Plant Circular RNA Database

Detail information of Os08g0472600_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os08g0472600_circ_g.1
					
						ID in PlantcircBase
						osa_circ_037325
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr8: 23275630-23279328  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os08g0472600						
					
						Parent gene annotation
						
							Alpha1,3-fucosyltransferase, Basipetal auxin transport, Gravitro
pic response, N-glycan biosynthesis (Os08t0472600-01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os08g0472600_circ_g.2 Os08g0472600_circ_g.3 Os08g0472600_circ_g.4 Os08g0472600_circ_g.5 Os08g0472600_circ_g.6 Os08g0472600_circ_g.7 Os08g0472600_circ_g.8 Os08g0472600_circ_g.9 Os08g0472600_circ_g.10 						
					
						Support reads
						1
					
						Tissues
						shoot
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os08t0472600-01:5

General Information
CircRNA Name	Os08g0472600_circ_g.1
ID in PlantcircBase	osa_circ_037325
Alias	NA
Organism	Oryza sativa
Position	chr8: 23275630-23279328 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os08g0472600
Parent gene annotation	Alpha1,3-fucosyltransferase, Basipetal auxin transport, Gravitro pic response, N-glycan biosynthesis (Os08t0472600-01)
Parent gene strand	+
Alternative splicing	Os08g0472600_circ_g.2 Os08g0472600_circ_g.3 Os08g0472600_circ_g.4 Os08g0472600_circ_g.5 Os08g0472600_circ_g.6 Os08g0472600_circ_g.7 Os08g0472600_circ_g.8 Os08g0472600_circ_g.9 Os08g0472600_circ_g.10
Support reads	1
Tissues	shoot
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os08t0472600-01:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTATGAATCGCCCATGTAGTTGTTCAAGCAAAAGAGGAAAGGTATACCACTTGTTTGTCAGAGA
AAGAGGGCGGTTCAAGACAGAGAGCATTTTTCTGAGgattggaataaatgttctgtaggatgtg
aatttgggttttcagctactaagacgcctgatgctacttttggaattgccccagatcctactgt
agagagta

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 893
Transcript exons: 23275630-23275790,23276309-23276550,23277421-23277525,23
277987-23278143,23279101-23279328
GATTGGAATAAATGTTCTGTAGGATGTGAATTTGGGTTTTCAGCTACTAAGACGCCTGATGCTA
CTTTTGGAATTGCCCCAGATCCTACTGTAGAGAGTATCCTCAGATCGATGGAGTCATCTCAGTA
TTATTCAGAGAACAACATTGCTGTGGCTCGAGGGAGAGGTTACAAAATTGTGATGACAACAAGC
CTTTCCTCAGATGTACCTGTTGGCTACTTTTCATGGGCTGAATATGATATAATGGCACCTGTGC
CTCCAAAAACTGAAGAAGCCCTAGCTGCAGCATTTATTTCAAACTGTGGTGCACGTAATTTTCG
TTTGCAAGCCCTTGAGATGCTTGAGAGCTTAGATGTCAAAATTGATTCATATGGTAGTTGCCAT
CGTAATCATGATGGCAAAGTTGATAAAGTGGAAACTTTGAAGCGCTACAAATTTAGCTTGGCCT
TTGAGAATTCCAACGAGGAAGATTATGTTACAGAAAAGTTTTTTCAATCGCTGGTAACAGGAGC
TATTCCAGTTGTGATTGGTGCTCCAAACATTCAAGAGTTCTCTCCTGGAGAAGGCGCAATATTA
CACATTAAAGAGCTTGATGATGTTCCTTCAATTGCCAAGACAATGAAACATATTGCATCAAATC
AGGAAGCCTTTAATCAATCTTTGAGATGGAAGTATGATGGCCCATCTGATTCTTTCAAGGCCCT
TATTGACATGGCAGCGGTTCATTCATCATGTCGTCTTTGCATACATGTCGCGACGAAGATTCAT
GAGAAAGAGGAAAGGACACCAAAATTTATGAATCGCCCATGTAGTTGTTCAAGCAAAAGAGGAA
AGGTATACCACTTGTTTGTCAGAGAAAGAGGGCGGTTCAAGACAGAGAGCATTTTTCTGAG
						
					

						Genomic sequence
						
							GATTGGAATAAATGTTCTGTAGGATGTGAATTTGGGTTTTCAGCTACTAAGACGCCTGATGCTA
CTTTTGGAATTGCCCCAGATCCTACTGTAGAGAGTATCCTCAGATCGATGGAGTCATCTCAGTA
TTATTCAGAGAACAACATTGCTGTGGCTCGAGGGTGGGTAAGAACCAAGTTAATTCTGGTTGGG
TGATTTCTCTGCCTATTTAAATGATATTTTAACCTTATTTGTTGTGTTCCACGTACACTTTGGT
AGTTTGTAACCATGTGTGACTTCACTTTGGTACATAAACTCAGAACTGTTAGATGTTTTCATAA
TGTAAGCAATTTTCATACTGGCTCTAAGATCCCTACTCTGTTATCCATGTTGAGAAGTCACACA
TGGTTAATAGTCACACATGGTTGTAGGTTAATACTTTTATTTGTAATATTAAGAAAGTAAAGAG
CGCTATTTGGCTACTATATTGGCTTCGTGCTGATGCTCAAACATTCTCACTTAAAATAAAATAG
TAAAATAGTAATTAACCAGTATTGTATTGAATATGCTATTGTTCTTGTGAACCTATTACCATCA
TGTATCCCCAGCTACGGAACTATTCATTTTAATCCTCAGTGTGATTTATTATTTTTAGAAGCAT
AATTCTAATGGACTGAGCAATCCTGATGCTCTCTCACAGGAGAGGTTACAAAATTGTGATGACA
ACAAGCCTTTCCTCAGATGTACCTGTTGGCTACTTTTCATGGGCTGAATATGATATAATGGCAC
CTGTGCCTCCAAAAACTGAAGAAGCCCTAGCTGCAGCATTTATTTCAAACTGTGGTGCACGTAA
TTTTCGTTTGCAAGCCCTTGAGATGCTTGAGAGCTTAGATGTCAAAATTGATTCATATGGTAGT
TGCCATCGTAATCATGATGGCAAAGGTACACTTTCTCTTCCATATTTCGAGTGACATACTTTAT
TAACTTTTGTGAAATTTACTCGTATATAGTTAATGAGATATGTTGCCTTATGCTTCCAAGAGTG
TAATGAGTGGCCAGCCACAGCAAAGTGTTCCACGTGGCATGGTTTTAATTGTTCCAAGCAATCA
AAAATATTGAATACCATATAAAACTATCACAACTGCCAATTCTTGCTGCTATGTCAATATGCTA
ATTGTCAGGTCCATCTCCCTTCTGTTTAACTGAGATAATTCCTAACTGGGTATGTGAAAATCAC
ATGACAAATTTTCTTTTCTTTTTGATTTTATGAAGCCTTTAAGGATACCGTGTTTGATGATTTA
GAATCTACTTTTGTATTAAGCACACTGATGACCTCCACATTTTATTTATATGATCACAATAATT
TCAACATCAATATTTGCACATAACCTTTTTTTAAATCTTAATAACTATTGCTGGGAAATGATGT
TGCTGCCAGAAGTTGGTATATAGAGTAGCACATAGTATTATTATTAGAGCAGCAGCAAATGATG
TTTCAACCTATAAAAGATTAAAAACCAAAGAGCTATCGTTATGTTCAACTTTGTTAATTAAGAT
TTTATCTATCTCTGCATTAAGTTATTCTTCCTTGGTCCTTCTGGCTGCAAATATAATTTGTTTT
GGACATTGATGCACTGTCCAGGGCAACATTTTTTCCTTTTCTTATATCATATTGTGTTGTTAAA
ATCTGATAAATGCTTTGCCTACATAAATGATGCTTTTATGATTGGACTAGTTTGTATTTCTATT
GTTGTACTGCATATGTTTTGAGGAAAGAAATGTTATGCGAACTTTATATGTTGCCTGGTGCAGT
TGATAAAGTGGAAACTTTGAAGCGCTACAAATTTAGCTTGGCCTTTGAGAATTCCAACGAGGAA
GATTATGTTACAGAAAAGTTTTTTCAATCGCTGGTAACAGGTAATTGGATAAGCTATTAAGCAT
TCCTGACCCAAACCCCCAGCCCACACCCACCCATCCACACAATTTGCATTGGTAAATTCTCATC
CAACATTGGATCCAGAGTTAGTATAAGCTTTATGCCCATTTGTTAGTCATCTCTCTGGGGTGGA
ATATTGCACAGACATGGAAAATCATATTATCGTGACTCTCACCAATTGAAATATATTATGAAAG
TACTTTCATGAAGCAAGTGAACAAATATTGTGAAACAGATCGATTAGGATCTTCCAAATCATAA
ACCAAATTGTCATATTTGTGATGTACATATTTCCCATATCTACTGATTAACATTTTATTTCTGT
TCACCATGAATTTTATTTAATTCCAATTCCAGCAATTGATTAAATTTGAACTCTGTGAAATTTA
GATTTCTAACTGGAATGGAAGTGATTGAAAATTTCATCTGCGCTGTGCTACAGGAGCTATTCCA
GTTGTGATTGGTGCTCCAAACATTCAAGAGTTCTCTCCTGGAGAAGGCGCAATATTACACATTA
AAGAGCTTGATGATGTTCCTTCAATTGCCAAGACAATGAAACATATTGCATCAAATCAGGAAGC
CTTTAATCAATCTTTGAGGTAAATGCTCCTGCTTTCCCTGTTGACTTCATGCCTGAGATAGATT
TGTTTCTCATTCACTAATGGTATTGTTGGAGCATCACGTGTACACCAATCATATTTTTGGAACA
TCTAATGATCTCCGCAAATTCAAGCATAATCATGGTGTATGTCTGCATGTACACTGAATTTGCA
TTAAAAAGCAATCACCAGTTCAGCATTGGAAATATATGGAGTCATGCTTATCAATTTTTGGCAT
AGTTCTTTTAAGGAATAAGATGTAATGCTGTATTATACATTATTAACTTGCTATGATGTTGCTT
TCACCCACTCATTTTTTCATTTACCAAGATCTTGCAAACAAGCATTATCAAATATGTAACTTGT
TGAGGAACAAAATTACTCTACAATTAAAGATTTTTTCTGGAAATCCATTTCTCAATCTTAAAAT
GCTATTGCAGCGATACTCTATTGTAAACTTGTTGGTACCAATCATGTGACTCTGGCACTCTGGA
AAAGCATGAAACCACCATCAGAAGCTACTGGAATTAGTCTTTAGTATAACTGGCTGTCTAACAT
AGATTTTAACTTGCTATTGCTGCTTTAGATAGATTATTCTTATTTATCTTAGAATGAAGAAATA
GCCAAATTATAGTACTGCCATGAGACTCTACTGGGTGTATTTTCTTTTTGTCTTTTTTGTTTCA
CTCTCCCATATCTTGTAAATCTATTTGTTGGAACCATTATTCAAGACATAATTATAAAAAAACT
GATGCAGTTTAGGCTTAGAGTAAGTTGGCGTCCTCATTACCTTTGATTTGCTTGAAGGTATCCT
TGAGTAGTTCAGGGGTTCCATTCACGTGTAGATGATTCTGCTGATAAAATTACTGTACAGTTTG
TCAAAGATCCTTTATCAGCCATTATTAGGTCACCATTTTCTGTGCTGTGCATATCTCATTCTAT
GTTTTGAATTTGTAGATGGAAGTATGATGGCCCATCTGATTCTTTCAAGGCCCTTATTGACATG
GCAGCGGTTCATTCATCATGTCGTCTTTGCATACATGTCGCGACGAAGATTCATGAGAAAGAGG
AAAGGACACCAAAATTTATGAATCGCCCATGTAGTTGTTCAAGCAAAAGAGGAAAGGTATACCA
CTTGTTTGTCAGAGAAAGAGGGCGGTTCAAGACAGAGAGCATTTTTCTGAG
						
					

			
		

Sequences
Splice junction sequence	TTATGAATCGCCCATGTAGTTGTTCAAGCAAAAGAGGAAAGGTATACCACTTGTTTGTCAGAGA AAGAGGGCGGTTCAAGACAGAGAGCATTTTTCTGAGgattggaataaatgttctgtaggatgtg aatttgggttttcagctactaagacgcctgatgctacttttggaattgccccagatcctactgt agagagta
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 893 Transcript exons: 23275630-23275790,23276309-23276550,23277421-23277525,23 277987-23278143,23279101-23279328 GATTGGAATAAATGTTCTGTAGGATGTGAATTTGGGTTTTCAGCTACTAAGACGCCTGATGCTA CTTTTGGAATTGCCCCAGATCCTACTGTAGAGAGTATCCTCAGATCGATGGAGTCATCTCAGTA TTATTCAGAGAACAACATTGCTGTGGCTCGAGGGAGAGGTTACAAAATTGTGATGACAACAAGC CTTTCCTCAGATGTACCTGTTGGCTACTTTTCATGGGCTGAATATGATATAATGGCACCTGTGC CTCCAAAAACTGAAGAAGCCCTAGCTGCAGCATTTATTTCAAACTGTGGTGCACGTAATTTTCG TTTGCAAGCCCTTGAGATGCTTGAGAGCTTAGATGTCAAAATTGATTCATATGGTAGTTGCCAT CGTAATCATGATGGCAAAGTTGATAAAGTGGAAACTTTGAAGCGCTACAAATTTAGCTTGGCCT TTGAGAATTCCAACGAGGAAGATTATGTTACAGAAAAGTTTTTTCAATCGCTGGTAACAGGAGC TATTCCAGTTGTGATTGGTGCTCCAAACATTCAAGAGTTCTCTCCTGGAGAAGGCGCAATATTA CACATTAAAGAGCTTGATGATGTTCCTTCAATTGCCAAGACAATGAAACATATTGCATCAAATC AGGAAGCCTTTAATCAATCTTTGAGATGGAAGTATGATGGCCCATCTGATTCTTTCAAGGCCCT TATTGACATGGCAGCGGTTCATTCATCATGTCGTCTTTGCATACATGTCGCGACGAAGATTCAT GAGAAAGAGGAAAGGACACCAAAATTTATGAATCGCCCATGTAGTTGTTCAAGCAAAAGAGGAA AGGTATACCACTTGTTTGTCAGAGAAAGAGGGCGGTTCAAGACAGAGAGCATTTTTCTGAG
Genomic sequence	GATTGGAATAAATGTTCTGTAGGATGTGAATTTGGGTTTTCAGCTACTAAGACGCCTGATGCTA CTTTTGGAATTGCCCCAGATCCTACTGTAGAGAGTATCCTCAGATCGATGGAGTCATCTCAGTA TTATTCAGAGAACAACATTGCTGTGGCTCGAGGGTGGGTAAGAACCAAGTTAATTCTGGTTGGG TGATTTCTCTGCCTATTTAAATGATATTTTAACCTTATTTGTTGTGTTCCACGTACACTTTGGT AGTTTGTAACCATGTGTGACTTCACTTTGGTACATAAACTCAGAACTGTTAGATGTTTTCATAA TGTAAGCAATTTTCATACTGGCTCTAAGATCCCTACTCTGTTATCCATGTTGAGAAGTCACACA TGGTTAATAGTCACACATGGTTGTAGGTTAATACTTTTATTTGTAATATTAAGAAAGTAAAGAG CGCTATTTGGCTACTATATTGGCTTCGTGCTGATGCTCAAACATTCTCACTTAAAATAAAATAG TAAAATAGTAATTAACCAGTATTGTATTGAATATGCTATTGTTCTTGTGAACCTATTACCATCA TGTATCCCCAGCTACGGAACTATTCATTTTAATCCTCAGTGTGATTTATTATTTTTAGAAGCAT AATTCTAATGGACTGAGCAATCCTGATGCTCTCTCACAGGAGAGGTTACAAAATTGTGATGACA ACAAGCCTTTCCTCAGATGTACCTGTTGGCTACTTTTCATGGGCTGAATATGATATAATGGCAC CTGTGCCTCCAAAAACTGAAGAAGCCCTAGCTGCAGCATTTATTTCAAACTGTGGTGCACGTAA TTTTCGTTTGCAAGCCCTTGAGATGCTTGAGAGCTTAGATGTCAAAATTGATTCATATGGTAGT TGCCATCGTAATCATGATGGCAAAGGTACACTTTCTCTTCCATATTTCGAGTGACATACTTTAT TAACTTTTGTGAAATTTACTCGTATATAGTTAATGAGATATGTTGCCTTATGCTTCCAAGAGTG TAATGAGTGGCCAGCCACAGCAAAGTGTTCCACGTGGCATGGTTTTAATTGTTCCAAGCAATCA AAAATATTGAATACCATATAAAACTATCACAACTGCCAATTCTTGCTGCTATGTCAATATGCTA ATTGTCAGGTCCATCTCCCTTCTGTTTAACTGAGATAATTCCTAACTGGGTATGTGAAAATCAC ATGACAAATTTTCTTTTCTTTTTGATTTTATGAAGCCTTTAAGGATACCGTGTTTGATGATTTA GAATCTACTTTTGTATTAAGCACACTGATGACCTCCACATTTTATTTATATGATCACAATAATT TCAACATCAATATTTGCACATAACCTTTTTTTAAATCTTAATAACTATTGCTGGGAAATGATGT TGCTGCCAGAAGTTGGTATATAGAGTAGCACATAGTATTATTATTAGAGCAGCAGCAAATGATG TTTCAACCTATAAAAGATTAAAAACCAAAGAGCTATCGTTATGTTCAACTTTGTTAATTAAGAT TTTATCTATCTCTGCATTAAGTTATTCTTCCTTGGTCCTTCTGGCTGCAAATATAATTTGTTTT GGACATTGATGCACTGTCCAGGGCAACATTTTTTCCTTTTCTTATATCATATTGTGTTGTTAAA ATCTGATAAATGCTTTGCCTACATAAATGATGCTTTTATGATTGGACTAGTTTGTATTTCTATT GTTGTACTGCATATGTTTTGAGGAAAGAAATGTTATGCGAACTTTATATGTTGCCTGGTGCAGT TGATAAAGTGGAAACTTTGAAGCGCTACAAATTTAGCTTGGCCTTTGAGAATTCCAACGAGGAA GATTATGTTACAGAAAAGTTTTTTCAATCGCTGGTAACAGGTAATTGGATAAGCTATTAAGCAT TCCTGACCCAAACCCCCAGCCCACACCCACCCATCCACACAATTTGCATTGGTAAATTCTCATC CAACATTGGATCCAGAGTTAGTATAAGCTTTATGCCCATTTGTTAGTCATCTCTCTGGGGTGGA ATATTGCACAGACATGGAAAATCATATTATCGTGACTCTCACCAATTGAAATATATTATGAAAG TACTTTCATGAAGCAAGTGAACAAATATTGTGAAACAGATCGATTAGGATCTTCCAAATCATAA ACCAAATTGTCATATTTGTGATGTACATATTTCCCATATCTACTGATTAACATTTTATTTCTGT TCACCATGAATTTTATTTAATTCCAATTCCAGCAATTGATTAAATTTGAACTCTGTGAAATTTA GATTTCTAACTGGAATGGAAGTGATTGAAAATTTCATCTGCGCTGTGCTACAGGAGCTATTCCA GTTGTGATTGGTGCTCCAAACATTCAAGAGTTCTCTCCTGGAGAAGGCGCAATATTACACATTA AAGAGCTTGATGATGTTCCTTCAATTGCCAAGACAATGAAACATATTGCATCAAATCAGGAAGC CTTTAATCAATCTTTGAGGTAAATGCTCCTGCTTTCCCTGTTGACTTCATGCCTGAGATAGATT TGTTTCTCATTCACTAATGGTATTGTTGGAGCATCACGTGTACACCAATCATATTTTTGGAACA TCTAATGATCTCCGCAAATTCAAGCATAATCATGGTGTATGTCTGCATGTACACTGAATTTGCA TTAAAAAGCAATCACCAGTTCAGCATTGGAAATATATGGAGTCATGCTTATCAATTTTTGGCAT AGTTCTTTTAAGGAATAAGATGTAATGCTGTATTATACATTATTAACTTGCTATGATGTTGCTT TCACCCACTCATTTTTTCATTTACCAAGATCTTGCAAACAAGCATTATCAAATATGTAACTTGT TGAGGAACAAAATTACTCTACAATTAAAGATTTTTTCTGGAAATCCATTTCTCAATCTTAAAAT GCTATTGCAGCGATACTCTATTGTAAACTTGTTGGTACCAATCATGTGACTCTGGCACTCTGGA AAAGCATGAAACCACCATCAGAAGCTACTGGAATTAGTCTTTAGTATAACTGGCTGTCTAACAT AGATTTTAACTTGCTATTGCTGCTTTAGATAGATTATTCTTATTTATCTTAGAATGAAGAAATA GCCAAATTATAGTACTGCCATGAGACTCTACTGGGTGTATTTTCTTTTTGTCTTTTTTGTTTCA CTCTCCCATATCTTGTAAATCTATTTGTTGGAACCATTATTCAAGACATAATTATAAAAAAACT GATGCAGTTTAGGCTTAGAGTAAGTTGGCGTCCTCATTACCTTTGATTTGCTTGAAGGTATCCT TGAGTAGTTCAGGGGTTCCATTCACGTGTAGATGATTCTGCTGATAAAATTACTGTACAGTTTG TCAAAGATCCTTTATCAGCCATTATTAGGTCACCATTTTCTGTGCTGTGCATATCTCATTCTAT GTTTTGAATTTGTAGATGGAAGTATGATGGCCCATCTGATTCTTTCAAGGCCCTTATTGACATG GCAGCGGTTCATTCATCATGTCGTCTTTGCATACATGTCGCGACGAAGATTCATGAGAAAGAGG AAAGGACACCAAAATTTATGAATCGCCCATGTAGTTGTTCAAGCAAAAGAGGAAAGGTATACCA CTTGTTTGTCAGAGAAAGAGGGCGGTTCAAGACAGAGAGCATTTTTCTGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.212080612

Conservation Information
Conserved circRNAs	NA
PMCS	0.212080612

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							23275742-23275648(+)
						
						Potential amino acid sequence
						
							MESSQYYSENNIAVARGRGYKIVMTTSLSSDVPVGYFSWAEYDIMAPVPPKTEEALAAAFISNC
GARNFRLQALEMLESLDVKIDSYGSCHRNHDGKVDKVETLKRYKFSLAFENSNEEDYVTEKFFQ
SLVTGAIPVVIGAPNIQEFSPGEGAILHIKELDDVPSIAKTMKHIASNQEAFNQSLRWKYDGPS
DSFKALIDMAAVHSSCRLCIHVATKIHEKEERTPKFMNRPCSCSSKRGKVYHLFVRERGRFKTE
SIFLRIGINVL*(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	23275742-23275648(+)
Potential amino acid sequence	MESSQYYSENNIAVARGRGYKIVMTTSLSSDVPVGYFSWAEYDIMAPVPPKTEEALAAAFISNC GARNFRLQALEMLESLDVKIDSYGSCHRNHDGKVDKVETLKRYKFSLAFENSNEEDYVTEKFFQ SLVTGAIPVVIGAPNIQEFSPGEGAILHIKELDDVPSIAKTMKHIASNQEAFNQSLRWKYDGPS DSFKALIDMAAVHSSCRLCIHVATKIHEKEERTPKFMNRPCSCSSKRGKVYHLFVRERGRFKTE SIFLRIGINVL*(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os08g0472600_circ_g.1

Address

Any questions?

Supported by