Plant Circular RNA Database

Detail information of Zm00001d052098_circ_g.2

			
						 General Information
					
						CircRNA Name
						Zm00001d052098_circ_g.2
					
						ID in PlantcircBase
						zma_circ_008163
					
						Alias
						Zm04circ00072, GRMZM2G091143_C1
					
						Organism
						
							Zea mays						
					
						Position
						
							chr4: 179502635-179507253  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Zm00001d052098						
					
						Parent gene annotation
						
							Probable NOT transcription complex subunit VIP2
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d052098_circ_g.1 Zm00001d052098_circ_g.3 Zm00001d052098_circ_g.4 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d052098_T001:6
Zm00001d052098_T008:6
Zm00001d052098_T006:5
Zm00001d052098_T002:5
Zm00001d052098_T003:5
Zm00001d052098_T005:5
Zm00001d052098_T004:4
Zm00001d052098_T011:6
Zm00001d052098_T007:6
Zm00001d052098_T013:4
Zm00001d052098_T010:6
Zm00001d052098_T012:6

General Information
CircRNA Name	Zm00001d052098_circ_g.2
ID in PlantcircBase	zma_circ_008163
Alias	Zm04circ00072, GRMZM2G091143_C1
Organism	Zea mays
Position	chr4: 179502635-179507253 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2
Parent gene	Zm00001d052098
Parent gene annotation	Probable NOT transcription complex subunit VIP2
Parent gene strand	+
Alternative splicing	Zm00001d052098_circ_g.1 Zm00001d052098_circ_g.3 Zm00001d052098_circ_g.4
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d052098_T001:6 Zm00001d052098_T008:6 Zm00001d052098_T006:5 Zm00001d052098_T002:5 Zm00001d052098_T003:5 Zm00001d052098_T005:5 Zm00001d052098_T004:4 Zm00001d052098_T011:6 Zm00001d052098_T007:6 Zm00001d052098_T013:4 Zm00001d052098_T010:6 Zm00001d052098_T012:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TCACTGCGCAAGCAAGGAGTTGGTGTTAATACCCTTGTGCAACAAAACCAGGAATTCAGCATTC
AAAATGAAGACTTCCCGGCTTTGCCTGGATATAAAGgttggaagggtttgctgtatcatgcatt
ttttgtggataatcttcattttctcttgagtcaccgattcttttgttgtcttcaaaatgtcggg
cttgctga

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 3396
Transcript exons: 179502635-179502736,179503614-179503719,179503812-179503
975,179504155-179507076,179507152-179507253
GTTGGAAGGGTTTGCTGTATCATGCATTTTTTGTGGATAATCTTCATTTTCTCTTGAGTCACCG
ATTCTTTTGTTGTCTTCAAAATGTCGGGCTTGCTGAACTCAAACCTTAATAGTTCGGCATCAAA
TCTTTCAGACTCAGCTGGAAGGCCATTTACAGCATCCTTTTCGGGTCAATCTGGATCAATTCCA
GGTTTTCATCATTCTGGCTTGCATAACACTCATGGAAGTTACAATCTTCCGAGTATGCCTGGAT
CACTTGCACAAAGGAATGCTGCCATGAGTGGCCTTCCGTCCTCTGGGGTTCAACAACCTGGAGG
TAGCATTCCTGGGAGATTCCCTTCAAACAACCTTCCAGTTGGCATGCCTCAGATTCCTCATGCA
CATTCAGGTGTCAGTGGTAGAGGGATGAATTTTGGCGCAGGTCCGGCATTTAGTAGCAGCATGA
ATATTGGTGGTAACATCCAAGGCTTATCCTCGGGCTTGGGCTCCGGTGGTAATCGCAATTCTGT
TCATGGGATGCCAGTATCTTCATCTATAGGAAACTCGGGTCAACGGATAAGTTCTGTAGGAAAT
ATGGTAAGTGCAAGCAATATTGGAAGAAATATAGGCACTGGTGGTTTGTCCGTGCCAAGTATTG
CATCACGAATCAATTTGAATGGTAGTGGTGGGAGTGGTAGTCTGAATGTGCAAGGATCCAGTCG
AATGATGAATGGATTGCTTCATCAACAAGGTAATTGATTACATGTACCCATAAACAAGTGAAAT
GTTATATTTTTTAATAGATTTAGCTGGACTCCATGTGCTATGGTTGGCTGGCTTGTTTCTGGTC
AGTTGTAGCATCAACTCTTTAACATTTTGAATATGTTGGTTGTCCACTTGCTTCATTTCTTGCT
CTAAGATTCAAGCAGAACACCCACTTTTCAACTTTTTTCTTGGCATTAAAATTTGGCGATGAGA
AATAAGCAGCCCACTGCTCCATAATCCATATGATGTAATTATCTTTTGTAGCCTTTTGAATCAG
CATGTAGGTATTGCTAGTTTTGCTTTGTGGGAATATGTAGTGCTAGAGAGTTTTAAATTTCTAG
CCTTTTGAATCAGCATGTAGCCTCATGAAAGTTTCCCCGGCTATACCAAGTTCTGAACATTTGA
CATGCAGTTCAACTCATGACCCCAAATGTATATAGCATAACAGTATCCTGATCATGATAAAAGC
TTGTTCATTTTTTATTTGTATAATTGTGAAACAAGCATTAAGGATGAAACAGAGCACCTCTTAG
GGAAGGAGGATGAGATCAGACATATATGGTGAGAGTATTTTGGCAAATTGTTCAACGGGGAGAA
TGGGGATACAATCTTTCACTTAGACGACTCTTTTGATGACACCAATATACACTTAGTGCGTAGG
ACCCAAGAATTTGAGGTTAGAGGCATTGAAAAGGATGAAAGGGAGTAAGGCGAGGGGCCCTGAT
GGTTTCTTAATTGAGACATGGAGACACCTCAAGGACACATTTATAGTAGGGCTAACCAAGTTAT
TCAACCATATCTGCCGATTAAACAAGATGACTAACGAATGGAGAAGTATATTGGTATCGATCTA
CGAAAGTAAGGGAGATATTCAAAGTTGTACTAATTATTGGAGAAATTATTTGATTAGCCATACT
ATGAAGCTATGGGGGAGAGTTACCGAACATTGTCTGAAAGGAATGATGAGGATATCTATGAACC
AATTTGGTTTCATGCCCGAAAGGTCAACCATGAAAACCATTTTCTTAATAAGACAAGTGATAGG
GCATTATAGGGAGCAGAAGGACATGCACATGTTTTTCATTGACTTGGAGGATGCTTACAACAGA
ATACTATGGAAATAATGGAATATTATTTGGTGGGCTTTAGAGAAATATAAAATTCCAATGAAGT
ATGTTTGACTCATTAAGGACATGTACAACAATGTTGTGACTAGTGTTCAAACAAGTGATGGAGA
CATAGATGACTTTTCGATTAGAATAAGATTACATCAAGTATCAGTTTTGACTTTTGAGCCCTTA
CTTTTTTCCTTAGTGATGGATAATGTCACAAGGGACATACAAGGGGGTATCACTTCGTGTATGT
TTTTTGCGGATGATGTAGTGCTAGTTGATGAAAGTTGGGTAGGAGTAAATATGAAACTACAAAA
CTAGAGTTGTGGTGGGAGACTCTAGAGTCAAAGGTTTTCGACTCGGTAGAACTGAAACTGAATA
TACAAGATGTGACTTCAACGTTACTACTCACGAGGAAGGATATGTTAGTTTGGAAGATCAAGTA
GTGCCAAGGATGGATACCTTTCAGTATTTAGGATCAATGCTATAGAAAGATATGGATATTTATG
ATATTAGACGTAGAATCAAAGCAGGGTGGATGAAGTGGTATCAAATGGCGTTCTATATGACTAG
AGGCCAAGTGGGTACCACAGAAGCTAAAAAGACAAGTTTTATAGGACAATGATTAGACCTGCTA
TGCTGTATGATACGGAATATCGGTCTACAAAAAGATGACATATTCAATAGAGAAGTTTTGTTGA
AATGCTTATGTTGTGTTGGATCTATGGCCATACAAGAAGGGATCAAGTCCAAAACGATGCTATA
CATGGTAGGCTAGAGGTTGCACCAATTGAATTTTTTTTTGTCCAACATCGATTGAGATGGTTTG
AACATGCCCAATGGAGACCTCCAAGAGGCACCATTGTGTAGTTGAAATTTAAGACATGATAGCA
ATGACCAATGGGAAGATAGATAGAGAGGAAGATCAAGATCAATGTGGGAAGAGGCAGTAAAAGG
AGACTTGAAGGGTTGGAATATAACTAAAGATTTAGCCTTGAATAAGAGTGCATGAAAAGTAGCT
ATCCACGTGCATGAAGCCATGAACCTTTGAGTTGTGGTTTTTGTTGGGTTTCAACTCTAGCTTA
CCCCAACTTGTTTGGAACAAAAAAAGCTTTGATATTGTGAAACAAGCCTTCAAAAATTCTGATG
GTTAAGAAGTGTGCTGTTTATTACGTATCTGTTTATCAGAGTGCATGTCTCATCCAGCTTTTTT
AATCTCTGAAACCAGCAACTCCTCAGTTGATAAATATGCTTGGAAGTTCATATCCAACATCTGG
AGGTTCATTATCACAGAGCCAAATTCAAGCAGGAAATAATTCTTTTAGTTCTATGGGGATGTTG
CATGATGCCAGTGACACTGCTCCATTTGACATAAATGATTTTCCCCAATTGTCTGGTCGACCTA
GTTCTGCTGGTGGTCCGCAAGGACAATATGGATCACTGCGCAAGCAAGGAGTTGGTGTTAATAC
CCTTGTGCAACAAAACCAGGAATTCAGCATTCAAAATGAAGACTTCCCGGCTTTGCCTGGATAT
AAAG
						
					

						Genomic sequence
						
							GTTGGAAGGGTTTGCTGTATCATGCATTTTTTGTGGATAATCTTCATTTTCTCTTGAGTCACCG
ATTCTTTTGTTGTCTTCAAAATGTCGGGCTTGCTGAACGTATGTACTTGCACAAGTATACTTGC
CATTGGGTTTTCTTGCCACCATTATGTATTCATGTTGAAAGGCAGGCCTGGTGTAGTGGTGAGA
GCTGTATCACTGAGTCACTAGGTCATGTGTTTGAAGCAGCCTCCGCATTTGTGGGGGAAGGATT
GCTTCGATTTACCCCTTTTTCAGACCCCACTCATGCGGGACCCTCCAGCACTTGGTCTGCCCAT
TATGTATTTATATTCTTTCCATTTGTTTACCACATTGGGTCTAGAATGGATGTTTTTCTTTGGT
GAAAGATAAATTTCTACAACTTTAGTCGTCAGCAGACAAATCTTTTTAGAGATTTCATGCAAGA
GTTATATGAATGGAATCATCATCAAAACTACATTGCCAGTTGTCACAACAATATTTGTAATGTT
CGATATATGTTACTTATATTAGGTGAAGTCAAATTTGGGCACTGTTAGACAGCCATATTTTTAA
TGTTTGATATACTCCCTATGTCTTTTTGCCTGTTATGGCATTGTACTGTGGTCCACTTCGGACC
TTTCTCTCTTTCAATATAATGATGCACAGTTCTCCTGCGCGTTCGAGAAAAAAAATGTTTGATA
TACGGTACTTGTATTAGGTGGCAGTAAAGTTTGTGCACTGAGACTGTACCAACAGTTAAATCAG
GGAAGATGTATTGTTTTGTTGTGATCTGGTAGGTCATTTGCTTGTTTGTACACTCCTTTTTTTT
GTGGACAACAAATGAGTATTACATCTTGAACTCTTTGATGACTATCTCCTACTCAAACGTCTTT
AGGGGCCTGCTTATCTCAATATGGTTTGCAGTCTTAACTCAATATTATGTTTATTTTTTACTAA
CTCATTTTTTCCTTGGCAGTCAAACCTTAATAGTTCGGCATCAAATCTTTCAGACTCAGCTGGA
AGGCCATTTACAGCATCCTTTTCGGGTCAATCTGGATCAATTCCAGGTTTTCATCATTCTGGTG
AGCATATATATAATACAAAAACTTTTGTTAGTTCATTTATACTACATGGCAGACATTAAGTAAG
GTTTGTTTTCCTGACATTTTCAAAGGCTTGCATAACACTCATGGAAGTTACAATCTTCCGAGTA
TGCCTGGATCACTTGCACAAAGGAATGCTGCCATGAGTGGCCTTCCGTCCTCTGGGGTTCAACA
ACCTGGAGGTAGCATTCCTGGGAGATTCCCTTCAAACAACCTTCCAGTTGGCATGCCTCAGGTT
CTAATGCTCACCTTTATTCATATAGTGCAATTCATTTCCTTATTTGGTGGTAAACATACATGTT
CACTTTAATGTCTTATGGGATCCGAGAACCAATTTTTATAATTCAAATGTATGTGTTCTCTGTC
TGCACATCCATGTGGAGCAAGATGATTTATTGTGTGGTCCCTTTGCAGATTCCTCATGCACATT
CAGGTGTCAGTGGTAGAGGGATGAATTTTGGCGCAGGTCCGGCATTTAGTAGCAGCATGAATAT
TGGTGGTAACATCCAAGGCTTATCCTCGGGCTTGGGCTCCGGTGGTAATCGCAATTCTGTTCAT
GGGATGCCAGTATCTTCATCTATAGGAAACTCGGGTCAACGGATAAGTTCTGTAGGAAATATGG
TAAGTGCAAGCAATATTGGAAGAAATATAGGCACTGGTGGTTTGTCCGTGCCAAGTATTGCATC
ACGAATCAATTTGAATGGTAGTGGTGGGAGTGGTAGTCTGAATGTGCAAGGATCCAGTCGAATG
ATGAATGGATTGCTTCATCAACAAGGTAATTGATTACATGTACCCATAAACAAGTGAAATGTTA
TATTTTTTAATAGATTTAGCTGGACTCCATGTGCTATGGTTGGCTGGCTTGTTTCTGGTCAGTT
GTAGCATCAACTCTTTAACATTTTGAATATGTTGGTTGTCCACTTGCTTCATTTCTTGCTCTAA
GATTCAAGCAGAACACCCACTTTTCAACTTTTTTCTTGGCATTAAAATTTGGCGATGAGAAATA
AGCAGCCCACTGCTCCATAATCCATATGATGTAATTATCTTTTGTAGCCTTTTGAATCAGCATG
TAGGTATTGCTAGTTTTGCTTTGTGGGAATATGTAGTGCTAGAGAGTTTTAAATTTCTAGCCTT
TTGAATCAGCATGTAGCCTCATGAAAGTTTCCCCGGCTATACCAAGTTCTGAACATTTGACATG
CAGTTCAACTCATGACCCCAAATGTATATAGCATAACAGTATCCTGATCATGATAAAAGCTTGT
TCATTTTTTATTTGTATAATTGTGAAACAAGCATTAAGGATGAAACAGAGCACCTCTTAGGGAA
GGAGGATGAGATCAGACATATATGGTGAGAGTATTTTGGCAAATTGTTCAACGGGGAGAATGGG
GATACAATCTTTCACTTAGACGACTCTTTTGATGACACCAATATACACTTAGTGCGTAGGACCC
AAGAATTTGAGGTTAGAGGCATTGAAAAGGATGAAAGGGAGTAAGGCGAGGGGCCCTGATGGTT
TCTTAATTGAGACATGGAGACACCTCAAGGACACATTTATAGTAGGGCTAACCAAGTTATTCAA
CCATATCTGCCGATTAAACAAGATGACTAACGAATGGAGAAGTATATTGGTATCGATCTACGAA
AGTAAGGGAGATATTCAAAGTTGTACTAATTATTGGAGAAATTATTTGATTAGCCATACTATGA
AGCTATGGGGGAGAGTTACCGAACATTGTCTGAAAGGAATGATGAGGATATCTATGAACCAATT
TGGTTTCATGCCCGAAAGGTCAACCATGAAAACCATTTTCTTAATAAGACAAGTGATAGGGCAT
TATAGGGAGCAGAAGGACATGCACATGTTTTTCATTGACTTGGAGGATGCTTACAACAGAATAC
TATGGAAATAATGGAATATTATTTGGTGGGCTTTAGAGAAATATAAAATTCCAATGAAGTATGT
TTGACTCATTAAGGACATGTACAACAATGTTGTGACTAGTGTTCAAACAAGTGATGGAGACATA
GATGACTTTTCGATTAGAATAAGATTACATCAAGTATCAGTTTTGACTTTTGAGCCCTTACTTT
TTTCCTTAGTGATGGATAATGTCACAAGGGACATACAAGGGGGTATCACTTCGTGTATGTTTTT
TGCGGATGATGTAGTGCTAGTTGATGAAAGTTGGGTAGGAGTAAATATGAAACTACAAAACTAG
AGTTGTGGTGGGAGACTCTAGAGTCAAAGGTTTTCGACTCGGTAGAACTGAAACTGAATATACA
AGATGTGACTTCAACGTTACTACTCACGAGGAAGGATATGTTAGTTTGGAAGATCAAGTAGTGC
CAAGGATGGATACCTTTCAGTATTTAGGATCAATGCTATAGAAAGATATGGATATTTATGATAT
TAGACGTAGAATCAAAGCAGGGTGGATGAAGTGGTATCAAATGGCGTTCTATATGACTAGAGGC
CAAGTGGGTACCACAGAAGCTAAAAAGACAAGTTTTATAGGACAATGATTAGACCTGCTATGCT
GTATGATACGGAATATCGGTCTACAAAAAGATGACATATTCAATAGAGAAGTTTTGTTGAAATG
CTTATGTTGTGTTGGATCTATGGCCATACAAGAAGGGATCAAGTCCAAAACGATGCTATACATG
GTAGGCTAGAGGTTGCACCAATTGAATTTTTTTTTGTCCAACATCGATTGAGATGGTTTGAACA
TGCCCAATGGAGACCTCCAAGAGGCACCATTGTGTAGTTGAAATTTAAGACATGATAGCAATGA
CCAATGGGAAGATAGATAGAGAGGAAGATCAAGATCAATGTGGGAAGAGGCAGTAAAAGGAGAC
TTGAAGGGTTGGAATATAACTAAAGATTTAGCCTTGAATAAGAGTGCATGAAAAGTAGCTATCC
ACGTGCATGAAGCCATGAACCTTTGAGTTGTGGTTTTTGTTGGGTTTCAACTCTAGCTTACCCC
AACTTGTTTGGAACAAAAAAAGCTTTGATATTGTGAAACAAGCCTTCAAAAATTCTGATGGTTA
AGAAGTGTGCTGTTTATTACGTATCTGTTTATCAGAGTGCATGTCTCATCCAGCTTTTTTAATC
TCTGAAACCAGCAACTCCTCAGTTGATAAATATGCTTGGAAGTTCATATCCAACATCTGGAGGT
TCATTATCACAGAGCCAAATTCAAGCAGGAAATAATTCTTTTAGTTCTATGGGGATGTTGCATG
ATGCCAGTGACACTGCTCCATTTGACATAAATGATTTTCCCCAATTGTCTGGTCGACCTAGTTC
TGCTGGTGGTCCGCAAGGACAATATGGTAAGAATGCTGGAAACTAATATATTTCTTAATTATTA
TTTGGATATTGATTTAGCTAATTTCTTTAAATTACAGGATCACTGCGCAAGCAAGGAGTTGGTG
TTAATACCCTTGTGCAACAAAACCAGGAATTCAGCATTCAAAATGAAGACTTCCCGGCTTTGCC
TGGATATAAAG
						
					

			
		

Sequences
Splice junction sequence	TCACTGCGCAAGCAAGGAGTTGGTGTTAATACCCTTGTGCAACAAAACCAGGAATTCAGCATTC AAAATGAAGACTTCCCGGCTTTGCCTGGATATAAAGgttggaagggtttgctgtatcatgcatt ttttgtggataatcttcattttctcttgagtcaccgattcttttgttgtcttcaaaatgtcggg cttgctga
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 3396 Transcript exons: 179502635-179502736,179503614-179503719,179503812-179503 975,179504155-179507076,179507152-179507253 GTTGGAAGGGTTTGCTGTATCATGCATTTTTTGTGGATAATCTTCATTTTCTCTTGAGTCACCG ATTCTTTTGTTGTCTTCAAAATGTCGGGCTTGCTGAACTCAAACCTTAATAGTTCGGCATCAAA TCTTTCAGACTCAGCTGGAAGGCCATTTACAGCATCCTTTTCGGGTCAATCTGGATCAATTCCA GGTTTTCATCATTCTGGCTTGCATAACACTCATGGAAGTTACAATCTTCCGAGTATGCCTGGAT CACTTGCACAAAGGAATGCTGCCATGAGTGGCCTTCCGTCCTCTGGGGTTCAACAACCTGGAGG TAGCATTCCTGGGAGATTCCCTTCAAACAACCTTCCAGTTGGCATGCCTCAGATTCCTCATGCA CATTCAGGTGTCAGTGGTAGAGGGATGAATTTTGGCGCAGGTCCGGCATTTAGTAGCAGCATGA ATATTGGTGGTAACATCCAAGGCTTATCCTCGGGCTTGGGCTCCGGTGGTAATCGCAATTCTGT TCATGGGATGCCAGTATCTTCATCTATAGGAAACTCGGGTCAACGGATAAGTTCTGTAGGAAAT ATGGTAAGTGCAAGCAATATTGGAAGAAATATAGGCACTGGTGGTTTGTCCGTGCCAAGTATTG CATCACGAATCAATTTGAATGGTAGTGGTGGGAGTGGTAGTCTGAATGTGCAAGGATCCAGTCG AATGATGAATGGATTGCTTCATCAACAAGGTAATTGATTACATGTACCCATAAACAAGTGAAAT GTTATATTTTTTAATAGATTTAGCTGGACTCCATGTGCTATGGTTGGCTGGCTTGTTTCTGGTC AGTTGTAGCATCAACTCTTTAACATTTTGAATATGTTGGTTGTCCACTTGCTTCATTTCTTGCT CTAAGATTCAAGCAGAACACCCACTTTTCAACTTTTTTCTTGGCATTAAAATTTGGCGATGAGA AATAAGCAGCCCACTGCTCCATAATCCATATGATGTAATTATCTTTTGTAGCCTTTTGAATCAG CATGTAGGTATTGCTAGTTTTGCTTTGTGGGAATATGTAGTGCTAGAGAGTTTTAAATTTCTAG CCTTTTGAATCAGCATGTAGCCTCATGAAAGTTTCCCCGGCTATACCAAGTTCTGAACATTTGA CATGCAGTTCAACTCATGACCCCAAATGTATATAGCATAACAGTATCCTGATCATGATAAAAGC TTGTTCATTTTTTATTTGTATAATTGTGAAACAAGCATTAAGGATGAAACAGAGCACCTCTTAG GGAAGGAGGATGAGATCAGACATATATGGTGAGAGTATTTTGGCAAATTGTTCAACGGGGAGAA TGGGGATACAATCTTTCACTTAGACGACTCTTTTGATGACACCAATATACACTTAGTGCGTAGG ACCCAAGAATTTGAGGTTAGAGGCATTGAAAAGGATGAAAGGGAGTAAGGCGAGGGGCCCTGAT GGTTTCTTAATTGAGACATGGAGACACCTCAAGGACACATTTATAGTAGGGCTAACCAAGTTAT TCAACCATATCTGCCGATTAAACAAGATGACTAACGAATGGAGAAGTATATTGGTATCGATCTA CGAAAGTAAGGGAGATATTCAAAGTTGTACTAATTATTGGAGAAATTATTTGATTAGCCATACT ATGAAGCTATGGGGGAGAGTTACCGAACATTGTCTGAAAGGAATGATGAGGATATCTATGAACC AATTTGGTTTCATGCCCGAAAGGTCAACCATGAAAACCATTTTCTTAATAAGACAAGTGATAGG GCATTATAGGGAGCAGAAGGACATGCACATGTTTTTCATTGACTTGGAGGATGCTTACAACAGA ATACTATGGAAATAATGGAATATTATTTGGTGGGCTTTAGAGAAATATAAAATTCCAATGAAGT ATGTTTGACTCATTAAGGACATGTACAACAATGTTGTGACTAGTGTTCAAACAAGTGATGGAGA CATAGATGACTTTTCGATTAGAATAAGATTACATCAAGTATCAGTTTTGACTTTTGAGCCCTTA CTTTTTTCCTTAGTGATGGATAATGTCACAAGGGACATACAAGGGGGTATCACTTCGTGTATGT TTTTTGCGGATGATGTAGTGCTAGTTGATGAAAGTTGGGTAGGAGTAAATATGAAACTACAAAA CTAGAGTTGTGGTGGGAGACTCTAGAGTCAAAGGTTTTCGACTCGGTAGAACTGAAACTGAATA TACAAGATGTGACTTCAACGTTACTACTCACGAGGAAGGATATGTTAGTTTGGAAGATCAAGTA GTGCCAAGGATGGATACCTTTCAGTATTTAGGATCAATGCTATAGAAAGATATGGATATTTATG ATATTAGACGTAGAATCAAAGCAGGGTGGATGAAGTGGTATCAAATGGCGTTCTATATGACTAG AGGCCAAGTGGGTACCACAGAAGCTAAAAAGACAAGTTTTATAGGACAATGATTAGACCTGCTA TGCTGTATGATACGGAATATCGGTCTACAAAAAGATGACATATTCAATAGAGAAGTTTTGTTGA AATGCTTATGTTGTGTTGGATCTATGGCCATACAAGAAGGGATCAAGTCCAAAACGATGCTATA CATGGTAGGCTAGAGGTTGCACCAATTGAATTTTTTTTTGTCCAACATCGATTGAGATGGTTTG AACATGCCCAATGGAGACCTCCAAGAGGCACCATTGTGTAGTTGAAATTTAAGACATGATAGCA ATGACCAATGGGAAGATAGATAGAGAGGAAGATCAAGATCAATGTGGGAAGAGGCAGTAAAAGG AGACTTGAAGGGTTGGAATATAACTAAAGATTTAGCCTTGAATAAGAGTGCATGAAAAGTAGCT ATCCACGTGCATGAAGCCATGAACCTTTGAGTTGTGGTTTTTGTTGGGTTTCAACTCTAGCTTA CCCCAACTTGTTTGGAACAAAAAAAGCTTTGATATTGTGAAACAAGCCTTCAAAAATTCTGATG GTTAAGAAGTGTGCTGTTTATTACGTATCTGTTTATCAGAGTGCATGTCTCATCCAGCTTTTTT AATCTCTGAAACCAGCAACTCCTCAGTTGATAAATATGCTTGGAAGTTCATATCCAACATCTGG AGGTTCATTATCACAGAGCCAAATTCAAGCAGGAAATAATTCTTTTAGTTCTATGGGGATGTTG CATGATGCCAGTGACACTGCTCCATTTGACATAAATGATTTTCCCCAATTGTCTGGTCGACCTA GTTCTGCTGGTGGTCCGCAAGGACAATATGGATCACTGCGCAAGCAAGGAGTTGGTGTTAATAC CCTTGTGCAACAAAACCAGGAATTCAGCATTCAAAATGAAGACTTCCCGGCTTTGCCTGGATAT AAAG
Genomic sequence	GTTGGAAGGGTTTGCTGTATCATGCATTTTTTGTGGATAATCTTCATTTTCTCTTGAGTCACCG ATTCTTTTGTTGTCTTCAAAATGTCGGGCTTGCTGAACGTATGTACTTGCACAAGTATACTTGC CATTGGGTTTTCTTGCCACCATTATGTATTCATGTTGAAAGGCAGGCCTGGTGTAGTGGTGAGA GCTGTATCACTGAGTCACTAGGTCATGTGTTTGAAGCAGCCTCCGCATTTGTGGGGGAAGGATT GCTTCGATTTACCCCTTTTTCAGACCCCACTCATGCGGGACCCTCCAGCACTTGGTCTGCCCAT TATGTATTTATATTCTTTCCATTTGTTTACCACATTGGGTCTAGAATGGATGTTTTTCTTTGGT GAAAGATAAATTTCTACAACTTTAGTCGTCAGCAGACAAATCTTTTTAGAGATTTCATGCAAGA GTTATATGAATGGAATCATCATCAAAACTACATTGCCAGTTGTCACAACAATATTTGTAATGTT CGATATATGTTACTTATATTAGGTGAAGTCAAATTTGGGCACTGTTAGACAGCCATATTTTTAA TGTTTGATATACTCCCTATGTCTTTTTGCCTGTTATGGCATTGTACTGTGGTCCACTTCGGACC TTTCTCTCTTTCAATATAATGATGCACAGTTCTCCTGCGCGTTCGAGAAAAAAAATGTTTGATA TACGGTACTTGTATTAGGTGGCAGTAAAGTTTGTGCACTGAGACTGTACCAACAGTTAAATCAG GGAAGATGTATTGTTTTGTTGTGATCTGGTAGGTCATTTGCTTGTTTGTACACTCCTTTTTTTT GTGGACAACAAATGAGTATTACATCTTGAACTCTTTGATGACTATCTCCTACTCAAACGTCTTT AGGGGCCTGCTTATCTCAATATGGTTTGCAGTCTTAACTCAATATTATGTTTATTTTTTACTAA CTCATTTTTTCCTTGGCAGTCAAACCTTAATAGTTCGGCATCAAATCTTTCAGACTCAGCTGGA AGGCCATTTACAGCATCCTTTTCGGGTCAATCTGGATCAATTCCAGGTTTTCATCATTCTGGTG AGCATATATATAATACAAAAACTTTTGTTAGTTCATTTATACTACATGGCAGACATTAAGTAAG GTTTGTTTTCCTGACATTTTCAAAGGCTTGCATAACACTCATGGAAGTTACAATCTTCCGAGTA TGCCTGGATCACTTGCACAAAGGAATGCTGCCATGAGTGGCCTTCCGTCCTCTGGGGTTCAACA ACCTGGAGGTAGCATTCCTGGGAGATTCCCTTCAAACAACCTTCCAGTTGGCATGCCTCAGGTT CTAATGCTCACCTTTATTCATATAGTGCAATTCATTTCCTTATTTGGTGGTAAACATACATGTT CACTTTAATGTCTTATGGGATCCGAGAACCAATTTTTATAATTCAAATGTATGTGTTCTCTGTC TGCACATCCATGTGGAGCAAGATGATTTATTGTGTGGTCCCTTTGCAGATTCCTCATGCACATT CAGGTGTCAGTGGTAGAGGGATGAATTTTGGCGCAGGTCCGGCATTTAGTAGCAGCATGAATAT TGGTGGTAACATCCAAGGCTTATCCTCGGGCTTGGGCTCCGGTGGTAATCGCAATTCTGTTCAT GGGATGCCAGTATCTTCATCTATAGGAAACTCGGGTCAACGGATAAGTTCTGTAGGAAATATGG TAAGTGCAAGCAATATTGGAAGAAATATAGGCACTGGTGGTTTGTCCGTGCCAAGTATTGCATC ACGAATCAATTTGAATGGTAGTGGTGGGAGTGGTAGTCTGAATGTGCAAGGATCCAGTCGAATG ATGAATGGATTGCTTCATCAACAAGGTAATTGATTACATGTACCCATAAACAAGTGAAATGTTA TATTTTTTAATAGATTTAGCTGGACTCCATGTGCTATGGTTGGCTGGCTTGTTTCTGGTCAGTT GTAGCATCAACTCTTTAACATTTTGAATATGTTGGTTGTCCACTTGCTTCATTTCTTGCTCTAA GATTCAAGCAGAACACCCACTTTTCAACTTTTTTCTTGGCATTAAAATTTGGCGATGAGAAATA AGCAGCCCACTGCTCCATAATCCATATGATGTAATTATCTTTTGTAGCCTTTTGAATCAGCATG TAGGTATTGCTAGTTTTGCTTTGTGGGAATATGTAGTGCTAGAGAGTTTTAAATTTCTAGCCTT TTGAATCAGCATGTAGCCTCATGAAAGTTTCCCCGGCTATACCAAGTTCTGAACATTTGACATG CAGTTCAACTCATGACCCCAAATGTATATAGCATAACAGTATCCTGATCATGATAAAAGCTTGT TCATTTTTTATTTGTATAATTGTGAAACAAGCATTAAGGATGAAACAGAGCACCTCTTAGGGAA GGAGGATGAGATCAGACATATATGGTGAGAGTATTTTGGCAAATTGTTCAACGGGGAGAATGGG GATACAATCTTTCACTTAGACGACTCTTTTGATGACACCAATATACACTTAGTGCGTAGGACCC AAGAATTTGAGGTTAGAGGCATTGAAAAGGATGAAAGGGAGTAAGGCGAGGGGCCCTGATGGTT TCTTAATTGAGACATGGAGACACCTCAAGGACACATTTATAGTAGGGCTAACCAAGTTATTCAA CCATATCTGCCGATTAAACAAGATGACTAACGAATGGAGAAGTATATTGGTATCGATCTACGAA AGTAAGGGAGATATTCAAAGTTGTACTAATTATTGGAGAAATTATTTGATTAGCCATACTATGA AGCTATGGGGGAGAGTTACCGAACATTGTCTGAAAGGAATGATGAGGATATCTATGAACCAATT TGGTTTCATGCCCGAAAGGTCAACCATGAAAACCATTTTCTTAATAAGACAAGTGATAGGGCAT TATAGGGAGCAGAAGGACATGCACATGTTTTTCATTGACTTGGAGGATGCTTACAACAGAATAC TATGGAAATAATGGAATATTATTTGGTGGGCTTTAGAGAAATATAAAATTCCAATGAAGTATGT TTGACTCATTAAGGACATGTACAACAATGTTGTGACTAGTGTTCAAACAAGTGATGGAGACATA GATGACTTTTCGATTAGAATAAGATTACATCAAGTATCAGTTTTGACTTTTGAGCCCTTACTTT TTTCCTTAGTGATGGATAATGTCACAAGGGACATACAAGGGGGTATCACTTCGTGTATGTTTTT TGCGGATGATGTAGTGCTAGTTGATGAAAGTTGGGTAGGAGTAAATATGAAACTACAAAACTAG AGTTGTGGTGGGAGACTCTAGAGTCAAAGGTTTTCGACTCGGTAGAACTGAAACTGAATATACA AGATGTGACTTCAACGTTACTACTCACGAGGAAGGATATGTTAGTTTGGAAGATCAAGTAGTGC CAAGGATGGATACCTTTCAGTATTTAGGATCAATGCTATAGAAAGATATGGATATTTATGATAT TAGACGTAGAATCAAAGCAGGGTGGATGAAGTGGTATCAAATGGCGTTCTATATGACTAGAGGC CAAGTGGGTACCACAGAAGCTAAAAAGACAAGTTTTATAGGACAATGATTAGACCTGCTATGCT GTATGATACGGAATATCGGTCTACAAAAAGATGACATATTCAATAGAGAAGTTTTGTTGAAATG CTTATGTTGTGTTGGATCTATGGCCATACAAGAAGGGATCAAGTCCAAAACGATGCTATACATG GTAGGCTAGAGGTTGCACCAATTGAATTTTTTTTTGTCCAACATCGATTGAGATGGTTTGAACA TGCCCAATGGAGACCTCCAAGAGGCACCATTGTGTAGTTGAAATTTAAGACATGATAGCAATGA CCAATGGGAAGATAGATAGAGAGGAAGATCAAGATCAATGTGGGAAGAGGCAGTAAAAGGAGAC TTGAAGGGTTGGAATATAACTAAAGATTTAGCCTTGAATAAGAGTGCATGAAAAGTAGCTATCC ACGTGCATGAAGCCATGAACCTTTGAGTTGTGGTTTTTGTTGGGTTTCAACTCTAGCTTACCCC AACTTGTTTGGAACAAAAAAAGCTTTGATATTGTGAAACAAGCCTTCAAAAATTCTGATGGTTA AGAAGTGTGCTGTTTATTACGTATCTGTTTATCAGAGTGCATGTCTCATCCAGCTTTTTTAATC TCTGAAACCAGCAACTCCTCAGTTGATAAATATGCTTGGAAGTTCATATCCAACATCTGGAGGT TCATTATCACAGAGCCAAATTCAAGCAGGAAATAATTCTTTTAGTTCTATGGGGATGTTGCATG ATGCCAGTGACACTGCTCCATTTGACATAAATGATTTTCCCCAATTGTCTGGTCGACCTAGTTC TGCTGGTGGTCCGCAAGGACAATATGGTAAGAATGCTGGAAACTAATATATTTCTTAATTATTA TTTGGATATTGATTTAGCTAATTTCTTTAAATTACAGGATCACTGCGCAAGCAAGGAGTTGGTG TTAATACCCTTGTGCAACAAAACCAGGAATTCAGCATTCAAAATGAAGACTTCCCGGCTTTGCC TGGATATAAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.145954776

Conservation Information
Conserved circRNAs	NA
PMCS	0.145954776

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							179507018-179502688(+)
179506891-179503621(+)
179502663-179507211(-)
179502683-179507156(-)
						
						Potential amino acid sequence
						
							MIFPNCLVDLVLLVVRKDNMDHCASKELVLIPLCNKTRNSAFKMKTSRLCLDIKVGRVCCIMHF
LWIIFIFS*(+)
MLGSSYPTSGGSLSQSQIQAGNNSFSSMGMLHDASDTAPFDINDFPQLSGRPSSAGGPQGQYGS
LRKQGVGVNTLVQQNQEFSIQNEDFPALPGYKGWKGLLYHAFFVDNLHFLLSHRFFCCLQNVGL
AELKP*(+)
MHDTANPSNLYIQAKPGSLHFEC*(-)
MKIIHKKCMIQQTLPTFISRQSREVFILNAEFLVLLHKGINTNSLLAQ*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to drought stress

Functional Information
Coding potential	Y
Potential coding position	179507018-179502688(+) 179506891-179503621(+) 179502663-179507211(-) 179502683-179507156(-)
Potential amino acid sequence	MIFPNCLVDLVLLVVRKDNMDHCASKELVLIPLCNKTRNSAFKMKTSRLCLDIKVGRVCCIMHF LWIIFIFS(+) MLGSSYPTSGGSLSQSQIQAGNNSFSSMGMLHDASDTAPFDINDFPQLSGRPSSAGGPQGQYGS LRKQGVGVNTLVQQNQEFSIQNEDFPALPGYKGWKGLLYHAFFVDNLHFLLSHRFFCCLQNVGL AELKP(+) MHDTANPSNLYIQAKPGSLHFEC(-) MKIIHKKCMIQQTLPTFISRQSREVFILNAEFLVLLHKGINTNSLLAQ(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to drought stress

			
						 Other Information
					
						References
						Han et al., 2020;Zhang et al., 2019

circRNA

Detail information of Zm00001d052098_circ_g.2

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