEVSSDEVVKDMSTIDEVAKDMCPSDAEQETLTSDISCLTKL KKTDSDHEDELDEYQDQVGRRYGGGGGGGGGGMGQGGGQGGEDNGVGAAAAAQRQGGRRQLRLG VHQPHHRHVPQHRPRARHVPHRLHLR(-) MRMNLMSIRIRWGGDMGAAEEEAAAAWDKAEAKEERIMVSVRLRPLNGREAGDSCDWECISPTT VMFRSTVPERAMFPTAYTYDRVFGPDSSTRQVYEEGAKEVALSVVSGINSSIFAYGQTSSGKTY TMTGITEYSVLDIYDYIEKHPEREFILRFSAIEIYNEAVRDLLSHDTTPLRLLDDPEKGTTVEK LTEETLRDKDHLRNLLAVCEAQRQIGETALNETSSRSHQILRLTIESSTRQYLGRGNSSTLVAC VNFVDLAGSERASQTASAGVRLKEGSHINRSLLTLGKVVRQLSKGRNGHIPYRDSKLTRILQSS LGGNARTAIICTMSPARSHIEQSRNTLLFATCAKEVVTNAQVNVVMSDKALVKHLQRELERLQS EIKFPAPASCTTHAEALREKDAQIKKLEKQLKELMEERDTVKSQLDCLLKSDCDDHSDGRVAKR WDEHSRSSESFARNASEEAFSVSDTSGVPYQDQDNAVFNGSYVFSDDRDDIVFPVQTVDLPEET KHEKFMSPWHPPSHHSSSDCIESYHMTEAASRTASEVSEEHCREVQCIDIHEHRRSTSHKFDLL LPQDTEFQTPELEISKEAVPQPDEDQELESITNRMEDPTRMCPVEEEQQDEIVDTCESNGTTDN DVKLYTCDSNISFDIQKPYPNGCLTVKRCILSSKDRALSRSKSCRASFMIIPNSWFDDSEYTSQ TPPNEILKHTPRRFDKVRRSLYPENDNPSSVDRSEFSGEVSSDEVVKDMSTIDEVAKDMCPSDA EQETLTSDISCLTKLKKTDSDHEDELDEYQDQVGRRYGGGGGGGGGGMGQGGGQGGEDNGVGAA AAAQRQGGRRQLRLGVHQPHHRHVPQHRPRARHVPHRLHLR*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os08g0547500_circ_g.3

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