Detailed infomation of each circRNA
General Information | |
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CircRNA Name | 1_circ_ag.16 |
ID in PlantcircBase | ath_circ_001239 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 2456638-2460094 JBrowse» |
Reference genome | TAIR10.38 |
Type | ag-circRNA |
Identification method | circRNA_finder |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | 1_circ_ag.15 1_circ_ag.17 AT1G07920_circ_g.1 1_circ_ag.2 AT1G07920_circ_g.3 1_circ_ag.4 AT1G07930_circ_g.1 AT1G07930_circ_g.2 |
Support reads | 2 |
Tissues | whole_plant |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 1.261551082 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |