Splice junction sequence |
TGTGGTCAACATCACATAATAACCGGCAAATGAGATCCCTTGCTTCAGGAGACACCTTTGAATC CTCTGGAAATTTCAAATGGTTTCTCCAGTGGACAATctgaatgtttcaatcctttcacagcatc aaagtttttgtacgtatatcccacaaagctgaggtctttggaattcagcatcatctgtaaaatg gtttcaca
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 373 Transcript exons: 4622722-4622803,4623238-4623282,4626224-4626337,4626430- 4626561 CTGAATGTTTCAATCCTTTCACAGCATCAAAGTTTTTGTACGTATATCCCACAAAGCTGAGGTC TTTGGAATTCAGCATCATCTTTCTTGAGGGCCCGGAACCTGTTCTGGTTGGAGCATTATCCATT TCCTCAAACTTCATGAAGTTCTGTGTGTCCAGTTCATCATTTACTTGAGGCTTAAATGCAGCTT CCATCTCATATAGTTTTTCCCAAGCAACTCCACGGAACCAAGGATGTGCCTTTATTTGGTCTGC TCCTGCACTGCCAATCCTGTGGTCAACATCACATAATAACCGGCAAATGAGATCCCTTGCTTCA GGAGACACCTTTGAATCCTCTGGAAATTTCAAATGGTTTCTCCAGTGGACAAT
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Genomic sequence |
CTGAATGTTTCAATCCTTTCACAGCATCAAAGTTTTTGTACGTATATCCCACAAAGCTGAGGTC TTTGGAATTCAGCATCATCTGTAAAATGGTTTCACAAAAATCAGGTATGAACTTGGAGAGAACA AAGAGAAACATAAATTTGTACTTGAACACAAATTCTACACCAAGTTAGGTGACTTAAAACTACT CTTTGCAAACACTATTATGACCATTGGTCAGTTAATTAGTCTTCCGGGTAGGTGACAGTGGGTC AAGGCGTTAGGCACAAAAATATATGCATAGCAGGTCGATTTTGTGGTTAAGCAGGCCTAAATAT GGACAACCCTTTGCGTTTCTTATCAAATTATGATGGGTTCTGGAAAATCATAATTCAGTGGAAT ATAAACACAGGGAAATAACTCAGCAGCCTAGAGCCCTACATATGAAGTTATGATGGAAAAGCAA TTTTCAAGCAGTAAAAACACAATGGTCACTCTGCATTTAAACTACATAGCGAATTTCAAAGTTC ATACCTTTCTTGAGGGCCCGGAACCTGTTCTGGTTGGAGCATTATCCATCTGCAGCAGACAGTT CAGTTAGTTAAGACAGAGGAATGAAAAATATAGGCAAAACACATAGGTAGGAGAGAAAAAAATG TAGTGCAACACATGGAAGGATGAAAATTAGACATTCCAATTTAACAAGCAGACTAGAAACAATA ACATATTCTGCCCAAGTGCTCACATGCAAACATAGATCCCTTGAACAAGAAAATGAGAAAAAAA AGTCCACTGACTTGAATTAACAAAAATCCAAGAGTAAACCCATAGCTTGTACTCCACAATCGTT GTGCGTATAAATTGTTTGAGGCTCTGCACAATCCTTGTGCATATTATACGGTACTCAAGGAGAC GTTGAGTCTCTATATGCACAGGAGTATATGAACATTGCTGCATGCATCTGTTTTGGTAGCGGCG AGACGCAATCATGCAGTGATGTGGGCGCATGTGGAGCTGGTGCGAGAGTTTCCCTGGGCACGGG GAGGGTGCAACAGGCGAACAGCCATGCGCGCGTGGCACATGCAAGGGAAACTGAATCCTTGTGC GGCTTGTTCGATGCGCTCCTTGGTATCGCTGTAAATAAATTATACGCACAACGATCTTGGATGG AGGAAGTAACTGACACAATGGAAACTTCCTCTAAAACCAAAAAAAGAAGTCAATTTGGTCTTTC AAGTTTCGTCCTGAGATCAATTTGGGTCAATAAGATCGCTGAGCCCACCTAAGTACCTAACCCT CCATGCAGGCAAGATAACTCAGCAAGGCCAGCCCTAGTTGAAAGACCCAAGGCAAGAGTGTTTT GCCCCTATATCTTCGATTGAAAAGAAAAAACAATGATGGTAAAACCGTAAAAGGAGCCAGACCA TGGTTTTTTTATTCTTAAATAGTGTGATGGTAGAATAGACTTTTCACCATTGAAATTCCCACTA AGGCTAAAGTTCCGCTTATCTTGCTAACATTGGGACCAAGGACCATATTGACCCAAAAAGTATA ATTCAAGTAGTGAGTTGGCCAAAATGAAACATTTTTGGGGTCATTGACCCTCAAACGAAAATTG GACAGAATGAGCTGTTCTCACAAATCCCTACAACGACTCAAATAGTAATCACAAGGTCAAATTG TGGCTTGGTGTCATGTCAACTCTAATTACCAATCTAGTGAAGGCTGACCTCTGTTGATCCATCT ATACTATCATGTAGCAGCTTAGGCAGATACGTGGATTCCTGACCGTCCGATCATTCGATTCAAT GGCCCAAATAAAAAGTGTGATTCACACCACATCCGCGCGCATCCACTTCCGCCTCGCACACCAC GCCCGCACATTCGTCCCCTGCCTCGATCGCGCTCGTACATCTCTCCACTGCCTCACGCATCGTC TGCCACCATCGTTGTCCCCCATCACCGCACGGAACTCGACCTCACTGCCCTCCCCGGACCTCCC CCGCTGTGGTGCGCGTCCTCGCCACCCACCCCAGCCCGCCCTCAGCGTTCAACCTCGCTGCCCT CCCCAGACCTCCCCTGCTCTGGCGCACGAATGCACGTCCTGGCCCTCCCATCGTTGTGGATTCG CTCCTCTCCGCATCCCTGACCTCGGCCACACCCAATGATTCGATCTGGATATAATGGATCTGGA TGATGTGCATAAGAGAGGTAATTTTGAGGTTTGTATTGCAGTACGAGGTAATTTTTGGATCATA ATTAAATTCAGCATGTTGACTGTATGTGTGCTAGGTGGAAGATTTTTTTGTACTTGCAAAATTC TGGTGTCAATTTTGAATCGCATTATAATTCGTGCTATATACTGTTTGATAAGTTGGCCAGATCT AGGTCTTCAGGATGGTATGATTTAGCAGATGCTTCATAGTTGCTGGATTTAAAACCAGTTCTAT GCTAATTTTAGATCAAATATTGGTCATATATAGTAGGTTGTCTGAAACAGTACAACAATATAAA GAGCTTCAAATTTTAAATTGATTTCACAAAACTTTTTTATCAGGAAATTAACTGCCAATTGCCA TTTTTTTCTATGTTATTTGACGGCAAATTTCAATTTGTTTGCTGTTTGGTCTAACTGCATAACA AGTTACTCGACGTCTTTCCGCTCTTATCTCGATTTCATCTGGTGCCTGTGAGCAGTGGCAGACG CTGGATTTCAAAACCGAGTATTCACTTAACAATTGCAAGTGCTGTGTCCCCAATGTTTACTGGG ATAGAGTTATGGGACTTGAGATAGTTGGCTACTTGGTTAGAAGTGGTGCGAGCCAGGAGTCTAG AAAAATGGATCTGTTGAGGGAAAAAAGGATCGAGATTGAAGTGTTAGATACAATTGAATATATA CATATGTGATATACCTATATATATTATTTTTGTTTCACAAATTTTTGGGTATTCCCGGGAACCC TCCTGCATCCGCCCCTACATGTGAGCACTCTATATCTTCACTTCGGTTGCTTTTTATTTCAATC ATGTTCTTACCAGCAAAGTCCTTATTTACTGGAAATTGTCATGTATCTATTGTGCATGTTCCTG AAGGATGTTGAGTGAATTTGTATTCCATTGTATAATCTCAAACGGAAGTATTGAGCATTTGATG TACATACTAATTGCACTAATACGAACACAATTTGTGTCAGATGATGAATCCAAGAATTTTAATT TGATTTATTTGGAACAATTTGGCAAGTTTAATTTTTAGTATTTGCCAGAGATAACATGTCTGGG GTAATTCATATTGACTTTTACGTGCGTTGCACGTGCACGTTTACTAGTTTATAATAGTTTGGAT CAAGACTTATCTCGATATCTTTTTTTTAAAAGAATTATCTCAATATATTGCAATCCCCGTAATT CTAAATCAAGGCAATACCCAAGTATTGGCTGGAGCTTGGCAACTTTGAACCTTGCAGAATTGCA GAGGCATAAGATAACCATTACACTAAGAGCAAAAGGAATCACTTACTTCCTCAAACTTCATGAA GTTCTGTGTGTCCAGTTCATCATTTACTTGAGGCTTAAATGCAGCTTCCATCTCATATAGTTTT TCCCAAGCAACTCCACGGAACCAAGGATGTGCCTAGTGATAAACAAATGACTAGTAAATACAGG ACAAGCAAACAAGACAAGAACTGCAAATGATACTATTTATTTCTCTTATGTGCCAAGTACCTTT ATTTGGTCTGCTCCTGCACTGCCAATCCTGTGGTCAACATCACATAATAACCGGCAAATGAGAT CCCTTGCTTCAGGAGACACCTTTGAATCCTCTGGAAATTTCAAATGGTTTCTCCAGTGGACAAT |