Plant Circular RNA Database

Detail information of Os05g0402800_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os05g0402800_circ_g.2
					
						ID in PlantcircBase
						osa_circ_027827
					
						Alias
						Os_ciR9880
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr5: 19611894-19616318  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, find_circ
					
						Parent gene
						
							Os05g0402800						
					
						Parent gene annotation
						
							Similar to p-type ATPase transporter. (Os05t0402800-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os05g0402800_circ_ag.1 Os05g0402800_circ_g.2 Os05g0402800_circ_g.3 Os05g0402800_circ_ag.4 Os05g0402800_circ_ag.5 Os05g0402851_circ_g.1 						
					
						Support reads
						2/1
					
						Tissues
						root/root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os05t0402800-01:6

General Information
CircRNA Name	Os05g0402800_circ_g.2
ID in PlantcircBase	osa_circ_027827
Alias	Os_ciR9880
Organism	Oryza sativa
Position	chr5: 19611894-19616318 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, find_circ
Parent gene	Os05g0402800
Parent gene annotation	Similar to p-type ATPase transporter. (Os05t0402800-01)
Parent gene strand	-
Alternative splicing	Os05g0402800_circ_ag.1 Os05g0402800_circ_g.2 Os05g0402800_circ_g.3 Os05g0402800_circ_ag.4 Os05g0402800_circ_ag.5 Os05g0402851_circ_g.1
Support reads	2/1
Tissues	root/root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os05t0402800-01:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GGGCCAGGACTCGGGACCCCTGTCGAGTGTATTTTTTGTATGTCTCCACATATCCAGCGGGTAA
ATCAACTAACCTCTCCTGAATGGTCTCTGGTGCACCctgttttagtgcaccaacatcattggtt
ccatccccacacatcagtgtaaccctcccaacagttttgaatgtagtcagaacaagttctttct
gttctgga

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 645
Transcript exons: 19611894-19612010,19612413-19612524,19613264-19613412,19
613623-19613694,19613789-19613854,19616190-19616318
CTGTTTTAGTGCACCAACATCATTGGTTCCATCCCCACACATCAGTGTAACCCTCCCAACAGTT
TTGAATGTAGTCAGAACAAGTTCTTTCTGTTCTGGAGCAACACGTGCAAAAACCTTCACATATG
GAATGACTTGGATAACAGCATCAGTTCTTTGTAGCATTTCAAAGCAGTCTCCACTGATGCAGAG
ATCATGCGATCCAGACACCGCGGCAACCTCCTCAGCGCTGTATGGAGCTCTGTCGGTTTCATCA
GGGGAAACCCACTCAAAACCACCAGTCTTTGTACGTGTCAAAATTAAAACAGGTTTGGAACAAA
TATGCACTTGGCCAGCAACATGGCAAGCAGTCAAAGCTTGGTCCCCAGTGATCATAACCAAGTC
ATGGGAAGATTGCTCCAGTTCTTGTAAGACAGCACCGGAGTCACTCCTTATAGGACAGTTGAAA
ACCGCAAAACCTGCAAAAGTTAGGTCACTCTCTACTTGATCCCTTTCCAAACTTCTAGCTTCAT
TTACAGGCATATCCGGAAGCAATTTGTATGCAAGGGCCAGGACTCGGGACCCCTGTCGAGTGTA
TTTTTTGTATGTCTCCACATATCCAGCGGGTAAATCAACTAACCTCTCCTGAATGGTCTCTGGT
GCACC
						
					

						Genomic sequence
						
							CTGTTTTAGTGCACCAACATCATTGGTTCCATCCCCACACATCAGTGTAACCCTCCCAACAGTT
TTGAATGTAGTCAGAACAAGTTCTTTCTGTTCTGGAGCAACACGTGCAAAAACCTGAAAATACA
ACACATACAAAATAAACAATGGGAATAAGGATTCAATATACTTTTAACTGTTTTTTATAGTACC
CTAGGATAAACCTTGGTCCATCCATTGCATTTGACCTAATGGATAAGATTCTATGGTACTGAAC
CTGGTAGTATGGACAGCAGATATTTTGGTTCCATCCCCAAAATTGGAATAAAAGTGCATGTTGG
TTGATAGATAGATTCAGATGTCAAATGGCATGTGATGCGACGACAGGTGAATGGTCAAAATTAC
CTTGCTAAACCTCTACTGAAATGTTCTAAGTACACATGAAAATCAACTGATAGATTTAGACCCT
ACTAGCATACTAACGCCGGTAGTAGAAGATACCGTAAAAGCACCAAAAAGATGTAATCTGTTCT
CAGATACCTTCACATATGGAATGACTTGGATAACAGCATCAGTTCTTTGTAGCATTTCAAAGCA
GTCTCCACTGATGCAGAGATCATGCGATCCAGACACCGCGGCAACCTCCTCAGCGCTACAAAAT
ATTAATGCAGCACATTAGGCATAGTATTAAAGAAGATACACGTTCCACACAGTCATCATGATGG
CAGAGATGTAAAATAATGGATGTAGTTGCTCTATGTCTGTGTAATGAAAGTGAATTTGGAATAA
CAATTAAATTATATATTAATCACTAATCAGGAAAAGAAACCATATTCACTGCTTATCATTTTCC
AAATTCTAGGAATTTCTTTCCTAACAACAGTGTTTGTGCCATAGATAAAAGAAGAAGAAATGTG
AATATTCGTCAGCTTGTTTCTTTTCAGCAGTTGTAACAGCATCTTGGACGCCTCGTTTTCTTCT
ATTAATGCAATGATACGCAGCTCTCATGCGTATTCTAGGAAAAAAATAATATTCACCAGCACAA
ATAGGAAGACTCATTTTTTCACTGAAAAGAAACAACAGTTGTACAAAAGAATCTTTGGAAAGTA
CTCCCTCTGTTTTTTAATAGATGACACCATTGACTTTTAGAATAACGTTTGCACTAAATTTTGA
ATAACTCGTATTTAAAGTTTCTTCAATAACAAAACAAGTCACAACAAAATAAATAACATTTATA
TAATTTTTTTGAATAAGACGAATGGTCAAACGTCATACAAAAGTCAATGGCGTCATCTACGGAG
TTTTAAAAAATGGAGTATGTATTAACTAAAAAGTATGAAATGTTTGCTAAAAATGCTTAGTAGT
ATAGAGCAGACCCTTGCATATCTTACCTGTATGGAGCTCTGTCGGTTTCATCAGGGGAAACCCA
CTCAAAACCACCAGTCTTTGTACGTGTCAAAATTAAAACAGGTTTGGAACAAATATGCACTTGG
CCAGCAACATGGCAAGCAGTCAAAGCTTGGTCCCCAGTGATCATAACCTAAGAATACATCAGGG
AGGTGGTAAGAACTTTAATCACAAATGGAAATTTTCCAGTGCATTGGCCGATGCATAGTGTATA
ATAAAGATCATATAGAAACTGGTCCACAAAAATCCTTCAACAAGGTAATATTGCACAATGCATG
GAGATGTCACTATATCGCACCCTTGTAATTTGATGAATGGACACAAGATGAATAAGAGTACATA
CCAAGTCATGGGAAGATTGCTCCAGTTCTTGTAAGACAGCACCGGAGTCACTCCTTATAGGACA
GTTGAAAACCTAAGCCCACAAAACCCCATTACCATAAAAGAGCACATCAACAAACTTGAGAAAT
TATAAAATTTATGGATGGGAGTGGGGGAGGGTGGTTTACCGCAAAACCTGCAAAAGTTAGGTCA
CTCTCTACTTGATCCCTTTCCAAACTTCTAGCTTCATTTACCTGTCATTCAAATACCAAGAGAC
CAAACAATTCAAACTAGATATAGGGTTGCTTCTGAAAAATACAAAATAAACAAATAAACTGCAA
CTACTTTGTAAAGTTCAAGGGTATACATTAAGTGATGAATATCACATACATTTGAAGAGACTTG
GGTAATTTATTAAAAATAGTGTGGAACGACTAATGATGAGATTGAGGACAGTTCAAATTTTGCA
ATATCTCCTGAAGTGTAAGCAGTGAATAAATAATGACTATTTTCTGGATGCAGAAGTTGTGGAT
CATAGACAAATATCATTATAAATGTCTAGATGTTTCTTCTGAACCTAGGATTCTCCAAATCAGA
ACACTATGTTCTTTGCCTCTAGCATATCCCACATTGCCCTGACAATCCATTATTTGTCTTCCTA
AAAAATGTATTTCCTCCAGTACAAATAGATGATGCTTTTAGCAAGCAGGTTTTGGTTTGCAAAC
ATTTGCCATTTAGCAGTGTTGTGGAAGTCAGTCACCATGACTGTTTAGTCAGCTGTCTAAATGG
AAACGTTAGCCAAACTGTATCGTATCATTGAACCGGTGTGCCAGTAATGTTTCAGAGCAATTAT
GCAGCCAAATGGCATTATTAATTGGTCATTTTCAGTCTAATCAGGAGCTATAGCTTTTCTATTA
AACTAATGTAGACTTGCAGTCCAGTTGCACAATTGCACTCGTTTCATGGACAAGCCTGGTGGTA
TTAATGCATTAACATTGGTATTCTTTCAGCAAATAATGATGTTTTCATGATACATTCAGAAAAA
TGTACAGATATTTGATTAAGGTTCTATATGTCCTCTCTACTATTGTCATTAACACCTAATGTAT
ATGCTAGTGTGAACGACAAAAATCTGTACAATTCCGCTTAATCATCTGTATTCCCACTAATAAC
TTGGCGGCACCTTGTCGGTCCGACACCCATATTCTGTCTTTTGCAACACTGCCATCTAGATGTT
TCAAGGCAGTATTTTCCACCAAATTCCCCTGTAAAATGCTACATGGTATTTTGCACCATTGTAA
GAGCATTTTCATGGACATATCCAAGCAAATCCACCTAGGATGAATGTTGTAATGAATAGTGGAT
GCATTCAACATGAGGGCTCTAGGCCTACAAGATCGAGAGTCCTGGATGAATACTAGACAAAAGT
AAGAGACCTGACATAAATTCCTACACCTTAACAAAGGTTGAGAAGAGTTAAGGAAGGGTAAGGA
ATGGTAGTTTTAGATAACTATAAGTTGGTGCAGATACAAAACTTTTGAATAAGAACCACAAAAT
ATGGAGAGAGGGTCTGTCTGGCAAACGGGTCAGGTCTATTGGAGAGGGATTGTTAGATATGTAG
TATTAGGTTGGTTTGATGGGAATTTGGATACTTATCTTAGGACGATCTGTTTCTAGGACACAGA
TTATTTCTTAGGGGGGGTCAAGTAGAGTCATCCATATAGAAGGGGACTGCACTATCTTCTTGAA
TGAACCAAAGATAATAAACAAGTCCCTAGTCCCTAAACTTCAGTTGCGATCATGGACCAGCAAT
TCTAGATTTGTTCCCCAACTCAGTGCCCTCCTTCACCCGTCACCGTTCTAACTCAAGTTTCCAT
CATCAAACCTCCCTCTGAAAGATGTCATTAGATGACATGTAGTAGTTATATGCATGTGTAGTGA
TATTACTTTGCTTTTAGACCCAACTCATTGGTAATGCATGCAGCCCGAATGCCCTTAGGCCTTA
GGGAATTCTTCATTTCAGCAAACATTCCTTGTAAAGGTGCTAAAACATGTCAGGTAAAGAACCT
ATCAGTACCAATTCGAGCAAACATAAGATTCATAGGACTCCAGTGACCTTTGCTAATACAAGGA
TACAAAGACAAGCTGTAGAATATAGTCAGACTATCTTTTACTAAACTAGAATTCTATGTATAGC
TGGAATTTATCAGCTCTTATACATCAGGTTAAAAGAAAAGGTTTACTCTTTAGTTAAAATGTCC
TTGCTATGTTGCAGATCAGGAACTTTCTGGAAGACTGCTAACAGAGAGTATAAAAGAACCTAGT
GGTAGTGGTGAATCTGCCATTACTTAGTGGCTGGGATCTTCCAAGGATGGATAGTTTCTAAGTT
ATATGTCTTTTTTTATGTTTTGCTTGCAAGTTATGTGTCTTTTCGAATTTCAAACAAAGATATA
ATTTCTAAGTTAAGAAACTTAAGATATATTTTTTGAAATCTGTTGCAAGGCACAAATATTTTGC
TAGTACTAAGAAAAAAAATGATATGCCAAAATGCGCTGTTAATGAACCGAGAAATGTTAAATGC
TAACTTACAGGCATATCCGGAAGCAATTTGTATGCAAGGGCCAGGACTCGGGACCCCTGTCGAG
TGTATTTTTTGTATGTCTCCACATATCCAGCGGGTAAATCAACTAACCTCTCCTGAATGGTCTC
TGGTGCACC
						
					

			
		

Sequences
Splice junction sequence	GGGCCAGGACTCGGGACCCCTGTCGAGTGTATTTTTTGTATGTCTCCACATATCCAGCGGGTAA ATCAACTAACCTCTCCTGAATGGTCTCTGGTGCACCctgttttagtgcaccaacatcattggtt ccatccccacacatcagtgtaaccctcccaacagttttgaatgtagtcagaacaagttctttct gttctgga
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 645 Transcript exons: 19611894-19612010,19612413-19612524,19613264-19613412,19 613623-19613694,19613789-19613854,19616190-19616318 CTGTTTTAGTGCACCAACATCATTGGTTCCATCCCCACACATCAGTGTAACCCTCCCAACAGTT TTGAATGTAGTCAGAACAAGTTCTTTCTGTTCTGGAGCAACACGTGCAAAAACCTTCACATATG GAATGACTTGGATAACAGCATCAGTTCTTTGTAGCATTTCAAAGCAGTCTCCACTGATGCAGAG ATCATGCGATCCAGACACCGCGGCAACCTCCTCAGCGCTGTATGGAGCTCTGTCGGTTTCATCA GGGGAAACCCACTCAAAACCACCAGTCTTTGTACGTGTCAAAATTAAAACAGGTTTGGAACAAA TATGCACTTGGCCAGCAACATGGCAAGCAGTCAAAGCTTGGTCCCCAGTGATCATAACCAAGTC ATGGGAAGATTGCTCCAGTTCTTGTAAGACAGCACCGGAGTCACTCCTTATAGGACAGTTGAAA ACCGCAAAACCTGCAAAAGTTAGGTCACTCTCTACTTGATCCCTTTCCAAACTTCTAGCTTCAT TTACAGGCATATCCGGAAGCAATTTGTATGCAAGGGCCAGGACTCGGGACCCCTGTCGAGTGTA TTTTTTGTATGTCTCCACATATCCAGCGGGTAAATCAACTAACCTCTCCTGAATGGTCTCTGGT GCACC
Genomic sequence	CTGTTTTAGTGCACCAACATCATTGGTTCCATCCCCACACATCAGTGTAACCCTCCCAACAGTT TTGAATGTAGTCAGAACAAGTTCTTTCTGTTCTGGAGCAACACGTGCAAAAACCTGAAAATACA ACACATACAAAATAAACAATGGGAATAAGGATTCAATATACTTTTAACTGTTTTTTATAGTACC CTAGGATAAACCTTGGTCCATCCATTGCATTTGACCTAATGGATAAGATTCTATGGTACTGAAC CTGGTAGTATGGACAGCAGATATTTTGGTTCCATCCCCAAAATTGGAATAAAAGTGCATGTTGG TTGATAGATAGATTCAGATGTCAAATGGCATGTGATGCGACGACAGGTGAATGGTCAAAATTAC CTTGCTAAACCTCTACTGAAATGTTCTAAGTACACATGAAAATCAACTGATAGATTTAGACCCT ACTAGCATACTAACGCCGGTAGTAGAAGATACCGTAAAAGCACCAAAAAGATGTAATCTGTTCT CAGATACCTTCACATATGGAATGACTTGGATAACAGCATCAGTTCTTTGTAGCATTTCAAAGCA GTCTCCACTGATGCAGAGATCATGCGATCCAGACACCGCGGCAACCTCCTCAGCGCTACAAAAT ATTAATGCAGCACATTAGGCATAGTATTAAAGAAGATACACGTTCCACACAGTCATCATGATGG CAGAGATGTAAAATAATGGATGTAGTTGCTCTATGTCTGTGTAATGAAAGTGAATTTGGAATAA CAATTAAATTATATATTAATCACTAATCAGGAAAAGAAACCATATTCACTGCTTATCATTTTCC AAATTCTAGGAATTTCTTTCCTAACAACAGTGTTTGTGCCATAGATAAAAGAAGAAGAAATGTG AATATTCGTCAGCTTGTTTCTTTTCAGCAGTTGTAACAGCATCTTGGACGCCTCGTTTTCTTCT ATTAATGCAATGATACGCAGCTCTCATGCGTATTCTAGGAAAAAAATAATATTCACCAGCACAA ATAGGAAGACTCATTTTTTCACTGAAAAGAAACAACAGTTGTACAAAAGAATCTTTGGAAAGTA CTCCCTCTGTTTTTTAATAGATGACACCATTGACTTTTAGAATAACGTTTGCACTAAATTTTGA ATAACTCGTATTTAAAGTTTCTTCAATAACAAAACAAGTCACAACAAAATAAATAACATTTATA TAATTTTTTTGAATAAGACGAATGGTCAAACGTCATACAAAAGTCAATGGCGTCATCTACGGAG TTTTAAAAAATGGAGTATGTATTAACTAAAAAGTATGAAATGTTTGCTAAAAATGCTTAGTAGT ATAGAGCAGACCCTTGCATATCTTACCTGTATGGAGCTCTGTCGGTTTCATCAGGGGAAACCCA CTCAAAACCACCAGTCTTTGTACGTGTCAAAATTAAAACAGGTTTGGAACAAATATGCACTTGG CCAGCAACATGGCAAGCAGTCAAAGCTTGGTCCCCAGTGATCATAACCTAAGAATACATCAGGG AGGTGGTAAGAACTTTAATCACAAATGGAAATTTTCCAGTGCATTGGCCGATGCATAGTGTATA ATAAAGATCATATAGAAACTGGTCCACAAAAATCCTTCAACAAGGTAATATTGCACAATGCATG GAGATGTCACTATATCGCACCCTTGTAATTTGATGAATGGACACAAGATGAATAAGAGTACATA CCAAGTCATGGGAAGATTGCTCCAGTTCTTGTAAGACAGCACCGGAGTCACTCCTTATAGGACA GTTGAAAACCTAAGCCCACAAAACCCCATTACCATAAAAGAGCACATCAACAAACTTGAGAAAT TATAAAATTTATGGATGGGAGTGGGGGAGGGTGGTTTACCGCAAAACCTGCAAAAGTTAGGTCA CTCTCTACTTGATCCCTTTCCAAACTTCTAGCTTCATTTACCTGTCATTCAAATACCAAGAGAC CAAACAATTCAAACTAGATATAGGGTTGCTTCTGAAAAATACAAAATAAACAAATAAACTGCAA CTACTTTGTAAAGTTCAAGGGTATACATTAAGTGATGAATATCACATACATTTGAAGAGACTTG GGTAATTTATTAAAAATAGTGTGGAACGACTAATGATGAGATTGAGGACAGTTCAAATTTTGCA ATATCTCCTGAAGTGTAAGCAGTGAATAAATAATGACTATTTTCTGGATGCAGAAGTTGTGGAT CATAGACAAATATCATTATAAATGTCTAGATGTTTCTTCTGAACCTAGGATTCTCCAAATCAGA ACACTATGTTCTTTGCCTCTAGCATATCCCACATTGCCCTGACAATCCATTATTTGTCTTCCTA AAAAATGTATTTCCTCCAGTACAAATAGATGATGCTTTTAGCAAGCAGGTTTTGGTTTGCAAAC ATTTGCCATTTAGCAGTGTTGTGGAAGTCAGTCACCATGACTGTTTAGTCAGCTGTCTAAATGG AAACGTTAGCCAAACTGTATCGTATCATTGAACCGGTGTGCCAGTAATGTTTCAGAGCAATTAT GCAGCCAAATGGCATTATTAATTGGTCATTTTCAGTCTAATCAGGAGCTATAGCTTTTCTATTA AACTAATGTAGACTTGCAGTCCAGTTGCACAATTGCACTCGTTTCATGGACAAGCCTGGTGGTA TTAATGCATTAACATTGGTATTCTTTCAGCAAATAATGATGTTTTCATGATACATTCAGAAAAA TGTACAGATATTTGATTAAGGTTCTATATGTCCTCTCTACTATTGTCATTAACACCTAATGTAT ATGCTAGTGTGAACGACAAAAATCTGTACAATTCCGCTTAATCATCTGTATTCCCACTAATAAC TTGGCGGCACCTTGTCGGTCCGACACCCATATTCTGTCTTTTGCAACACTGCCATCTAGATGTT TCAAGGCAGTATTTTCCACCAAATTCCCCTGTAAAATGCTACATGGTATTTTGCACCATTGTAA GAGCATTTTCATGGACATATCCAAGCAAATCCACCTAGGATGAATGTTGTAATGAATAGTGGAT GCATTCAACATGAGGGCTCTAGGCCTACAAGATCGAGAGTCCTGGATGAATACTAGACAAAAGT AAGAGACCTGACATAAATTCCTACACCTTAACAAAGGTTGAGAAGAGTTAAGGAAGGGTAAGGA ATGGTAGTTTTAGATAACTATAAGTTGGTGCAGATACAAAACTTTTGAATAAGAACCACAAAAT ATGGAGAGAGGGTCTGTCTGGCAAACGGGTCAGGTCTATTGGAGAGGGATTGTTAGATATGTAG TATTAGGTTGGTTTGATGGGAATTTGGATACTTATCTTAGGACGATCTGTTTCTAGGACACAGA TTATTTCTTAGGGGGGGTCAAGTAGAGTCATCCATATAGAAGGGGACTGCACTATCTTCTTGAA TGAACCAAAGATAATAAACAAGTCCCTAGTCCCTAAACTTCAGTTGCGATCATGGACCAGCAAT TCTAGATTTGTTCCCCAACTCAGTGCCCTCCTTCACCCGTCACCGTTCTAACTCAAGTTTCCAT CATCAAACCTCCCTCTGAAAGATGTCATTAGATGACATGTAGTAGTTATATGCATGTGTAGTGA TATTACTTTGCTTTTAGACCCAACTCATTGGTAATGCATGCAGCCCGAATGCCCTTAGGCCTTA GGGAATTCTTCATTTCAGCAAACATTCCTTGTAAAGGTGCTAAAACATGTCAGGTAAAGAACCT ATCAGTACCAATTCGAGCAAACATAAGATTCATAGGACTCCAGTGACCTTTGCTAATACAAGGA TACAAAGACAAGCTGTAGAATATAGTCAGACTATCTTTTACTAAACTAGAATTCTATGTATAGC TGGAATTTATCAGCTCTTATACATCAGGTTAAAAGAAAAGGTTTACTCTTTAGTTAAAATGTCC TTGCTATGTTGCAGATCAGGAACTTTCTGGAAGACTGCTAACAGAGAGTATAAAAGAACCTAGT GGTAGTGGTGAATCTGCCATTACTTAGTGGCTGGGATCTTCCAAGGATGGATAGTTTCTAAGTT ATATGTCTTTTTTTATGTTTTGCTTGCAAGTTATGTGTCTTTTCGAATTTCAAACAAAGATATA ATTTCTAAGTTAAGAAACTTAAGATATATTTTTTGAAATCTGTTGCAAGGCACAAATATTTTGC TAGTACTAAGAAAAAAAATGATATGCCAAAATGCGCTGTTAATGAACCGAGAAATGTTAAATGC TAACTTACAGGCATATCCGGAAGCAATTTGTATGCAAGGGCCAGGACTCGGGACCCCTGTCGAG TGTATTTTTTGTATGTCTCCACATATCCAGCGGGTAAATCAACTAACCTCTCCTGAATGGTCTC TGGTGCACC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.20442142

Conservation Information
Conserved circRNAs	NA
PMCS	0.20442142

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							19616303-19613822(+)
19616214-19611940(+)
19616197-19611896(-)
						
						Potential amino acid sequence
						
							MVSGAPCFSAPTSLVPSPHISVTLPTVLNVVRTSSFCSGATRAKTFTYGMTWITASVLCSISKQ
SPLMQRSCDPDTAATSSALYGALSVSSGETHSKPPVFVRVKIKTGLEQICTWPATWQAVKAWSP
VIITKSWEDCSSSCKTAPESLLIGQLKTAKPAKVRSLST*(+)
MQGPGLGTPVECIFCMSPHIQRVNQLTSPEWSLVHPVLVHQHHWFHPHTSV*(+)
MPVNEARSLERDQVESDLTFAGFAVFNCPIRSDSGAVLQELEQSSHDLVMITGDQALTACHVAG
QVHICSKPVLILTRTKTGGFEWVSPDETDRAPYSAEEVAAVSGSHDLCISGDCFEMLQRTDAVI
QVIPYVKVFARVAPEQKELVLTTFKTVGRVTLMCGDGTNDVGALKQGAPETIQERLVDLPAGYV
ETYKKYTRQGSRVLALAYKLLPDMPVNEARSLERDQVESDLTFAGFAVFNCPIRSDSGAVLQEL
EQSSHDLVMITGDQALTACHVAGQVHICSKPVLILTRTKTGGFEWVSPDETDRAPYSAEEVAAV
SGSHDLCISGDCFEMLQRTDAVIQVIPYVKVFARVAPEQKELVLTTFKTVGRVTLMCGDGTNDV
GALKQGAPETIQERLVDLPAGYVETYKKYTRQGSRVLALAYKLLPDMPVNEARSLERDQVESDL
TFAGFAVFNCPIRSDSGAVLQELEQSSHDLVMITGDQALTACHVAGQVHICSKPVLILTRTKTG
GFEWVSPDETDRAPYSAEEVAAVSGSHDLCISGDCFEMLQRTDAVIQVIPYVKVFARVAPEQKE
LVLTTFKTVGRVTLMCGDGTNDVGALKQGAPETIQERLVDLPAGYVETYKKYTRQGSRVLALAY
KLLPDMPVNEARSLERDQVESDLTFAGFAVFNCPIRSDSGAVLQELEQSSHDLVMITGDQALTA
CHVAGQVHICSKPVLILTRTKTGGFEWVSPDETDRAPYSAEEVAAVSGSHDLCISGDCFEMLQR
TDAVIQVIPYVKVFARVAPEQKELVLTTFKTVGRVTLMCGDGTNDVGALKQ(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	19616303-19613822(+) 19616214-19611940(+) 19616197-19611896(-)
Potential amino acid sequence	MVSGAPCFSAPTSLVPSPHISVTLPTVLNVVRTSSFCSGATRAKTFTYGMTWITASVLCSISKQ SPLMQRSCDPDTAATSSALYGALSVSSGETHSKPPVFVRVKIKTGLEQICTWPATWQAVKAWSP VIITKSWEDCSSSCKTAPESLLIGQLKTAKPAKVRSLST(+) MQGPGLGTPVECIFCMSPHIQRVNQLTSPEWSLVHPVLVHQHHWFHPHTSV(+) MPVNEARSLERDQVESDLTFAGFAVFNCPIRSDSGAVLQELEQSSHDLVMITGDQALTACHVAG QVHICSKPVLILTRTKTGGFEWVSPDETDRAPYSAEEVAAVSGSHDLCISGDCFEMLQRTDAVI QVIPYVKVFARVAPEQKELVLTTFKTVGRVTLMCGDGTNDVGALKQGAPETIQERLVDLPAGYV ETYKKYTRQGSRVLALAYKLLPDMPVNEARSLERDQVESDLTFAGFAVFNCPIRSDSGAVLQEL EQSSHDLVMITGDQALTACHVAGQVHICSKPVLILTRTKTGGFEWVSPDETDRAPYSAEEVAAV SGSHDLCISGDCFEMLQRTDAVIQVIPYVKVFARVAPEQKELVLTTFKTVGRVTLMCGDGTNDV GALKQGAPETIQERLVDLPAGYVETYKKYTRQGSRVLALAYKLLPDMPVNEARSLERDQVESDL TFAGFAVFNCPIRSDSGAVLQELEQSSHDLVMITGDQALTACHVAGQVHICSKPVLILTRTKTG GFEWVSPDETDRAPYSAEEVAAVSGSHDLCISGDCFEMLQRTDAVIQVIPYVKVFARVAPEQKE LVLTTFKTVGRVTLMCGDGTNDVGALKQGAPETIQERLVDLPAGYVETYKKYTRQGSRVLALAY KLLPDMPVNEARSLERDQVESDLTFAGFAVFNCPIRSDSGAVLQELEQSSHDLVMITGDQALTA CHVAGQVHICSKPVLILTRTKTGGFEWVSPDETDRAPYSAEEVAAVSGSHDLCISGDCFEMLQR TDAVIQVIPYVKVFARVAPEQKELVLTTFKTVGRVTLMCGDGTNDVGALKQ(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os05g0402800_circ_g.2

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