Detailed infomation of each circRNA
General Information | |
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CircRNA Name | GLYMA_13G117700_circ_g.5 |
ID in PlantcircBase | gma_circ_003497 |
Alias | Gm13ciRNA1116 |
Organism | Glycine max |
Position | chr13: 23083959-23084328 JBrowse» |
Reference genome | v2.0.38 |
Type | u-circRNA |
Identification method | Tophat |
Parent gene | GLYMA_13G117700 |
Parent gene annotation |
hypothetical protein |
Parent gene strand | - |
Alternative splicing | GLYMA_13G117700_circ_g.1 GLYMA_13G117700_circ_ag.1 GLYMA_13G117700_circ_ag.2 GLYMA_13G117700_circ_ag.3 GLYMA_13G117700_circ_ag.4 GLYMA_13G117700_circ_ag.6 GLYMA_13G117700_circ_ag.7 GLYMA_13G117900_circ_g.1 GLYMA_13G117900_circ_g.2 GLYMA_13G117900_circ_g.3 |
Support reads | NA |
Tissues | root |
Exon boundary | No-No |
Splicing signals | CT-AT |
Number of exons covered | KRH19452:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.085544212 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhao et al., 2017a |