Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | 1_circ_ag.4 |
ID in PlantcircBase | ath_circ_001244 |
Alias | At_ciR373, Ath_circ_FC5509 |
Organism | Arabidpsis thaliana |
Position | chr1: 2456966-2460422 JBrowse» |
Reference genome | TAIR10.38 |
Type | ag-circRNA |
Identification method | find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | 1_circ_ag.15 1_circ_ag.16 1_circ_ag.17 AT1G07920_circ_g.1 1_circ_ag.2 AT1G07920_circ_g.3 AT1G07930_circ_g.1 AT1G07930_circ_g.2 |
Support reads | 8 |
Tissues | leaf |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | NA |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 1.214569169 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Ye et al., 2015;Chen et al., 2017a |