Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d008320_circ_g.1 |
ID in PlantcircBase | zma_circ_002668 |
Alias | circ2705 |
Organism | Zea mays |
Position | chr8: 5088874-5093453 JBrowse» |
Reference genome | AGPv4.38 |
Type | ue-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d008320 |
Parent gene annotation |
phosphoadenosine phosphosulfate (PAPS) reductase family protein |
Parent gene strand | + |
Alternative splicing | Zm00001d008320_circ_g.2 |
Support reads | 9 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d008320_T003:10 Zm00001d008320_T006:10 Zm00001d008320_T005:9 Zm00001d008320_T001:10 Zm00001d008320_T004:10 Zm00001d008320_T002:10 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.020751396 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |