Detailed infomation of each circRNA
General Information | |
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CircRNA Name | POPTR_0017s06450_circ_g.1 |
ID in PlantcircBase | pop_circ_003986 |
Alias | Chr17:3083747|3083974 |
Organism | Populus trichocarpa |
Position | chr17: 4942967-4943194 JBrowse» |
Reference genome | Populus trichocarpa genome v3.0 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | POPTR_0017s06450 |
Parent gene annotation | NA |
Parent gene strand | - |
Alternative splicing | POPTR_0017s06450_circ_g.2 |
Support reads | NA |
Tissues | stem cambium |
Exon boundary | No-No |
Splicing signals | GC-TA |
Number of exons covered | POPTR_0017s06450.2:1 POPTR_0017s06450.1:1 |
Conservation Information | |
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Conserved circRNAs | csa_circ_004229 ghi_circ_001770 ghi_circ_001769 |
PMCS | 1.865299415 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zheng et al., 2020 |