Plant Circular RNA Database

Detail information of 5_circ_ag.1

			
						 General Information
					
						CircRNA Name
						5_circ_ag.1
					
						ID in PlantcircBase
						ath_circ_035822
					
						Alias
						NA
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr5: 14764-19449  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							ag-circRNA							
									
						Identification method
						CIRI, find_circ
					
						Parent gene
						
							NA						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						NA
					
						Alternative splicing
						
							AT5G01040_circ_g.2 5_circ_ag.3 5_circ_ag.4 						
					
						Support reads
						19
					
						Tissues
						root, whole_plant
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						NA

General Information
CircRNA Name	5_circ_ag.1
ID in PlantcircBase	ath_circ_035822
Alias	NA
Organism	Arabidpsis thaliana
Position	chr5: 14764-19449 JBrowse»
Reference genome	TAIR10.38
Type	ag-circRNA
Identification method	CIRI, find_circ
Parent gene	NA
Parent gene annotation	NA
Parent gene strand	NA
Alternative splicing	AT5G01040_circ_g.2 5_circ_ag.3 5_circ_ag.4
Support reads	19
Tissues	root, whole_plant
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	NA

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTGTGATTGGCTATTTTGAAGAAGAGGTGAGTGTTGAGTGCTGCGTTTATAATCCTTAGCAAGT
ATGTTTTTCCTTGTACAACTTTGAGGTTAAACATTCtattctcagagcaaggatatgaatctcc
ggcgaggccattgatgaggtaagcatcagaaaccggagctggccgtaattggagaagtctaaca
tctgtgtc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 646
Transcript exons: 14764-14874,15191-15331,15363-15436,15578-15761,19314-19
449
TATTCTCAGAGCAAGGATATGAATCTCCGGCGAGGCCATTGATGAGGTAAGCATCAGAAACCGG
AGCTGGCCGTAATTGGAGAAGTCTAACATCTGTGTCCCACCATTGTTGAAAAACGATAGGAACT
TCCTTGTAGGGTTTAGGAAAAGGGTAAGGACGGCCGGATCGGGGACGGATGACTAGAGCCCCGT
GAAGAGTGGCACGTAGATTAACGACGTGTGCGTGCCATAACAATGTACCTTCTTGTCCAGTGGT
TGAATCGGACATTGAGTTATCATATTCGCACCGTCCATCCATACGCTCTTCAACTGGAAAACTC
CATGCCCCAGTGGATGGTTACATTGTAAGTTGAGTTGTTAATGACATTAACCACAAGAGTGTCG
CCTTCTCTAACGTTTATCGTTGGGCCGGGAAGACTTCCATTAGCTGCCGGTATTATTTGCTCCT
TGCATAACGGTTTCACCACGACGTCTTGGATCTGTTGGTTAGACGTCGTTATTAGTATTGTGGT
CGTGTAGACAGCATCTACAGCAACAACTGTAACGTTGTGATTGGCTATTTTGAAGAAGAGGTGA
GTGTTGAGTGCTGCGTTTATAATCCTTAGCAAGTATGTTTTTCCTTGTACAACTTTGAGGTTAA
ACATTC
Transcript length: 710
Transcript exons: 14764-14874,15191-15436,15578-15727,19247-19449
TATTCTCAGAGCAAGGATATGAATCTCCGGCGAGGCCATTGATGAGGTAAGCATCAGAAACCGG
AGCTGGCCGTAATTGGAGAAGTCTAACATCTGTGTCCCACCATTGTTGAAAAACGATAGGAACT
TCCTTGTAGGGTTTAGGAAAAGGGTAAGGACGGCCGGATCGGGGACGGATGACTAGAGCCCCGT
GAAGAGTGGCACGTAGATTAACGACGTGTGCGTGCCATAACAATGTACCTTCTTGTCCAGTGAT
ATCAAATTGATATGTGAAGTTGTAACCTGGTTGAATCGGACATTGAGTTATCATATTCGCACCG
TCCATCCATACGCTCTTCAACTGGAAAACTCCATGCCCCAGTGGATGGTTACATTGTAAGTTGA
GTTGTTAATGACATTAACCACAAGAGTGTCGCCTTCTCTAACGTTTATCGTTGGGCCGGGAAGA
CTTCCATTAGCTGCCGGTATTATTTGCTCCTTGCATAACGGTTTCACCACGACGTCTTGGTCAG
CGGTGAGAATTGCGTCAATTGTTTGTCCCGGTGTTAAGATCATCACATCGGTGAGGTACGGCGT
CGTGTAGACAGCATCTACAGCAACAACTGTAACGTTGTGATTGGCTATTTTGAAGAAGAGGTGA
GTGTTGAGTGCTGCGTTTATAATCCTTAGCAAGTATGTTTTTCCTTGTACAACTTTGAGGTTAA
ACATTC
						
					

						Genomic sequence
						
							TATTCTCAGAGCAAGGATATGAATCTCCGGCGAGGCCATTGATGAGGTAAGCATCAGAAACCGG
AGCTGGCCGTAATTGGAGAAGTCTAACATCTGTGTCCCACCATTGTTCTTGCATAATAAAAAAA
TTCAAACAAAGTTAATTGATAATTATGAATCCTATATATCATAATTTCTTTATATTGTATATAT
ATATAATTATCTTTAGTGGATATTTATTAAAACCGAACCAACTTGGTCATAATACTCGTCAGAA
TGTGGCGTAGATCGAGAAAGTTGTATCAACTTGTAAAAGACAGCTGTTTGAAAAAACTATATTT
TTTTTGAGATATGTTGCTTTTACTATTATATTGAATCACTATAATCGAGAATTGTCGCTGTCAC
AAAATTGATTTCGACTTTGCAAAAAAAAGAGGGAAATACTTACGAAAAACGATAGGAACTTCCT
TGTAGGGTTTAGGAAAAGGGTAAGGACGGCCGGATCGGGGACGGATGACTAGAGCCCCGTGAAG
AGTGGCACGTAGATTAACGACGTGTGCGTGCCATAACAATGTACCTTCTTGTCCAGTGATATCA
AATTGATATGTGAAGTTGTAACCTGGTTGAATCGGACATTGAGTTATCATATTCGCACCGTCCA
TCCATACGCTCTTCAACTGGAAAACTCCATGCCTATACATATATGTGTGAAATTAAGAAATAAC
TTTTATTAACATCTAAAAAGTCAGTAATTAGTTGATGAAATGATATTGAAATCGACTTCCATTA
TAAAGAAAAAAAACAATAGTAATGAGATCAATAAGTTATCTAATTACCAGTGGATGGTTACATT
GTAAGTTGAGTTGTTAATGACATTAACCACAAGAGTGTCGCCTTCTCTAACGTTTATCGTTGGG
CCGGGAAGACTTCCATTAGCTGCCGGTATTATTTGCTCCTTGCATAACGGTTTCACCACGACGT
CTTGGATCTGTTGGTTAGACGTCGTTATTAGTATTGTGTTACTATTAAATGTTTTTTACCGGCA
AAGTTAAAAACTAAAAATCGGGGCTCATAGATTAGAGATCCATCAAATACGGTATTAATTTCTG
AAATCGAGGAAAAGAAAACACAAACACACGCAATTCAACAACTTTCCGATTTTAAGAAATAAAT
GACTAGTATATAAAATGGAAATTGGTAATATAATATAGTTCCCACAGTAATAAAATTAATAGTT
AATATTTCGAAAATTTTGGTTAGGTTATTAAAAAAGGGAGAGAAAGTGGTATAAGAGTAAATAC
GTGGAGAACATGTTCGACAACAGCTGCTGAGGCAATGGAAGAGAAGAGAAGAAGGACGAGGAAC
GCTTGATTTGAGAGATAATGATGAAGTCGAGGCATTGTTAATGTAAGGATAATTTGCCCCACTT
GTGATTTTGTGAGAGACTCGTACGCGTATTTATAGAACGAACTAATAGAGAGAGATGGCAAAAC
TAAAATACTATATTATTATTCAATTATTAATTTGCCAGAAATGGCAATCTAGACACGATTGAAC
ACGTCGTTGACCAACCAAAAAAAAAAAATAGCAAACTTCCCTCAGGGATTAGTCATTATATACT
GTAATTTTCTTTAGGGTTATGTCACATGTTAAAACTAGTATTAATACTACCTCAAATTTATTTA
GTTTTGTTTTATAAAATTTGCTTTTGTATTTTTAATGCAGAATTTTCAACAAAATTTGTAATTC
TCTCTTTCAACTTATAAATTGGAGGTTATCAAAAAAGAAAACTAGTTAATTGGACAAAACTTAT
GAATTGAACAATTAAACTCATCATAAGTGTTTAAATAGATGATATAATATAAAGTTAAACACCT
TTTTTATGAAACACCCCAAAAATAAGGTAATTCGTTGCAAAAGAAGCTGTTAGATTTATAATTA
TATTGTAACAACTATGTTTTTAGTTTATATACAAATTTGATTGCACTTTCAGTGTTGTAAAAAA
TATACTCCATCTGAAAAGAGGTTATATATGAAAAAGTACTTTGATCATCCCTTTTTTGATAAAG
GATCATCCCTTTTTATATAACAAAAGTGTAATCATTTATGCCCGAACGGAACCAAATAATCAAA
TGTCCACCCCTAATGATTGCTTCTAAAATCTAATTTATTGTTTTTCTGATCACGAACAAATATA
TAACTACAAATTTAATCCAAATTTCTTTGTTTTCGAACTAATTCAACCTTATATTCCCGTTCTT
ACATGAAAACATTTGAAGCTTACATTTAGTAATTAACATTACCATATTCTATATTTTTTTAAAA
AAAAATCTTCTCGAGTCAGCGGCACACATAAACATTATACAGCTAAGTAACTCTGCCATGTGAA
TCACGAGATCGATTTAATTTAAAAGGCGAAATTGTCATGTGTACCGTTGTGCGTGCTTAGTAAG
ACTCAGGACTTAAGAGATCAATATAAATCAGGAAAACTAATATACTTAATGCCAGTTGCATTTG
ATTACTGACTCCAACACATCTTTACCCACCCCTTACATATTAATTTATAAATAAATGTAAAGAA
TAAAAACTTGATTTTTTCATGTAAATATTGATGGACTTGTCATTACTCATTAGCTTTATTAATC
AAAAGAATCAGTCAATTATATTGTATGACTTGCCAGGCGAAAACAATGGATTAGCTAATGATAA
GAAAATAATTACTTTTCTTTTCTATAACGACATTTTTCGCCACAGTTGCTTCGATTGAAGATTA
TTGGGCTAGATGATAAAGTTTAACCCATTAGGTCTAAAGCGTATTTGTAGCCCATTTATCCTTT
TTTTTTATTGTTATGAAAAAAAAAACCTTATACATAAATCTCTGAACCGATCGTTCCATTAATG
CATTAACCACTATAGAATATAATGAAAAAAACTTCCATACATTGAATCGCGAACAAACAAAAAA
AGGGGTTAACTATTACCTACGATTTTTTTTTTGTGAACAATTATTATTATTATTATTTTTTGTG
AACAATTATTACTACGATATATTTCGAAAATAGTGTTAAATTAACAATAAAATTATAGCAAGTA
TGATTCATGACCTAACGACACAAGTAACCAACAGATATTATATCCGTTTGACATTTTTTTTTTT
GCCATTGTTAAATATATAAATAATAATCTTATTAATTTTCGTATCATAGCCAGTGAAATATATG
TCCAAGTTGGCAGGTTATCTCCGTATGGATAGAGGTGAAGAGAGCGTTCAGAGTAATGTTTTGA
ATGTCGGAGACTCGGAGTCTTGGATTGGGAACGTGTAGAGAAATGGAAGCATGGTCGTAAATAA
ACACAAGAAATATACTGAATTTTAAGAAACAATGATTTCGAAAAATGTGGATACAATGACTACG
ATTGATAGTCAACAGTAAATGTAATTTATTTTCTTAAACGAACTTTGCTACTTTTAGTAAGACA
TATCAACATTAGTCGTCCGAGAGTCATAGATCGTAGGATCCCGAGTGCATTGCGGAAGATTCGA
CGGTGGAGATGGCAAACTCGTTTCCCGGGTTGGCCCATTTTGAACTATGAAAGCCATCATAATT
CCTAATGGTAAATGTGCATCCATGTGACAATGGAACAGCCATATACCTGCAAAAAAACAATTTC
ATATTCTTATTAATCCATCGATTAATATCTAATTGGTGTAAATACTAAACATATAGAAATGTTA
CTAACCAGGATTATTAGCGATAAATCTGAGGACAACCCATCCACCTGGTGGTACACCAACGGTA
TTGTGCATTTGCGGGTTAAATAGATTAAGCTTTCTTGCATCACGAATAGGATCATAGTTACCAA
ATCCATAACCTAACACATAGAAGTTGAAACCGTGAAGGTGCATGGGGTGGCTCTCCGGGGTTAG
TATTCCCGTGTTCTGCAAAACGATCTCCACTGTAGAATTAAATCTAATTGTCTTGACGCTAGTC
TTTCTTTCCGGAAACATCATCTCCATGTCAGAATTGGTGGGATGCTGTTCAAATTTTGTGAAAT
CAAATTTAAGCGGTGGTTGGTCGGGAAAATCGTCAGTGTAGACTCCAGTAATGTTGTAAAAATA
AGCCTCTTGCATAGAGATTCTCTCCGGAATCATAAAAGTGCGGTTGTTTAGAGATCCAGCTAAC
CTTTGATCTAACGGTCCAACACACTTGGCGTTCGAAGGACATGGGTCTAAGCCAAGCCCCATCG
TTATGAACATCTTCTCGTCCACGTGACGAGGCACCGGCGTCCAGTGAGGTCCACCCACGAGGCT
AGTGATGTTCGAGGAGAACCTATGAGCGGTGGGTATGTCATTCGCCGGAGGCATCCACGGCTTT
GTTGGCGATGATGATGACGTAGCACCCTCGTAGACGATTAAGCCTCTGGTGGGTTTGGTGTCGG
GGGATGCCGGTACCCCGATGGCACTAAAGTAAGGGATGATGGCCATGTAGTACGTTCCAATGGG
CTGGTCAGCGGTGAGAATTGCGTCAATTGTTTGTCCCGGTGTTAAGATCATCACATCGGTGAGG
TACGGCGTCGTGTAGACAGCATCTACAGCAACAACTGTAACGTTGTGATTGGCTATTTTGAAGA
AGAGGTGAGTGTTGAGTGCTGCGTTTATAATCCTTAGCAAGTATGTTTTTCCTTGTACAACTTT
GAGGTTAAACATTC
						
					

			
		

Sequences
Splice junction sequence	TTGTGATTGGCTATTTTGAAGAAGAGGTGAGTGTTGAGTGCTGCGTTTATAATCCTTAGCAAGT ATGTTTTTCCTTGTACAACTTTGAGGTTAAACATTCtattctcagagcaaggatatgaatctcc ggcgaggccattgatgaggtaagcatcagaaaccggagctggccgtaattggagaagtctaaca tctgtgtc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 646 Transcript exons: 14764-14874,15191-15331,15363-15436,15578-15761,19314-19 449 TATTCTCAGAGCAAGGATATGAATCTCCGGCGAGGCCATTGATGAGGTAAGCATCAGAAACCGG AGCTGGCCGTAATTGGAGAAGTCTAACATCTGTGTCCCACCATTGTTGAAAAACGATAGGAACT TCCTTGTAGGGTTTAGGAAAAGGGTAAGGACGGCCGGATCGGGGACGGATGACTAGAGCCCCGT GAAGAGTGGCACGTAGATTAACGACGTGTGCGTGCCATAACAATGTACCTTCTTGTCCAGTGGT TGAATCGGACATTGAGTTATCATATTCGCACCGTCCATCCATACGCTCTTCAACTGGAAAACTC CATGCCCCAGTGGATGGTTACATTGTAAGTTGAGTTGTTAATGACATTAACCACAAGAGTGTCG CCTTCTCTAACGTTTATCGTTGGGCCGGGAAGACTTCCATTAGCTGCCGGTATTATTTGCTCCT TGCATAACGGTTTCACCACGACGTCTTGGATCTGTTGGTTAGACGTCGTTATTAGTATTGTGGT CGTGTAGACAGCATCTACAGCAACAACTGTAACGTTGTGATTGGCTATTTTGAAGAAGAGGTGA GTGTTGAGTGCTGCGTTTATAATCCTTAGCAAGTATGTTTTTCCTTGTACAACTTTGAGGTTAA ACATTC Transcript length: 710 Transcript exons: 14764-14874,15191-15436,15578-15727,19247-19449 TATTCTCAGAGCAAGGATATGAATCTCCGGCGAGGCCATTGATGAGGTAAGCATCAGAAACCGG AGCTGGCCGTAATTGGAGAAGTCTAACATCTGTGTCCCACCATTGTTGAAAAACGATAGGAACT TCCTTGTAGGGTTTAGGAAAAGGGTAAGGACGGCCGGATCGGGGACGGATGACTAGAGCCCCGT GAAGAGTGGCACGTAGATTAACGACGTGTGCGTGCCATAACAATGTACCTTCTTGTCCAGTGAT ATCAAATTGATATGTGAAGTTGTAACCTGGTTGAATCGGACATTGAGTTATCATATTCGCACCG TCCATCCATACGCTCTTCAACTGGAAAACTCCATGCCCCAGTGGATGGTTACATTGTAAGTTGA GTTGTTAATGACATTAACCACAAGAGTGTCGCCTTCTCTAACGTTTATCGTTGGGCCGGGAAGA CTTCCATTAGCTGCCGGTATTATTTGCTCCTTGCATAACGGTTTCACCACGACGTCTTGGTCAG CGGTGAGAATTGCGTCAATTGTTTGTCCCGGTGTTAAGATCATCACATCGGTGAGGTACGGCGT CGTGTAGACAGCATCTACAGCAACAACTGTAACGTTGTGATTGGCTATTTTGAAGAAGAGGTGA GTGTTGAGTGCTGCGTTTATAATCCTTAGCAAGTATGTTTTTCCTTGTACAACTTTGAGGTTAA ACATTC
Genomic sequence	TATTCTCAGAGCAAGGATATGAATCTCCGGCGAGGCCATTGATGAGGTAAGCATCAGAAACCGG AGCTGGCCGTAATTGGAGAAGTCTAACATCTGTGTCCCACCATTGTTCTTGCATAATAAAAAAA TTCAAACAAAGTTAATTGATAATTATGAATCCTATATATCATAATTTCTTTATATTGTATATAT ATATAATTATCTTTAGTGGATATTTATTAAAACCGAACCAACTTGGTCATAATACTCGTCAGAA TGTGGCGTAGATCGAGAAAGTTGTATCAACTTGTAAAAGACAGCTGTTTGAAAAAACTATATTT TTTTTGAGATATGTTGCTTTTACTATTATATTGAATCACTATAATCGAGAATTGTCGCTGTCAC AAAATTGATTTCGACTTTGCAAAAAAAAGAGGGAAATACTTACGAAAAACGATAGGAACTTCCT TGTAGGGTTTAGGAAAAGGGTAAGGACGGCCGGATCGGGGACGGATGACTAGAGCCCCGTGAAG AGTGGCACGTAGATTAACGACGTGTGCGTGCCATAACAATGTACCTTCTTGTCCAGTGATATCA AATTGATATGTGAAGTTGTAACCTGGTTGAATCGGACATTGAGTTATCATATTCGCACCGTCCA TCCATACGCTCTTCAACTGGAAAACTCCATGCCTATACATATATGTGTGAAATTAAGAAATAAC TTTTATTAACATCTAAAAAGTCAGTAATTAGTTGATGAAATGATATTGAAATCGACTTCCATTA TAAAGAAAAAAAACAATAGTAATGAGATCAATAAGTTATCTAATTACCAGTGGATGGTTACATT GTAAGTTGAGTTGTTAATGACATTAACCACAAGAGTGTCGCCTTCTCTAACGTTTATCGTTGGG CCGGGAAGACTTCCATTAGCTGCCGGTATTATTTGCTCCTTGCATAACGGTTTCACCACGACGT CTTGGATCTGTTGGTTAGACGTCGTTATTAGTATTGTGTTACTATTAAATGTTTTTTACCGGCA AAGTTAAAAACTAAAAATCGGGGCTCATAGATTAGAGATCCATCAAATACGGTATTAATTTCTG AAATCGAGGAAAAGAAAACACAAACACACGCAATTCAACAACTTTCCGATTTTAAGAAATAAAT GACTAGTATATAAAATGGAAATTGGTAATATAATATAGTTCCCACAGTAATAAAATTAATAGTT AATATTTCGAAAATTTTGGTTAGGTTATTAAAAAAGGGAGAGAAAGTGGTATAAGAGTAAATAC GTGGAGAACATGTTCGACAACAGCTGCTGAGGCAATGGAAGAGAAGAGAAGAAGGACGAGGAAC GCTTGATTTGAGAGATAATGATGAAGTCGAGGCATTGTTAATGTAAGGATAATTTGCCCCACTT GTGATTTTGTGAGAGACTCGTACGCGTATTTATAGAACGAACTAATAGAGAGAGATGGCAAAAC TAAAATACTATATTATTATTCAATTATTAATTTGCCAGAAATGGCAATCTAGACACGATTGAAC ACGTCGTTGACCAACCAAAAAAAAAAAATAGCAAACTTCCCTCAGGGATTAGTCATTATATACT GTAATTTTCTTTAGGGTTATGTCACATGTTAAAACTAGTATTAATACTACCTCAAATTTATTTA GTTTTGTTTTATAAAATTTGCTTTTGTATTTTTAATGCAGAATTTTCAACAAAATTTGTAATTC TCTCTTTCAACTTATAAATTGGAGGTTATCAAAAAAGAAAACTAGTTAATTGGACAAAACTTAT GAATTGAACAATTAAACTCATCATAAGTGTTTAAATAGATGATATAATATAAAGTTAAACACCT TTTTTATGAAACACCCCAAAAATAAGGTAATTCGTTGCAAAAGAAGCTGTTAGATTTATAATTA TATTGTAACAACTATGTTTTTAGTTTATATACAAATTTGATTGCACTTTCAGTGTTGTAAAAAA TATACTCCATCTGAAAAGAGGTTATATATGAAAAAGTACTTTGATCATCCCTTTTTTGATAAAG GATCATCCCTTTTTATATAACAAAAGTGTAATCATTTATGCCCGAACGGAACCAAATAATCAAA TGTCCACCCCTAATGATTGCTTCTAAAATCTAATTTATTGTTTTTCTGATCACGAACAAATATA TAACTACAAATTTAATCCAAATTTCTTTGTTTTCGAACTAATTCAACCTTATATTCCCGTTCTT ACATGAAAACATTTGAAGCTTACATTTAGTAATTAACATTACCATATTCTATATTTTTTTAAAA AAAAATCTTCTCGAGTCAGCGGCACACATAAACATTATACAGCTAAGTAACTCTGCCATGTGAA TCACGAGATCGATTTAATTTAAAAGGCGAAATTGTCATGTGTACCGTTGTGCGTGCTTAGTAAG ACTCAGGACTTAAGAGATCAATATAAATCAGGAAAACTAATATACTTAATGCCAGTTGCATTTG ATTACTGACTCCAACACATCTTTACCCACCCCTTACATATTAATTTATAAATAAATGTAAAGAA TAAAAACTTGATTTTTTCATGTAAATATTGATGGACTTGTCATTACTCATTAGCTTTATTAATC AAAAGAATCAGTCAATTATATTGTATGACTTGCCAGGCGAAAACAATGGATTAGCTAATGATAA GAAAATAATTACTTTTCTTTTCTATAACGACATTTTTCGCCACAGTTGCTTCGATTGAAGATTA TTGGGCTAGATGATAAAGTTTAACCCATTAGGTCTAAAGCGTATTTGTAGCCCATTTATCCTTT TTTTTTATTGTTATGAAAAAAAAAACCTTATACATAAATCTCTGAACCGATCGTTCCATTAATG CATTAACCACTATAGAATATAATGAAAAAAACTTCCATACATTGAATCGCGAACAAACAAAAAA AGGGGTTAACTATTACCTACGATTTTTTTTTTGTGAACAATTATTATTATTATTATTTTTTGTG AACAATTATTACTACGATATATTTCGAAAATAGTGTTAAATTAACAATAAAATTATAGCAAGTA TGATTCATGACCTAACGACACAAGTAACCAACAGATATTATATCCGTTTGACATTTTTTTTTTT GCCATTGTTAAATATATAAATAATAATCTTATTAATTTTCGTATCATAGCCAGTGAAATATATG TCCAAGTTGGCAGGTTATCTCCGTATGGATAGAGGTGAAGAGAGCGTTCAGAGTAATGTTTTGA ATGTCGGAGACTCGGAGTCTTGGATTGGGAACGTGTAGAGAAATGGAAGCATGGTCGTAAATAA ACACAAGAAATATACTGAATTTTAAGAAACAATGATTTCGAAAAATGTGGATACAATGACTACG ATTGATAGTCAACAGTAAATGTAATTTATTTTCTTAAACGAACTTTGCTACTTTTAGTAAGACA TATCAACATTAGTCGTCCGAGAGTCATAGATCGTAGGATCCCGAGTGCATTGCGGAAGATTCGA CGGTGGAGATGGCAAACTCGTTTCCCGGGTTGGCCCATTTTGAACTATGAAAGCCATCATAATT CCTAATGGTAAATGTGCATCCATGTGACAATGGAACAGCCATATACCTGCAAAAAAACAATTTC ATATTCTTATTAATCCATCGATTAATATCTAATTGGTGTAAATACTAAACATATAGAAATGTTA CTAACCAGGATTATTAGCGATAAATCTGAGGACAACCCATCCACCTGGTGGTACACCAACGGTA TTGTGCATTTGCGGGTTAAATAGATTAAGCTTTCTTGCATCACGAATAGGATCATAGTTACCAA ATCCATAACCTAACACATAGAAGTTGAAACCGTGAAGGTGCATGGGGTGGCTCTCCGGGGTTAG TATTCCCGTGTTCTGCAAAACGATCTCCACTGTAGAATTAAATCTAATTGTCTTGACGCTAGTC TTTCTTTCCGGAAACATCATCTCCATGTCAGAATTGGTGGGATGCTGTTCAAATTTTGTGAAAT CAAATTTAAGCGGTGGTTGGTCGGGAAAATCGTCAGTGTAGACTCCAGTAATGTTGTAAAAATA AGCCTCTTGCATAGAGATTCTCTCCGGAATCATAAAAGTGCGGTTGTTTAGAGATCCAGCTAAC CTTTGATCTAACGGTCCAACACACTTGGCGTTCGAAGGACATGGGTCTAAGCCAAGCCCCATCG TTATGAACATCTTCTCGTCCACGTGACGAGGCACCGGCGTCCAGTGAGGTCCACCCACGAGGCT AGTGATGTTCGAGGAGAACCTATGAGCGGTGGGTATGTCATTCGCCGGAGGCATCCACGGCTTT GTTGGCGATGATGATGACGTAGCACCCTCGTAGACGATTAAGCCTCTGGTGGGTTTGGTGTCGG GGGATGCCGGTACCCCGATGGCACTAAAGTAAGGGATGATGGCCATGTAGTACGTTCCAATGGG CTGGTCAGCGGTGAGAATTGCGTCAATTGTTTGTCCCGGTGTTAAGATCATCACATCGGTGAGG TACGGCGTCGTGTAGACAGCATCTACAGCAACAACTGTAACGTTGTGATTGGCTATTTTGAAGA AGAGGTGAGTGTTGAGTGCTGCGTTTATAATCCTTAGCAAGTATGTTTTTCCTTGTACAACTTT GAGGTTAAACATTC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.480725593

Conservation Information
Conserved circRNAs	NA
PMCS	0.480725593

			
						 Functional Information
					
						Coding potential
						N
					
						Potential coding position
						
							NA
						
						Potential amino acid sequence
						
							NA
						
						Sponge-miRNAs
						
							ath-miR774b-3p 						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	N
Potential coding position	NA
Potential amino acid sequence	NA
Sponge-miRNAs	ath-miR774b-3p
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of 5_circ_ag.1

Address

Any questions?

Supported by