Plant Circular RNA Database

Detail information of Os10g0497000_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os10g0497000_circ_g.1
					
						ID in PlantcircBase
						osa_circ_007312
					
						Alias
						Os_ciR6816
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr10: 18910419-18914138  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, find_circ
					
						Parent gene
						
							Os10g0497000						
					
						Parent gene annotation
						
							Armadillo-type fold domain containing protein. (Os10t0497000-01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os10g0495000_circ_g.1 Os10g0495000_circ_ag.1 Os10g0495300_circ_g.1 Os10g0495300_circ_g.2 Os10g0495400_circ_ag.1 Os10g0495600_circ_g.1 Os10g0495600_circ_g.2 Os10g0495600_circ_g.3 Os10g0495600_circ_g.4 Os10g0495900_circ_g.1 Os10g0496900_circ_g.1 Os10g0496900_circ_g.2 Os10g0496900_circ_g.3 Os10g0496900_circ_g.4 Os10g0496900_circ_g.5 Os10g0496900_circ_g.6 Os10g0496900_circ_g.7 Os10g0496900_circ_g.8 Os10g0496900_circ_g.9 Os10g0497000_circ_ag.1 Os10g0497000_circ_ag.2 Os10g0497000_circ_ag.2 Os10g0497000_circ_g.3 Os10g0497000_circ_ag.4 Os10g0497000_circ_g.5 Os10g0497000_circ_ag.6 Os10g0497000_circ_g.7 Os10g0497100_circ_ag.1 Os10g0497100_circ_ag.2 Os10g0497100_circ_igg.1 						
					
						Support reads
						2/1
					
						Tissues
						root/root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os10t0497000-01:8

General Information
CircRNA Name	Os10g0497000_circ_g.1
ID in PlantcircBase	osa_circ_007312
Alias	Os_ciR6816
Organism	Oryza sativa
Position	chr10: 18910419-18914138 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, find_circ
Parent gene	Os10g0497000
Parent gene annotation	Armadillo-type fold domain containing protein. (Os10t0497000-01)
Parent gene strand	+
Alternative splicing	Os10g0495000_circ_g.1 Os10g0495000_circ_ag.1 Os10g0495300_circ_g.1 Os10g0495300_circ_g.2 Os10g0495400_circ_ag.1 Os10g0495600_circ_g.1 Os10g0495600_circ_g.2 Os10g0495600_circ_g.3 Os10g0495600_circ_g.4 Os10g0495900_circ_g.1 Os10g0496900_circ_g.1 Os10g0496900_circ_g.2 Os10g0496900_circ_g.3 Os10g0496900_circ_g.4 Os10g0496900_circ_g.5 Os10g0496900_circ_g.6 Os10g0496900_circ_g.7 Os10g0496900_circ_g.8 Os10g0496900_circ_g.9 Os10g0497000_circ_ag.1 Os10g0497000_circ_ag.2 Os10g0497000_circ_ag.2 Os10g0497000_circ_g.3 Os10g0497000_circ_ag.4 Os10g0497000_circ_g.5 Os10g0497000_circ_ag.6 Os10g0497000_circ_g.7 Os10g0497100_circ_ag.1 Os10g0497100_circ_ag.2 Os10g0497100_circ_igg.1
Support reads	2/1
Tissues	root/root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os10t0497000-01:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GTCTGTTAACTGCAACAGCATGAAGGTTCGTGGAGCCATTTCCAGCTGCCTTCCAAATAACAGC
TTAAAAATCCTTGTGCCTGCGCTAGAGAAATTTGTGaatctcataaaggatacctcaacttcag
ctttggacctaaatgaaggaacatctttgcaaagtgccgctctcctcttgaaatgtttgaaaat
attggaaa

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							AATCTCATAAAGGATACCTCAACTTCAGCTTTGGACCTAAATGAAGGAACATCTTTGCAAAGTG
CCGCTCTCCTCTTGAAATGTTTGAAAATATTGGAAAATGCCACATTTCTAAGCGATGATAACAA
GGTAATGTTCCTTATATATTCTGTTTCAGTTTAGTACCCATTTTCTTCTTCTGTACCATCTTCT
CCCCTCATTTGTTCTGTGCAAAATGTGCAAACAGTGTGACTTTGTATTTCTGCTTAACATTTTT
CTTTTTTTCCTGAAAAGCAGTATAAACTCTTACACTCATTTTGCTTCTTGCAGACCCATTTGCT
TAATATGAGTAGAAAATTGTACCCGAAACGCTCCTCGCTTTCTTTTGTTGGTGTCATTATCAGT
ATTATTGAGTTATTATCAGGTATTTTTCTTAATAATACAATATGTCCGCTAACACAATAAAATG
TTTTAAACATCCAGTATGTTAAAGTTGCAGTCTGACGCCTATTTTGTTTTGCTGCAGCTCTTTC
AATACTGCAGAATTCTTCTGTTGTTTCCAGCTCTACATATCCGAAATCGTCTAAAGTCTCTCAA
CAGAGTTGCTCTGGTAATAACAAACACCAAATTTGTTTGATCAACTCGTTGGCTTTTCTGTGCA
CTGTTTCAATATAGTTTGGTCGCCATTCAAGTCTCACTACAGATGTTGAACTTGACCTGACACG
GTGGCACCAATATTTATAAAACGCTACCTGATATTTTTAATATTTCATGTTTCCTGACCCAGAT
TATCTTGTTGGTTCCTCATATAAGTTTAATTAGTGTCGTTCTTGAAACTTTGTTATGCAGCAGA
TGTCATGGGGGGAACTTCATTTAATGATGGAAAGCGCAAGAACTCGAAGAAAAAAAACCTTTTG
TCGAACCAGACACGCCATAGTTGCTTATCTTCAAAATCAGAAGTTTCTCATATTACTATATCTT
CTGGTAGTGATGCTGGTCTGTCACAGAAGGCATTCAATTGTTCTCCATCTATATCAAGCAATGG
GGCATCAAGTGGTTCATTAGGCGAGAGACATAGCAATGGTGGTGCTTTGAAGTTGAATATAAAA
AAGGATCGTGGCAATGCAAATCCAATTAGAGGCTCAAGTGGGTGGATTTCAATAAGAGCGCACA
GTTCTGATGGGAACTCCAGAGAAATGGCAAAAAGACGCCGTCTATCTGAAAATGTAATCACCGA
CAGTGGTGGCGGTGATGACCCTTTTGCTTTTGATGATGTTGATCAGGAGCCTTCAAATTGGGAA
CTGCTTGGTCCAAAAAAGAAATCGCCTCAGAAACATCAAGACAAATCAGGAAATGGAGTGCTAG
TTGCAAGTCATGAACCAGACCAACCTGAAGATCTTAATCAGTCGGGTACAACATCTCTTTTTAG
TGCTAAAGATGAATCCAGTCTTTTGGAAGACTGCCTCTTGGCATCAGTTAAGGTAATTAAATAT
GTTTCCTTCTGATCTTTCTTGTTTCTTCTTCAAGAGAATATACATTCTTGGGTCACAGTTTCTC
GGTTTGTCTTTGTGACTTTGTTGAGTGACATATTTTGAATTCACAAAATTTCCTTTTCAATATG
GCTCCTCAATCTATAGCATCTGTCGTGTATGTATTCTGTACAAAATAGTATTGTAACATCTCCT
AGAAGAAATTGGCACCATCCATATCATACAGTAGCAATTTATGAGACGTGATCCTGATTGGAGG
TTTAGGACAGAGCCTCGAGCTAAATTGCTATTGTATTGTATCTACTATCTTTTAGTACATGATA
TGTGCTGGGCACTCTGTGTCTGAGTGTAGTGAGTGCTTAAGTTTACATAGTTCAGCTAACATGC
ATATGTAAGACAGTTTATGATTAAATTTAAGTGTAGAAAGAAGGTACTTTCAAAAGATTTTTAA
GGACAATATAATTGTTTCACCGGGACTCATGCTTGTTCTGACTGTGAGCCTAATGTTACCTTTA
CATGCCCTTACATTGTCTATTTTTTATCGTTTTATGAGATCTTCCAAACAACTTGATCTGTCTT
AATGTTTTTTTGCTAGCTCCTTTCTTGGATATCTGGTAAATGGTTAGGCCGAAGTATGAACTTT
GCCTTATTGTTTCAAAGAAAATGTAACAACTCCTGGAAAAGTCTAATTTTGGTTGCCCTTTATT
TTGCTGACCGTATTGGCACACATCTAATTCTGCTGTTCCTTTCTGGCAGGTTCTTATGAACTTA
GCAAATGACAACCCATCTGGTTGTGAATTGATTGCGTCATGTGGTGGACTTAACACCATGGCCT
CCTTGATCATGAAGCATTTCCCCTCATTTTGTTTTGTCGTGGACAACAACTATAACACGAGAGA
TGTCAATCTTGATCATGAGTTATCATCTTCTCAAAACAGCAAGGCACACCAGGTCAAAATTAAG
CAATTGCGAGATCATGAACTTGATTTTCTGGTTGCCATATTGGGCTTGCTTGTTAACCTTGTAG
AGAAGGATAGCCTTAATAGGTAAGTCCCTCACATGCTTCCTTCCATTTGCTCAATTCATATCAG
TGTTACTGTTCTGGCAGTTCCTTGGGGTCAGGACTCAGAAACATCCAATTAATGTTCATGTTCT
CTTAACGACTCAGAAATACTTTATAACCTCTCCACAGGGTACGGCTTTCATCTGCCCGTGTTCC
TGTTGATCTATCTCAGAATCCACAGAGTGAAGAGACACAGAGAGATGTCATAGCACTCCTCTGT
TCTGTATTCTTAGCAAGTCAAGGTGCTAGTGAAGCTTCTGGAACTATATCACCGGTAATTCAAA
ATTCTTCAAGTTCCTTTTGTATGTAGATTATATCTTTGTAAAACTCGGCATTTATTACCTGCTC
TTTGTTTCAAAAAGCAGTATTTTATTTTGCTCCTTAGCATAGGTCAGCAGAACAGTTGATCTTA
TTCAGAAAACAATATTTTGCATGTAACATACTGTTATCTATGAGATGAAAATTAATGCATGTGT
AATAATGTCAATGATAAATATTTGCTATCTGAATCCAGTCTACCAACTCTAGTTAGACCGAAAT
TACTGAGGTTCTATTTCAAAGAATAATTTAGTGCACCATTTGTTCAACTACTATGAAGTAAAAT
GGTATTCCCTTCTATTGACATCGGGTTAGAAGTGAAAGGCCATCTTAATGCAATGTTCTCAATG
CCACAAACCCACAAATTTCATTAACACATACAGATTATTATTAACATAGCTATAAATTGGATTT
CCAGAAGCTTGAGTTGAATTTATTTTGTTACAATTGAAAGCACTGGGAACATTAGCATTTTTTT
TTAGTTCTTGGTTATTGCAATTTATAATGTTATACAGAACTGTGTACCTCACAATGCATTCATT
ATGACATTCTATGAACCATTTGATTGACTGTTGCTTGTAAACAACAGGATGATGAGGAGTCTTT
GATGCAAGGAGCACGGGAAGCTGAAATGATGATCGTAGAGGCCTATGCAGCCCTTCTTCTTGCG
TTTCTTTCAACTGAAAGGTTTGCAATCTGTAGTTGATGGATTGTTTTATTAATGTCTAACTACT
TGCATAATGTCAGCACTATGGCATTTAACTTATACTGTCTGTTAACTGCAACAGCATGAAGGTT
CGTGGAGCCATTTCCAGCTGCCTTCCAAATAACAGCTTAAAAATCCTTGTGCCTGCGCTAGAGA
AATTTGTG
						
					

			
		

Sequences
Splice junction sequence	GTCTGTTAACTGCAACAGCATGAAGGTTCGTGGAGCCATTTCCAGCTGCCTTCCAAATAACAGC TTAAAAATCCTTGTGCCTGCGCTAGAGAAATTTGTGaatctcataaaggatacctcaacttcag ctttggacctaaatgaaggaacatctttgcaaagtgccgctctcctcttgaaatgtttgaaaat attggaaa
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	AATCTCATAAAGGATACCTCAACTTCAGCTTTGGACCTAAATGAAGGAACATCTTTGCAAAGTG CCGCTCTCCTCTTGAAATGTTTGAAAATATTGGAAAATGCCACATTTCTAAGCGATGATAACAA GGTAATGTTCCTTATATATTCTGTTTCAGTTTAGTACCCATTTTCTTCTTCTGTACCATCTTCT CCCCTCATTTGTTCTGTGCAAAATGTGCAAACAGTGTGACTTTGTATTTCTGCTTAACATTTTT CTTTTTTTCCTGAAAAGCAGTATAAACTCTTACACTCATTTTGCTTCTTGCAGACCCATTTGCT TAATATGAGTAGAAAATTGTACCCGAAACGCTCCTCGCTTTCTTTTGTTGGTGTCATTATCAGT ATTATTGAGTTATTATCAGGTATTTTTCTTAATAATACAATATGTCCGCTAACACAATAAAATG TTTTAAACATCCAGTATGTTAAAGTTGCAGTCTGACGCCTATTTTGTTTTGCTGCAGCTCTTTC AATACTGCAGAATTCTTCTGTTGTTTCCAGCTCTACATATCCGAAATCGTCTAAAGTCTCTCAA CAGAGTTGCTCTGGTAATAACAAACACCAAATTTGTTTGATCAACTCGTTGGCTTTTCTGTGCA CTGTTTCAATATAGTTTGGTCGCCATTCAAGTCTCACTACAGATGTTGAACTTGACCTGACACG GTGGCACCAATATTTATAAAACGCTACCTGATATTTTTAATATTTCATGTTTCCTGACCCAGAT TATCTTGTTGGTTCCTCATATAAGTTTAATTAGTGTCGTTCTTGAAACTTTGTTATGCAGCAGA TGTCATGGGGGGAACTTCATTTAATGATGGAAAGCGCAAGAACTCGAAGAAAAAAAACCTTTTG TCGAACCAGACACGCCATAGTTGCTTATCTTCAAAATCAGAAGTTTCTCATATTACTATATCTT CTGGTAGTGATGCTGGTCTGTCACAGAAGGCATTCAATTGTTCTCCATCTATATCAAGCAATGG GGCATCAAGTGGTTCATTAGGCGAGAGACATAGCAATGGTGGTGCTTTGAAGTTGAATATAAAA AAGGATCGTGGCAATGCAAATCCAATTAGAGGCTCAAGTGGGTGGATTTCAATAAGAGCGCACA GTTCTGATGGGAACTCCAGAGAAATGGCAAAAAGACGCCGTCTATCTGAAAATGTAATCACCGA CAGTGGTGGCGGTGATGACCCTTTTGCTTTTGATGATGTTGATCAGGAGCCTTCAAATTGGGAA CTGCTTGGTCCAAAAAAGAAATCGCCTCAGAAACATCAAGACAAATCAGGAAATGGAGTGCTAG TTGCAAGTCATGAACCAGACCAACCTGAAGATCTTAATCAGTCGGGTACAACATCTCTTTTTAG TGCTAAAGATGAATCCAGTCTTTTGGAAGACTGCCTCTTGGCATCAGTTAAGGTAATTAAATAT GTTTCCTTCTGATCTTTCTTGTTTCTTCTTCAAGAGAATATACATTCTTGGGTCACAGTTTCTC GGTTTGTCTTTGTGACTTTGTTGAGTGACATATTTTGAATTCACAAAATTTCCTTTTCAATATG GCTCCTCAATCTATAGCATCTGTCGTGTATGTATTCTGTACAAAATAGTATTGTAACATCTCCT AGAAGAAATTGGCACCATCCATATCATACAGTAGCAATTTATGAGACGTGATCCTGATTGGAGG TTTAGGACAGAGCCTCGAGCTAAATTGCTATTGTATTGTATCTACTATCTTTTAGTACATGATA TGTGCTGGGCACTCTGTGTCTGAGTGTAGTGAGTGCTTAAGTTTACATAGTTCAGCTAACATGC ATATGTAAGACAGTTTATGATTAAATTTAAGTGTAGAAAGAAGGTACTTTCAAAAGATTTTTAA GGACAATATAATTGTTTCACCGGGACTCATGCTTGTTCTGACTGTGAGCCTAATGTTACCTTTA CATGCCCTTACATTGTCTATTTTTTATCGTTTTATGAGATCTTCCAAACAACTTGATCTGTCTT AATGTTTTTTTGCTAGCTCCTTTCTTGGATATCTGGTAAATGGTTAGGCCGAAGTATGAACTTT GCCTTATTGTTTCAAAGAAAATGTAACAACTCCTGGAAAAGTCTAATTTTGGTTGCCCTTTATT TTGCTGACCGTATTGGCACACATCTAATTCTGCTGTTCCTTTCTGGCAGGTTCTTATGAACTTA GCAAATGACAACCCATCTGGTTGTGAATTGATTGCGTCATGTGGTGGACTTAACACCATGGCCT CCTTGATCATGAAGCATTTCCCCTCATTTTGTTTTGTCGTGGACAACAACTATAACACGAGAGA TGTCAATCTTGATCATGAGTTATCATCTTCTCAAAACAGCAAGGCACACCAGGTCAAAATTAAG CAATTGCGAGATCATGAACTTGATTTTCTGGTTGCCATATTGGGCTTGCTTGTTAACCTTGTAG AGAAGGATAGCCTTAATAGGTAAGTCCCTCACATGCTTCCTTCCATTTGCTCAATTCATATCAG TGTTACTGTTCTGGCAGTTCCTTGGGGTCAGGACTCAGAAACATCCAATTAATGTTCATGTTCT CTTAACGACTCAGAAATACTTTATAACCTCTCCACAGGGTACGGCTTTCATCTGCCCGTGTTCC TGTTGATCTATCTCAGAATCCACAGAGTGAAGAGACACAGAGAGATGTCATAGCACTCCTCTGT TCTGTATTCTTAGCAAGTCAAGGTGCTAGTGAAGCTTCTGGAACTATATCACCGGTAATTCAAA ATTCTTCAAGTTCCTTTTGTATGTAGATTATATCTTTGTAAAACTCGGCATTTATTACCTGCTC TTTGTTTCAAAAAGCAGTATTTTATTTTGCTCCTTAGCATAGGTCAGCAGAACAGTTGATCTTA TTCAGAAAACAATATTTTGCATGTAACATACTGTTATCTATGAGATGAAAATTAATGCATGTGT AATAATGTCAATGATAAATATTTGCTATCTGAATCCAGTCTACCAACTCTAGTTAGACCGAAAT TACTGAGGTTCTATTTCAAAGAATAATTTAGTGCACCATTTGTTCAACTACTATGAAGTAAAAT GGTATTCCCTTCTATTGACATCGGGTTAGAAGTGAAAGGCCATCTTAATGCAATGTTCTCAATG CCACAAACCCACAAATTTCATTAACACATACAGATTATTATTAACATAGCTATAAATTGGATTT CCAGAAGCTTGAGTTGAATTTATTTTGTTACAATTGAAAGCACTGGGAACATTAGCATTTTTTT TTAGTTCTTGGTTATTGCAATTTATAATGTTATACAGAACTGTGTACCTCACAATGCATTCATT ATGACATTCTATGAACCATTTGATTGACTGTTGCTTGTAAACAACAGGATGATGAGGAGTCTTT GATGCAAGGAGCACGGGAAGCTGAAATGATGATCGTAGAGGCCTATGCAGCCCTTCTTCTTGCG TTTCTTTCAACTGAAAGGTTTGCAATCTGTAGTTGATGGATTGTTTTATTAATGTCTAACTACT TGCATAATGTCAGCACTATGGCATTTAACTTATACTGTCTGTTAACTGCAACAGCATGAAGGTT CGTGGAGCCATTTCCAGCTGCCTTCCAAATAACAGCTTAAAAATCCTTGTGCCTGCGCTAGAGA AATTTGTG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.223850233

Conservation Information
Conserved circRNAs	NA
PMCS	0.223850233

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							18910744-18914135(+)
18910797-18913919(-)
						
					

						Potential amino acid sequence
						
							MSRKLYPKRSSLSFVGVIISIIELLSALSILQNSSVVSSSTYPKSSKVSQQSCSDVMGGTSFND
GKRKNSKKKNLLSNQTRHSCLSSKSEVSHITISSGSDAGLSQKAFNCSPSISSNGASSGSLGER
HSNGGALKLNIKKDRGNANPIRGSSGWISIRAHSSDGNSREMAKRRRLSENVITDSGGGDDPFA
FDDVDQEPSNWELLGPKKKSPQKHQDKSGNGVLVASHEPDQPEDLNQSGTTSLFSAKDESSLLE
DCLLASVKVLMNLANDNPSGCELIASCGGLNTMASLIMKHFPSFCFVVDNNYNTRDVNLDHELS
SSQNSKAHQVKIKQLRDHELDFLVAILGLLVNLVEKDSLNRVRLSSARVPVDLSQNPQSEETQR
DVIALLCSVFLASQGASEASGTISPDDEESLMQGAREAEMMIVEAYAALLLAFLSTESMKVRGA
ISSCLPNNSLKILVPALEKFVNLIKDTSTSALDLNEGTSLQSAALLLKCLKILENATFLSDDNK
THLLNMSRKLYPKRSSLSFVGVIISIIELLSALSILQNSSVVSSSTYPKSSKVSQQSCSDVMGG
TSFNDGKRKNSKKKNLLSNQTRHSCLSSKSEVSHITISSGSDAGLSQKAFNCSPSISSNGASSG
SLGERHSNGGALKLNIKKDRGNANPIRGSSGWISIRAHSSDGNSREMAKRRRLSENVITDSGGG
DDPFAFDDVDQEPSNWELLGPKKKSPQKHQDKSGNGVLVASHEPDQPEDLNQSGTTSLFSAKDE
SSLLEDCLLASVKVLMNLANDNPSGCELIASCGGLNTMASLIMKHFPSFCFVVDNNYNTRDVNL
DHELSSSQNSKAHQVKIKQLRDHELDFLVAILGLLVNLVEKDSLNRVRLSSARVPVDLSQNPQS
EETQRDVIALLCSVFLASQGASEASGTISPDDEESLMQGAREAEMMIVEAYAALLLAFLSTESM
KVRGAISSCLPNNSLKILVPALEKFVNLIKDTSTSALDLNEGTSLQSAALLLKCLKILENATFL
SDDNKTHLLNMSRKLYPKRSSLSFVGVIISIIELLSALSILQNSSVVSSSTYPKSSKVSQQSCS
DVMGGTSFNDGKRKNSKKKNLLSNQTRHSCLSSKSEVSHITISSGSDAGLSQKAFNCSPSISSN
GASSGSLGERHSNGGALKLNIKKDRGNANPIRGSSGWISIRAHSSDGNSREMAKRRRLSENVIT
DSGGGDDPFAFDDVDQEPSNWELLGPKKKSPQKHQDKSGNGVLVASHEPDQPEDLNQSGTTSLF
SAKDESSLLEDCLLASVKVLMNLANDNPSGCELIASCGGLNTMASLIMKHFPSFCFVVDNNYNT
RDVNLDHELSSSQNSKAHQVKIKQLRDHELDFLVAILGLLVNLVEKDSLNRVRLSSARVPVDLS
QNPQSEETQRDVIALLCSVFLASQGASEASGTISPDDEESLMQGAREAEMMIVEAYAALLLAFL
STESMKVRGAISSCLPNNSLKILVPALEKFVNLIKDTSTSALDLNEGTSLQSAALLLKCLKILE
NATFLSDDNKTHLLNMSRKLYPKRSSLSFVGVIISIIELLSALSILQNSSVVSSSTYPKSSKVS
QQSCSDVMGGTSFNDGKRKNSKKKNLLSNQTRHSCLSSKSEVSHITISSGSDAGLSQKAFNCSP
SISSNGASSGSLGERHSNGGALKLNIKKDRGNANPIRGSSGWISIRAHSSDGNSREMAKRRRLS
ENVITDSGGGDDPFAFDDVDQEPSNWELLGPKKKSPQKHQDKSGNGVLVASHEPDQPEDLNQSG
TTSLFSAKDESSLLEDCLLASVKVLMNLANDNPSGCELIASCGGLNTMASLIMKHFPSFCFVVD
NNYNTRDVNLDHELSSSQNSKAHQVKIKQLRDHELDFLVAILGLLVNLVEKDSLNRVRLSSARV
PVDLSQNPQSEETQRDVIALLCSVFLASQGASEASGTISPDDEESLMQGAREAEMMIVEAYAAL
LLAFLSTESMKVRGAISSCLPNNSLKILVPALEKFV(+)
MTPTKESEERFGYNFLLILSKWVLLSSLRNVAFSNIFKHFKRRAALCKDVPSFRSKAEVEVSFM
RFTNFSSAGTRIFKLLFGRQLEMAPRTFMLSVERNARRRAA*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	18910744-18914135(+) 18910797-18913919(-)
Potential amino acid sequence	MSRKLYPKRSSLSFVGVIISIIELLSALSILQNSSVVSSSTYPKSSKVSQQSCSDVMGGTSFND GKRKNSKKKNLLSNQTRHSCLSSKSEVSHITISSGSDAGLSQKAFNCSPSISSNGASSGSLGER HSNGGALKLNIKKDRGNANPIRGSSGWISIRAHSSDGNSREMAKRRRLSENVITDSGGGDDPFA FDDVDQEPSNWELLGPKKKSPQKHQDKSGNGVLVASHEPDQPEDLNQSGTTSLFSAKDESSLLE DCLLASVKVLMNLANDNPSGCELIASCGGLNTMASLIMKHFPSFCFVVDNNYNTRDVNLDHELS SSQNSKAHQVKIKQLRDHELDFLVAILGLLVNLVEKDSLNRVRLSSARVPVDLSQNPQSEETQR DVIALLCSVFLASQGASEASGTISPDDEESLMQGAREAEMMIVEAYAALLLAFLSTESMKVRGA ISSCLPNNSLKILVPALEKFVNLIKDTSTSALDLNEGTSLQSAALLLKCLKILENATFLSDDNK THLLNMSRKLYPKRSSLSFVGVIISIIELLSALSILQNSSVVSSSTYPKSSKVSQQSCSDVMGG TSFNDGKRKNSKKKNLLSNQTRHSCLSSKSEVSHITISSGSDAGLSQKAFNCSPSISSNGASSG SLGERHSNGGALKLNIKKDRGNANPIRGSSGWISIRAHSSDGNSREMAKRRRLSENVITDSGGG DDPFAFDDVDQEPSNWELLGPKKKSPQKHQDKSGNGVLVASHEPDQPEDLNQSGTTSLFSAKDE SSLLEDCLLASVKVLMNLANDNPSGCELIASCGGLNTMASLIMKHFPSFCFVVDNNYNTRDVNL DHELSSSQNSKAHQVKIKQLRDHELDFLVAILGLLVNLVEKDSLNRVRLSSARVPVDLSQNPQS EETQRDVIALLCSVFLASQGASEASGTISPDDEESLMQGAREAEMMIVEAYAALLLAFLSTESM KVRGAISSCLPNNSLKILVPALEKFVNLIKDTSTSALDLNEGTSLQSAALLLKCLKILENATFL SDDNKTHLLNMSRKLYPKRSSLSFVGVIISIIELLSALSILQNSSVVSSSTYPKSSKVSQQSCS DVMGGTSFNDGKRKNSKKKNLLSNQTRHSCLSSKSEVSHITISSGSDAGLSQKAFNCSPSISSN GASSGSLGERHSNGGALKLNIKKDRGNANPIRGSSGWISIRAHSSDGNSREMAKRRRLSENVIT DSGGGDDPFAFDDVDQEPSNWELLGPKKKSPQKHQDKSGNGVLVASHEPDQPEDLNQSGTTSLF SAKDESSLLEDCLLASVKVLMNLANDNPSGCELIASCGGLNTMASLIMKHFPSFCFVVDNNYNT RDVNLDHELSSSQNSKAHQVKIKQLRDHELDFLVAILGLLVNLVEKDSLNRVRLSSARVPVDLS QNPQSEETQRDVIALLCSVFLASQGASEASGTISPDDEESLMQGAREAEMMIVEAYAALLLAFL STESMKVRGAISSCLPNNSLKILVPALEKFVNLIKDTSTSALDLNEGTSLQSAALLLKCLKILE NATFLSDDNKTHLLNMSRKLYPKRSSLSFVGVIISIIELLSALSILQNSSVVSSSTYPKSSKVS QQSCSDVMGGTSFNDGKRKNSKKKNLLSNQTRHSCLSSKSEVSHITISSGSDAGLSQKAFNCSP SISSNGASSGSLGERHSNGGALKLNIKKDRGNANPIRGSSGWISIRAHSSDGNSREMAKRRRLS ENVITDSGGGDDPFAFDDVDQEPSNWELLGPKKKSPQKHQDKSGNGVLVASHEPDQPEDLNQSG TTSLFSAKDESSLLEDCLLASVKVLMNLANDNPSGCELIASCGGLNTMASLIMKHFPSFCFVVD NNYNTRDVNLDHELSSSQNSKAHQVKIKQLRDHELDFLVAILGLLVNLVEKDSLNRVRLSSARV PVDLSQNPQSEETQRDVIALLCSVFLASQGASEASGTISPDDEESLMQGAREAEMMIVEAYAAL LLAFLSTESMKVRGAISSCLPNNSLKILVPALEKFV(+) MTPTKESEERFGYNFLLILSKWVLLSSLRNVAFSNIFKHFKRRAALCKDVPSFRSKAEVEVSFM RFTNFSSAGTRIFKLLFGRQLEMAPRTFMLSVERNARRRAA*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os10g0497000_circ_g.1

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