Detail information of BGIOSGA031561_circ_g.3


General Information
CircRNA Name BGIOSGA031561_circ_g.3
ID in PlantcircBase osi_circ_002907
Alias 10:18738083|18738232
Organism Oryza sativa ssp. indica
Position chr10: 18738083-18738232  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   e-circRNA
Identification method find_circ
Parent gene BGIOSGA031561
Parent gene annotation NA
Parent gene strand -
Alternative splicing BGIOSGA031561_circ_g.1 BGIOSGA031561_circ_g.2
Support reads NA
Tissues leaf
Exon boundary   No-No
Splicing signals   GT-AG
Number of exons covered BGIOSGA031561-TA:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   GACCTGCAGCCACGGGAAGTGGCGGAGCGCGGCGAAGGCGATGGTGAGCGACGGGTTGAGGTGG
GCGCCGGAGATgaaggggtggaagacgcccttgagggcgaagccggcgcagatggagccgagca
cctggacggcgacgtacgccgg
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence GAAGGGGTGGAAGACGCCCTTGAGGGCGAAGCCGGCGCAGATGGAGCCGAGCACCTGGACGGCG
ACGTACGCCGGGACCTGCAGCCACGGGAAGTGGCGGAGCGCGGCGAAGGCGATGGTGAGCGACG
GGTTGAGGTGGGCGCCGGAGAT
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Huang et al., 2021