Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os10g0208500_circ_g.1 |
ID in PlantcircBase | osa_circ_006435 |
Alias | NA |
Organism | Oryza sativa |
Position | chr10: 7687610-7688867 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | u-circRNA |
Identification method | CIRCexplorer |
Parent gene | Os10g0208500 |
Parent gene annotation |
Hypothetical protein. (Os10t0208500-01);Oxoglutarate/iron-depend ent oxygenase domain containing protein. (Os10t0208500-02);Hypot hetical conserved gene. (Os10t0208500-03) |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 1 |
Tissues | shoot |
Exon boundary | No-No |
Splicing signals | GC-AG |
Number of exons covered | Os10t0208500-02:1 Os10t0208500-01:1 |
Conservation Information | |
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Conserved circRNAs | osi_circ_014267 osi_circ_016240 osi_circ_008900 |
PMCS | 0.351246655 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |