Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d010716_circ_g.3 |
ID in PlantcircBase | zma_circ_002783 |
Alias | circ2755 |
Organism | Zea mays |
Position | chr8: 125531519-125532164 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d010716 |
Parent gene annotation |
TRAF-like superfamily protein |
Parent gene strand | - |
Alternative splicing | Zm00001d010716_circ_g.1 Zm00001d010716_circ_g.2 |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d010716_T047:2 Zm00001d010716_T029:2 Zm00001d010716_T023:2 Zm00001d010716_T052:2 Zm00001d010716_T010:2 Zm00001d010716_T017:2 Zm00001d010716_T003:2 Zm00001d010716_T019:2 Zm00001d010716_T002:2 Zm00001d010716_T013:2 Zm00001d010716_T027:2 Zm00001d010716_T015:2 Zm00001d010716_T026:2 Zm00001d010716_T021:2 Zm00001d010716_T020:2 Zm00001d010716_T024:2 Zm00001d010716_T030:2 Zm00001d010716_T053:2 Zm00001d010716_T006:2 Zm00001d010716_T018:1 Zm00001d010716_T028:2 Zm00001d010716_T004:2 Zm00001d010716_T016:2 Zm00001d010716_T014:2 Zm00001d010716_T038:2 Zm00001d010716_T001:2 Zm00001d010716_T044:2 Zm00001d010716_T025:2 Zm00001d010716_T022:2 Zm00001d010716_T005:2 Zm00001d010716_T008:2 Zm00001d010716_T012:2 Zm00001d010716_T009:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.143204334 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |