Detailed infomation of each circRNA
General Information | |
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CircRNA Name | BGIOSGA008290_circ_ig.1 |
ID in PlantcircBase | osi_circ_011785 |
Alias | Chr02:19029881_19030287(MH63RS2) |
Organism | Oryza sativa ssp. indica |
Position | chr2: 19575624-19576030 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | ig-circRNA |
Identification method | CIRI2 |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | BGIOSGA006382_circ_igg.1 BGIOSGA008282_circ_ig.1 BGIOSGA008282_circ_ig.2 BGIOSGA008287_circ_g.1 BGIOSGA008288_circ_g.1 BGIOSGA008289_circ_g.1 BGIOSGA008289_circ_g.2 BGIOSGA008296_circ_igg.1 BGIOSGA008296_circ_igg.2 BGIOSGA006402_circ_g.1 BGIOSGA008297_circ_g.1 BGIOSGA008298_circ_g.1 BGIOSGA006383_circ_ig.1 BGIOSGA006382_circ_g.1 |
Support reads | NA |
Tissues | root, leaf, panicle |
Exon boundary | NA-NA |
Splicing signals | GT-CA |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | osa_circ_014753 |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhou et al., 2021 |