Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d023537_circ_g.1 |
ID in PlantcircBase | zma_circ_003101 |
Alias | circ1458, seedlingc_test_circ_001433 |
Organism | Zea mays |
Position | chr10: 9338035-9338573 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRCexplor2, find_circ |
Parent gene | Zm00001d023537 |
Parent gene annotation |
Chaperone protein dnaJ GFA2 mitochondrial |
Parent gene strand | + |
Alternative splicing | Zm00001d023537_circ_g.2 Zm00001d023537_circ_g.3 |
Support reads | 121 |
Tissues | seedling leaves, seedling |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d023537_T007:3 Zm00001d023537_T004:3 Zm00001d023537_T002:3 Zm00001d023537_T006:3 Zm00001d023537_T003:3 Zm00001d023537_T001:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.037105705 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b; Tang et al., 2018 |