Plant Circular RNA Database

Detail information of Zm00001d052098_circ_g.4

			
						 General Information
					
						CircRNA Name
						Zm00001d052098_circ_g.4
					
						ID in PlantcircBase
						zma_circ_008164
					
						Alias
						Zm04circ00073, zma_circ_0001505, GRMZM2G091143_C2
					
						Organism
						
							Zea mays						
					
						Position
						
							chr4: 179503614-179507253  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRI2, find_circ
					
						Parent gene
						
							Zm00001d052098						
					
						Parent gene annotation
						
							Probable NOT transcription complex subunit VIP2
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d052098_circ_g.1 Zm00001d052098_circ_g.2 Zm00001d052098_circ_g.3 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d052098_T010:5
Zm00001d052098_T005:4
Zm00001d052098_T007:5
Zm00001d052098_T003:4
Zm00001d052098_T002:4
Zm00001d052098_T013:4
Zm00001d052098_T004:3
Zm00001d052098_T006:4
Zm00001d052098_T001:5
Zm00001d052098_T012:5
Zm00001d052098_T011:5
Zm00001d052098_T008:5

General Information
CircRNA Name	Zm00001d052098_circ_g.4
ID in PlantcircBase	zma_circ_008164
Alias	Zm04circ00073, zma_circ_0001505, GRMZM2G091143_C2
Organism	Zea mays
Position	chr4: 179503614-179507253 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2, find_circ
Parent gene	Zm00001d052098
Parent gene annotation	Probable NOT transcription complex subunit VIP2
Parent gene strand	+
Alternative splicing	Zm00001d052098_circ_g.1 Zm00001d052098_circ_g.2 Zm00001d052098_circ_g.3
Support reads	NA
Tissues	leaf, endosperm, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d052098_T010:5 Zm00001d052098_T005:4 Zm00001d052098_T007:5 Zm00001d052098_T003:4 Zm00001d052098_T002:4 Zm00001d052098_T013:4 Zm00001d052098_T004:3 Zm00001d052098_T006:4 Zm00001d052098_T001:5 Zm00001d052098_T012:5 Zm00001d052098_T011:5 Zm00001d052098_T008:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TCACTGCGCAAGCAAGGAGTTGGTGTTAATACCCTTGTGCAACAAAACCAGGAATTCAGCATTC
AAAATGAAGACTTCCCGGCTTTGCCTGGATATAAAGtcaaaccttaatagttcggcatcaaatc
tttcagactcagctggaaggccatttacagcatccttttcgggtcaatctggatcaattccagg
ttttcatc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 3294
Transcript exons: 179503614-179503719,179503812-179503975,179504155-179507
076,179507152-179507253
TCAAACCTTAATAGTTCGGCATCAAATCTTTCAGACTCAGCTGGAAGGCCATTTACAGCATCCT
TTTCGGGTCAATCTGGATCAATTCCAGGTTTTCATCATTCTGGCTTGCATAACACTCATGGAAG
TTACAATCTTCCGAGTATGCCTGGATCACTTGCACAAAGGAATGCTGCCATGAGTGGCCTTCCG
TCCTCTGGGGTTCAACAACCTGGAGGTAGCATTCCTGGGAGATTCCCTTCAAACAACCTTCCAG
TTGGCATGCCTCAGATTCCTCATGCACATTCAGGTGTCAGTGGTAGAGGGATGAATTTTGGCGC
AGGTCCGGCATTTAGTAGCAGCATGAATATTGGTGGTAACATCCAAGGCTTATCCTCGGGCTTG
GGCTCCGGTGGTAATCGCAATTCTGTTCATGGGATGCCAGTATCTTCATCTATAGGAAACTCGG
GTCAACGGATAAGTTCTGTAGGAAATATGGTAAGTGCAAGCAATATTGGAAGAAATATAGGCAC
TGGTGGTTTGTCCGTGCCAAGTATTGCATCACGAATCAATTTGAATGGTAGTGGTGGGAGTGGT
AGTCTGAATGTGCAAGGATCCAGTCGAATGATGAATGGATTGCTTCATCAACAAGGTAATTGAT
TACATGTACCCATAAACAAGTGAAATGTTATATTTTTTAATAGATTTAGCTGGACTCCATGTGC
TATGGTTGGCTGGCTTGTTTCTGGTCAGTTGTAGCATCAACTCTTTAACATTTTGAATATGTTG
GTTGTCCACTTGCTTCATTTCTTGCTCTAAGATTCAAGCAGAACACCCACTTTTCAACTTTTTT
CTTGGCATTAAAATTTGGCGATGAGAAATAAGCAGCCCACTGCTCCATAATCCATATGATGTAA
TTATCTTTTGTAGCCTTTTGAATCAGCATGTAGGTATTGCTAGTTTTGCTTTGTGGGAATATGT
AGTGCTAGAGAGTTTTAAATTTCTAGCCTTTTGAATCAGCATGTAGCCTCATGAAAGTTTCCCC
GGCTATACCAAGTTCTGAACATTTGACATGCAGTTCAACTCATGACCCCAAATGTATATAGCAT
AACAGTATCCTGATCATGATAAAAGCTTGTTCATTTTTTATTTGTATAATTGTGAAACAAGCAT
TAAGGATGAAACAGAGCACCTCTTAGGGAAGGAGGATGAGATCAGACATATATGGTGAGAGTAT
TTTGGCAAATTGTTCAACGGGGAGAATGGGGATACAATCTTTCACTTAGACGACTCTTTTGATG
ACACCAATATACACTTAGTGCGTAGGACCCAAGAATTTGAGGTTAGAGGCATTGAAAAGGATGA
AAGGGAGTAAGGCGAGGGGCCCTGATGGTTTCTTAATTGAGACATGGAGACACCTCAAGGACAC
ATTTATAGTAGGGCTAACCAAGTTATTCAACCATATCTGCCGATTAAACAAGATGACTAACGAA
TGGAGAAGTATATTGGTATCGATCTACGAAAGTAAGGGAGATATTCAAAGTTGTACTAATTATT
GGAGAAATTATTTGATTAGCCATACTATGAAGCTATGGGGGAGAGTTACCGAACATTGTCTGAA
AGGAATGATGAGGATATCTATGAACCAATTTGGTTTCATGCCCGAAAGGTCAACCATGAAAACC
ATTTTCTTAATAAGACAAGTGATAGGGCATTATAGGGAGCAGAAGGACATGCACATGTTTTTCA
TTGACTTGGAGGATGCTTACAACAGAATACTATGGAAATAATGGAATATTATTTGGTGGGCTTT
AGAGAAATATAAAATTCCAATGAAGTATGTTTGACTCATTAAGGACATGTACAACAATGTTGTG
ACTAGTGTTCAAACAAGTGATGGAGACATAGATGACTTTTCGATTAGAATAAGATTACATCAAG
TATCAGTTTTGACTTTTGAGCCCTTACTTTTTTCCTTAGTGATGGATAATGTCACAAGGGACAT
ACAAGGGGGTATCACTTCGTGTATGTTTTTTGCGGATGATGTAGTGCTAGTTGATGAAAGTTGG
GTAGGAGTAAATATGAAACTACAAAACTAGAGTTGTGGTGGGAGACTCTAGAGTCAAAGGTTTT
CGACTCGGTAGAACTGAAACTGAATATACAAGATGTGACTTCAACGTTACTACTCACGAGGAAG
GATATGTTAGTTTGGAAGATCAAGTAGTGCCAAGGATGGATACCTTTCAGTATTTAGGATCAAT
GCTATAGAAAGATATGGATATTTATGATATTAGACGTAGAATCAAAGCAGGGTGGATGAAGTGG
TATCAAATGGCGTTCTATATGACTAGAGGCCAAGTGGGTACCACAGAAGCTAAAAAGACAAGTT
TTATAGGACAATGATTAGACCTGCTATGCTGTATGATACGGAATATCGGTCTACAAAAAGATGA
CATATTCAATAGAGAAGTTTTGTTGAAATGCTTATGTTGTGTTGGATCTATGGCCATACAAGAA
GGGATCAAGTCCAAAACGATGCTATACATGGTAGGCTAGAGGTTGCACCAATTGAATTTTTTTT
TGTCCAACATCGATTGAGATGGTTTGAACATGCCCAATGGAGACCTCCAAGAGGCACCATTGTG
TAGTTGAAATTTAAGACATGATAGCAATGACCAATGGGAAGATAGATAGAGAGGAAGATCAAGA
TCAATGTGGGAAGAGGCAGTAAAAGGAGACTTGAAGGGTTGGAATATAACTAAAGATTTAGCCT
TGAATAAGAGTGCATGAAAAGTAGCTATCCACGTGCATGAAGCCATGAACCTTTGAGTTGTGGT
TTTTGTTGGGTTTCAACTCTAGCTTACCCCAACTTGTTTGGAACAAAAAAAGCTTTGATATTGT
GAAACAAGCCTTCAAAAATTCTGATGGTTAAGAAGTGTGCTGTTTATTACGTATCTGTTTATCA
GAGTGCATGTCTCATCCAGCTTTTTTAATCTCTGAAACCAGCAACTCCTCAGTTGATAAATATG
CTTGGAAGTTCATATCCAACATCTGGAGGTTCATTATCACAGAGCCAAATTCAAGCAGGAAATA
ATTCTTTTAGTTCTATGGGGATGTTGCATGATGCCAGTGACACTGCTCCATTTGACATAAATGA
TTTTCCCCAATTGTCTGGTCGACCTAGTTCTGCTGGTGGTCCGCAAGGACAATATGGATCACTG
CGCAAGCAAGGAGTTGGTGTTAATACCCTTGTGCAACAAAACCAGGAATTCAGCATTCAAAATG
AAGACTTCCCGGCTTTGCCTGGATATAAAG
						
					

						Genomic sequence
						
							TCAAACCTTAATAGTTCGGCATCAAATCTTTCAGACTCAGCTGGAAGGCCATTTACAGCATCCT
TTTCGGGTCAATCTGGATCAATTCCAGGTTTTCATCATTCTGGTGAGCATATATATAATACAAA
AACTTTTGTTAGTTCATTTATACTACATGGCAGACATTAAGTAAGGTTTGTTTTCCTGACATTT
TCAAAGGCTTGCATAACACTCATGGAAGTTACAATCTTCCGAGTATGCCTGGATCACTTGCACA
AAGGAATGCTGCCATGAGTGGCCTTCCGTCCTCTGGGGTTCAACAACCTGGAGGTAGCATTCCT
GGGAGATTCCCTTCAAACAACCTTCCAGTTGGCATGCCTCAGGTTCTAATGCTCACCTTTATTC
ATATAGTGCAATTCATTTCCTTATTTGGTGGTAAACATACATGTTCACTTTAATGTCTTATGGG
ATCCGAGAACCAATTTTTATAATTCAAATGTATGTGTTCTCTGTCTGCACATCCATGTGGAGCA
AGATGATTTATTGTGTGGTCCCTTTGCAGATTCCTCATGCACATTCAGGTGTCAGTGGTAGAGG
GATGAATTTTGGCGCAGGTCCGGCATTTAGTAGCAGCATGAATATTGGTGGTAACATCCAAGGC
TTATCCTCGGGCTTGGGCTCCGGTGGTAATCGCAATTCTGTTCATGGGATGCCAGTATCTTCAT
CTATAGGAAACTCGGGTCAACGGATAAGTTCTGTAGGAAATATGGTAAGTGCAAGCAATATTGG
AAGAAATATAGGCACTGGTGGTTTGTCCGTGCCAAGTATTGCATCACGAATCAATTTGAATGGT
AGTGGTGGGAGTGGTAGTCTGAATGTGCAAGGATCCAGTCGAATGATGAATGGATTGCTTCATC
AACAAGGTAATTGATTACATGTACCCATAAACAAGTGAAATGTTATATTTTTTAATAGATTTAG
CTGGACTCCATGTGCTATGGTTGGCTGGCTTGTTTCTGGTCAGTTGTAGCATCAACTCTTTAAC
ATTTTGAATATGTTGGTTGTCCACTTGCTTCATTTCTTGCTCTAAGATTCAAGCAGAACACCCA
CTTTTCAACTTTTTTCTTGGCATTAAAATTTGGCGATGAGAAATAAGCAGCCCACTGCTCCATA
ATCCATATGATGTAATTATCTTTTGTAGCCTTTTGAATCAGCATGTAGGTATTGCTAGTTTTGC
TTTGTGGGAATATGTAGTGCTAGAGAGTTTTAAATTTCTAGCCTTTTGAATCAGCATGTAGCCT
CATGAAAGTTTCCCCGGCTATACCAAGTTCTGAACATTTGACATGCAGTTCAACTCATGACCCC
AAATGTATATAGCATAACAGTATCCTGATCATGATAAAAGCTTGTTCATTTTTTATTTGTATAA
TTGTGAAACAAGCATTAAGGATGAAACAGAGCACCTCTTAGGGAAGGAGGATGAGATCAGACAT
ATATGGTGAGAGTATTTTGGCAAATTGTTCAACGGGGAGAATGGGGATACAATCTTTCACTTAG
ACGACTCTTTTGATGACACCAATATACACTTAGTGCGTAGGACCCAAGAATTTGAGGTTAGAGG
CATTGAAAAGGATGAAAGGGAGTAAGGCGAGGGGCCCTGATGGTTTCTTAATTGAGACATGGAG
ACACCTCAAGGACACATTTATAGTAGGGCTAACCAAGTTATTCAACCATATCTGCCGATTAAAC
AAGATGACTAACGAATGGAGAAGTATATTGGTATCGATCTACGAAAGTAAGGGAGATATTCAAA
GTTGTACTAATTATTGGAGAAATTATTTGATTAGCCATACTATGAAGCTATGGGGGAGAGTTAC
CGAACATTGTCTGAAAGGAATGATGAGGATATCTATGAACCAATTTGGTTTCATGCCCGAAAGG
TCAACCATGAAAACCATTTTCTTAATAAGACAAGTGATAGGGCATTATAGGGAGCAGAAGGACA
TGCACATGTTTTTCATTGACTTGGAGGATGCTTACAACAGAATACTATGGAAATAATGGAATAT
TATTTGGTGGGCTTTAGAGAAATATAAAATTCCAATGAAGTATGTTTGACTCATTAAGGACATG
TACAACAATGTTGTGACTAGTGTTCAAACAAGTGATGGAGACATAGATGACTTTTCGATTAGAA
TAAGATTACATCAAGTATCAGTTTTGACTTTTGAGCCCTTACTTTTTTCCTTAGTGATGGATAA
TGTCACAAGGGACATACAAGGGGGTATCACTTCGTGTATGTTTTTTGCGGATGATGTAGTGCTA
GTTGATGAAAGTTGGGTAGGAGTAAATATGAAACTACAAAACTAGAGTTGTGGTGGGAGACTCT
AGAGTCAAAGGTTTTCGACTCGGTAGAACTGAAACTGAATATACAAGATGTGACTTCAACGTTA
CTACTCACGAGGAAGGATATGTTAGTTTGGAAGATCAAGTAGTGCCAAGGATGGATACCTTTCA
GTATTTAGGATCAATGCTATAGAAAGATATGGATATTTATGATATTAGACGTAGAATCAAAGCA
GGGTGGATGAAGTGGTATCAAATGGCGTTCTATATGACTAGAGGCCAAGTGGGTACCACAGAAG
CTAAAAAGACAAGTTTTATAGGACAATGATTAGACCTGCTATGCTGTATGATACGGAATATCGG
TCTACAAAAAGATGACATATTCAATAGAGAAGTTTTGTTGAAATGCTTATGTTGTGTTGGATCT
ATGGCCATACAAGAAGGGATCAAGTCCAAAACGATGCTATACATGGTAGGCTAGAGGTTGCACC
AATTGAATTTTTTTTTGTCCAACATCGATTGAGATGGTTTGAACATGCCCAATGGAGACCTCCA
AGAGGCACCATTGTGTAGTTGAAATTTAAGACATGATAGCAATGACCAATGGGAAGATAGATAG
AGAGGAAGATCAAGATCAATGTGGGAAGAGGCAGTAAAAGGAGACTTGAAGGGTTGGAATATAA
CTAAAGATTTAGCCTTGAATAAGAGTGCATGAAAAGTAGCTATCCACGTGCATGAAGCCATGAA
CCTTTGAGTTGTGGTTTTTGTTGGGTTTCAACTCTAGCTTACCCCAACTTGTTTGGAACAAAAA
AAGCTTTGATATTGTGAAACAAGCCTTCAAAAATTCTGATGGTTAAGAAGTGTGCTGTTTATTA
CGTATCTGTTTATCAGAGTGCATGTCTCATCCAGCTTTTTTAATCTCTGAAACCAGCAACTCCT
CAGTTGATAAATATGCTTGGAAGTTCATATCCAACATCTGGAGGTTCATTATCACAGAGCCAAA
TTCAAGCAGGAAATAATTCTTTTAGTTCTATGGGGATGTTGCATGATGCCAGTGACACTGCTCC
ATTTGACATAAATGATTTTCCCCAATTGTCTGGTCGACCTAGTTCTGCTGGTGGTCCGCAAGGA
CAATATGGTAAGAATGCTGGAAACTAATATATTTCTTAATTATTATTTGGATATTGATTTAGCT
AATTTCTTTAAATTACAGGATCACTGCGCAAGCAAGGAGTTGGTGTTAATACCCTTGTGCAACA
AAACCAGGAATTCAGCATTCAAAATGAAGACTTCCCGGCTTTGCCTGGATATAAAG
						
					

			
		

Sequences
Splice junction sequence	TCACTGCGCAAGCAAGGAGTTGGTGTTAATACCCTTGTGCAACAAAACCAGGAATTCAGCATTC AAAATGAAGACTTCCCGGCTTTGCCTGGATATAAAGtcaaaccttaatagttcggcatcaaatc tttcagactcagctggaaggccatttacagcatccttttcgggtcaatctggatcaattccagg ttttcatc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 3294 Transcript exons: 179503614-179503719,179503812-179503975,179504155-179507 076,179507152-179507253 TCAAACCTTAATAGTTCGGCATCAAATCTTTCAGACTCAGCTGGAAGGCCATTTACAGCATCCT TTTCGGGTCAATCTGGATCAATTCCAGGTTTTCATCATTCTGGCTTGCATAACACTCATGGAAG TTACAATCTTCCGAGTATGCCTGGATCACTTGCACAAAGGAATGCTGCCATGAGTGGCCTTCCG TCCTCTGGGGTTCAACAACCTGGAGGTAGCATTCCTGGGAGATTCCCTTCAAACAACCTTCCAG TTGGCATGCCTCAGATTCCTCATGCACATTCAGGTGTCAGTGGTAGAGGGATGAATTTTGGCGC AGGTCCGGCATTTAGTAGCAGCATGAATATTGGTGGTAACATCCAAGGCTTATCCTCGGGCTTG GGCTCCGGTGGTAATCGCAATTCTGTTCATGGGATGCCAGTATCTTCATCTATAGGAAACTCGG GTCAACGGATAAGTTCTGTAGGAAATATGGTAAGTGCAAGCAATATTGGAAGAAATATAGGCAC TGGTGGTTTGTCCGTGCCAAGTATTGCATCACGAATCAATTTGAATGGTAGTGGTGGGAGTGGT AGTCTGAATGTGCAAGGATCCAGTCGAATGATGAATGGATTGCTTCATCAACAAGGTAATTGAT TACATGTACCCATAAACAAGTGAAATGTTATATTTTTTAATAGATTTAGCTGGACTCCATGTGC TATGGTTGGCTGGCTTGTTTCTGGTCAGTTGTAGCATCAACTCTTTAACATTTTGAATATGTTG GTTGTCCACTTGCTTCATTTCTTGCTCTAAGATTCAAGCAGAACACCCACTTTTCAACTTTTTT CTTGGCATTAAAATTTGGCGATGAGAAATAAGCAGCCCACTGCTCCATAATCCATATGATGTAA TTATCTTTTGTAGCCTTTTGAATCAGCATGTAGGTATTGCTAGTTTTGCTTTGTGGGAATATGT AGTGCTAGAGAGTTTTAAATTTCTAGCCTTTTGAATCAGCATGTAGCCTCATGAAAGTTTCCCC GGCTATACCAAGTTCTGAACATTTGACATGCAGTTCAACTCATGACCCCAAATGTATATAGCAT AACAGTATCCTGATCATGATAAAAGCTTGTTCATTTTTTATTTGTATAATTGTGAAACAAGCAT TAAGGATGAAACAGAGCACCTCTTAGGGAAGGAGGATGAGATCAGACATATATGGTGAGAGTAT TTTGGCAAATTGTTCAACGGGGAGAATGGGGATACAATCTTTCACTTAGACGACTCTTTTGATG ACACCAATATACACTTAGTGCGTAGGACCCAAGAATTTGAGGTTAGAGGCATTGAAAAGGATGA AAGGGAGTAAGGCGAGGGGCCCTGATGGTTTCTTAATTGAGACATGGAGACACCTCAAGGACAC ATTTATAGTAGGGCTAACCAAGTTATTCAACCATATCTGCCGATTAAACAAGATGACTAACGAA TGGAGAAGTATATTGGTATCGATCTACGAAAGTAAGGGAGATATTCAAAGTTGTACTAATTATT GGAGAAATTATTTGATTAGCCATACTATGAAGCTATGGGGGAGAGTTACCGAACATTGTCTGAA AGGAATGATGAGGATATCTATGAACCAATTTGGTTTCATGCCCGAAAGGTCAACCATGAAAACC ATTTTCTTAATAAGACAAGTGATAGGGCATTATAGGGAGCAGAAGGACATGCACATGTTTTTCA TTGACTTGGAGGATGCTTACAACAGAATACTATGGAAATAATGGAATATTATTTGGTGGGCTTT AGAGAAATATAAAATTCCAATGAAGTATGTTTGACTCATTAAGGACATGTACAACAATGTTGTG ACTAGTGTTCAAACAAGTGATGGAGACATAGATGACTTTTCGATTAGAATAAGATTACATCAAG TATCAGTTTTGACTTTTGAGCCCTTACTTTTTTCCTTAGTGATGGATAATGTCACAAGGGACAT ACAAGGGGGTATCACTTCGTGTATGTTTTTTGCGGATGATGTAGTGCTAGTTGATGAAAGTTGG GTAGGAGTAAATATGAAACTACAAAACTAGAGTTGTGGTGGGAGACTCTAGAGTCAAAGGTTTT CGACTCGGTAGAACTGAAACTGAATATACAAGATGTGACTTCAACGTTACTACTCACGAGGAAG GATATGTTAGTTTGGAAGATCAAGTAGTGCCAAGGATGGATACCTTTCAGTATTTAGGATCAAT GCTATAGAAAGATATGGATATTTATGATATTAGACGTAGAATCAAAGCAGGGTGGATGAAGTGG TATCAAATGGCGTTCTATATGACTAGAGGCCAAGTGGGTACCACAGAAGCTAAAAAGACAAGTT TTATAGGACAATGATTAGACCTGCTATGCTGTATGATACGGAATATCGGTCTACAAAAAGATGA CATATTCAATAGAGAAGTTTTGTTGAAATGCTTATGTTGTGTTGGATCTATGGCCATACAAGAA GGGATCAAGTCCAAAACGATGCTATACATGGTAGGCTAGAGGTTGCACCAATTGAATTTTTTTT TGTCCAACATCGATTGAGATGGTTTGAACATGCCCAATGGAGACCTCCAAGAGGCACCATTGTG TAGTTGAAATTTAAGACATGATAGCAATGACCAATGGGAAGATAGATAGAGAGGAAGATCAAGA TCAATGTGGGAAGAGGCAGTAAAAGGAGACTTGAAGGGTTGGAATATAACTAAAGATTTAGCCT TGAATAAGAGTGCATGAAAAGTAGCTATCCACGTGCATGAAGCCATGAACCTTTGAGTTGTGGT TTTTGTTGGGTTTCAACTCTAGCTTACCCCAACTTGTTTGGAACAAAAAAAGCTTTGATATTGT GAAACAAGCCTTCAAAAATTCTGATGGTTAAGAAGTGTGCTGTTTATTACGTATCTGTTTATCA GAGTGCATGTCTCATCCAGCTTTTTTAATCTCTGAAACCAGCAACTCCTCAGTTGATAAATATG CTTGGAAGTTCATATCCAACATCTGGAGGTTCATTATCACAGAGCCAAATTCAAGCAGGAAATA ATTCTTTTAGTTCTATGGGGATGTTGCATGATGCCAGTGACACTGCTCCATTTGACATAAATGA TTTTCCCCAATTGTCTGGTCGACCTAGTTCTGCTGGTGGTCCGCAAGGACAATATGGATCACTG CGCAAGCAAGGAGTTGGTGTTAATACCCTTGTGCAACAAAACCAGGAATTCAGCATTCAAAATG AAGACTTCCCGGCTTTGCCTGGATATAAAG
Genomic sequence	TCAAACCTTAATAGTTCGGCATCAAATCTTTCAGACTCAGCTGGAAGGCCATTTACAGCATCCT TTTCGGGTCAATCTGGATCAATTCCAGGTTTTCATCATTCTGGTGAGCATATATATAATACAAA AACTTTTGTTAGTTCATTTATACTACATGGCAGACATTAAGTAAGGTTTGTTTTCCTGACATTT TCAAAGGCTTGCATAACACTCATGGAAGTTACAATCTTCCGAGTATGCCTGGATCACTTGCACA AAGGAATGCTGCCATGAGTGGCCTTCCGTCCTCTGGGGTTCAACAACCTGGAGGTAGCATTCCT GGGAGATTCCCTTCAAACAACCTTCCAGTTGGCATGCCTCAGGTTCTAATGCTCACCTTTATTC ATATAGTGCAATTCATTTCCTTATTTGGTGGTAAACATACATGTTCACTTTAATGTCTTATGGG ATCCGAGAACCAATTTTTATAATTCAAATGTATGTGTTCTCTGTCTGCACATCCATGTGGAGCA AGATGATTTATTGTGTGGTCCCTTTGCAGATTCCTCATGCACATTCAGGTGTCAGTGGTAGAGG GATGAATTTTGGCGCAGGTCCGGCATTTAGTAGCAGCATGAATATTGGTGGTAACATCCAAGGC TTATCCTCGGGCTTGGGCTCCGGTGGTAATCGCAATTCTGTTCATGGGATGCCAGTATCTTCAT CTATAGGAAACTCGGGTCAACGGATAAGTTCTGTAGGAAATATGGTAAGTGCAAGCAATATTGG AAGAAATATAGGCACTGGTGGTTTGTCCGTGCCAAGTATTGCATCACGAATCAATTTGAATGGT AGTGGTGGGAGTGGTAGTCTGAATGTGCAAGGATCCAGTCGAATGATGAATGGATTGCTTCATC AACAAGGTAATTGATTACATGTACCCATAAACAAGTGAAATGTTATATTTTTTAATAGATTTAG CTGGACTCCATGTGCTATGGTTGGCTGGCTTGTTTCTGGTCAGTTGTAGCATCAACTCTTTAAC ATTTTGAATATGTTGGTTGTCCACTTGCTTCATTTCTTGCTCTAAGATTCAAGCAGAACACCCA CTTTTCAACTTTTTTCTTGGCATTAAAATTTGGCGATGAGAAATAAGCAGCCCACTGCTCCATA ATCCATATGATGTAATTATCTTTTGTAGCCTTTTGAATCAGCATGTAGGTATTGCTAGTTTTGC TTTGTGGGAATATGTAGTGCTAGAGAGTTTTAAATTTCTAGCCTTTTGAATCAGCATGTAGCCT CATGAAAGTTTCCCCGGCTATACCAAGTTCTGAACATTTGACATGCAGTTCAACTCATGACCCC AAATGTATATAGCATAACAGTATCCTGATCATGATAAAAGCTTGTTCATTTTTTATTTGTATAA TTGTGAAACAAGCATTAAGGATGAAACAGAGCACCTCTTAGGGAAGGAGGATGAGATCAGACAT ATATGGTGAGAGTATTTTGGCAAATTGTTCAACGGGGAGAATGGGGATACAATCTTTCACTTAG ACGACTCTTTTGATGACACCAATATACACTTAGTGCGTAGGACCCAAGAATTTGAGGTTAGAGG CATTGAAAAGGATGAAAGGGAGTAAGGCGAGGGGCCCTGATGGTTTCTTAATTGAGACATGGAG ACACCTCAAGGACACATTTATAGTAGGGCTAACCAAGTTATTCAACCATATCTGCCGATTAAAC AAGATGACTAACGAATGGAGAAGTATATTGGTATCGATCTACGAAAGTAAGGGAGATATTCAAA GTTGTACTAATTATTGGAGAAATTATTTGATTAGCCATACTATGAAGCTATGGGGGAGAGTTAC CGAACATTGTCTGAAAGGAATGATGAGGATATCTATGAACCAATTTGGTTTCATGCCCGAAAGG TCAACCATGAAAACCATTTTCTTAATAAGACAAGTGATAGGGCATTATAGGGAGCAGAAGGACA TGCACATGTTTTTCATTGACTTGGAGGATGCTTACAACAGAATACTATGGAAATAATGGAATAT TATTTGGTGGGCTTTAGAGAAATATAAAATTCCAATGAAGTATGTTTGACTCATTAAGGACATG TACAACAATGTTGTGACTAGTGTTCAAACAAGTGATGGAGACATAGATGACTTTTCGATTAGAA TAAGATTACATCAAGTATCAGTTTTGACTTTTGAGCCCTTACTTTTTTCCTTAGTGATGGATAA TGTCACAAGGGACATACAAGGGGGTATCACTTCGTGTATGTTTTTTGCGGATGATGTAGTGCTA GTTGATGAAAGTTGGGTAGGAGTAAATATGAAACTACAAAACTAGAGTTGTGGTGGGAGACTCT AGAGTCAAAGGTTTTCGACTCGGTAGAACTGAAACTGAATATACAAGATGTGACTTCAACGTTA CTACTCACGAGGAAGGATATGTTAGTTTGGAAGATCAAGTAGTGCCAAGGATGGATACCTTTCA GTATTTAGGATCAATGCTATAGAAAGATATGGATATTTATGATATTAGACGTAGAATCAAAGCA GGGTGGATGAAGTGGTATCAAATGGCGTTCTATATGACTAGAGGCCAAGTGGGTACCACAGAAG CTAAAAAGACAAGTTTTATAGGACAATGATTAGACCTGCTATGCTGTATGATACGGAATATCGG TCTACAAAAAGATGACATATTCAATAGAGAAGTTTTGTTGAAATGCTTATGTTGTGTTGGATCT ATGGCCATACAAGAAGGGATCAAGTCCAAAACGATGCTATACATGGTAGGCTAGAGGTTGCACC AATTGAATTTTTTTTTGTCCAACATCGATTGAGATGGTTTGAACATGCCCAATGGAGACCTCCA AGAGGCACCATTGTGTAGTTGAAATTTAAGACATGATAGCAATGACCAATGGGAAGATAGATAG AGAGGAAGATCAAGATCAATGTGGGAAGAGGCAGTAAAAGGAGACTTGAAGGGTTGGAATATAA CTAAAGATTTAGCCTTGAATAAGAGTGCATGAAAAGTAGCTATCCACGTGCATGAAGCCATGAA CCTTTGAGTTGTGGTTTTTGTTGGGTTTCAACTCTAGCTTACCCCAACTTGTTTGGAACAAAAA AAGCTTTGATATTGTGAAACAAGCCTTCAAAAATTCTGATGGTTAAGAAGTGTGCTGTTTATTA CGTATCTGTTTATCAGAGTGCATGTCTCATCCAGCTTTTTTAATCTCTGAAACCAGCAACTCCT CAGTTGATAAATATGCTTGGAAGTTCATATCCAACATCTGGAGGTTCATTATCACAGAGCCAAA TTCAAGCAGGAAATAATTCTTTTAGTTCTATGGGGATGTTGCATGATGCCAGTGACACTGCTCC ATTTGACATAAATGATTTTCCCCAATTGTCTGGTCGACCTAGTTCTGCTGGTGGTCCGCAAGGA CAATATGGTAAGAATGCTGGAAACTAATATATTTCTTAATTATTATTTGGATATTGATTTAGCT AATTTCTTTAAATTACAGGATCACTGCGCAAGCAAGGAGTTGGTGTTAATACCCTTGTGCAACA AAACCAGGAATTCAGCATTCAAAATGAAGACTTCCCGGCTTTGCCTGGATATAAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.094643827

Conservation Information
Conserved circRNAs	NA
PMCS	0.094643827

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							179507018-179504520(+)
179506891-179503621(+)
						
						Potential amino acid sequence
						
							MIFPNCLVDLVLLVVRKDNMDHCASKELVLIPLCNKTRNSAFKMKTSRLCLDIKSNLNSSASNL
SDSAGRPFTASFSGQSGSIPGFHHSGLHNTHGSYNLPSMPGSLAQRNAAMSGLPSSGVQQPGGS
IPGRFPSNNLPVGMPQIPHAHSGVSGRGMNFGAGPAFSSSMNIGGNIQGLSSGLGSGGNRNSVH
GMPVSSSIGNSGQRISSVGNMVSASNIGRNIGTGGLSVPSIASRINLNGSGGSGSLNVQGSSRM
MNGLLHQQGN*(+)
MLGSSYPTSGGSLSQSQIQAGNNSFSSMGMLHDASDTAPFDINDFPQLSGRPSSAGGPQGQYGS
LRKQGVGVNTLVQQNQEFSIQNEDFPALPGYKVKP*(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	179507018-179504520(+) 179506891-179503621(+)
Potential amino acid sequence	MIFPNCLVDLVLLVVRKDNMDHCASKELVLIPLCNKTRNSAFKMKTSRLCLDIKSNLNSSASNL SDSAGRPFTASFSGQSGSIPGFHHSGLHNTHGSYNLPSMPGSLAQRNAAMSGLPSSGVQQPGGS IPGRFPSNNLPVGMPQIPHAHSGVSGRGMNFGAGPAFSSSMNIGGNIQGLSSGLGSGGNRNSVH GMPVSSSIGNSGQRISSVGNMVSASNIGRNIGTGGLSVPSIASRINLNGSGGSGSLNVQGSSRM MNGLLHQQGN(+) MLGSSYPTSGGSLSQSQIQAGNNSFSSMGMLHDASDTAPFDINDFPQLSGRPSSAGGPQGQYGS LRKQGVGVNTLVQQNQEFSIQNEDFPALPGYKVKP(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020; Ma et al., 2021b;Zhang et al., 2019

circRNA

Detail information of Zm00001d052098_circ_g.4

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