CircRNA Name |
POPTR_0017s06450_circ_g.2 |
ID in PlantcircBase |
pop_circ_003987 |
Alias |
Chr17:3083788-3084016 |
Organism |
Populus trichocarpa |
Position |
chr17: 4943008-4943236 JBrowse» |
Reference genome |
Populus trichocarpa genome v3.0 |
Type |
e-circRNA
|
Identification method |
CIRI2; circRNA_finder |
Parent gene |
POPTR_0017s06450 |
Parent gene annotation |
NA |
Parent gene strand |
- |
Alternative splicing |
POPTR_0017s06450_circ_g.1 |
Support reads |
3,41,2,16,26,14,14,14,5,132,178,78,94 |
Tissues |
leaf; cambium; xylem |
Exon boundary |
No-No
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
Splicing signals |
GT-AA
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
Number of exons covered |
POPTR_0017s06450.2:1 POPTR_0017s06450.1:1
|