Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d019283_circ_g.1 |
ID in PlantcircBase | zma_circ_002471 |
Alias | circ1155 |
Organism | Zea mays |
Position | chr7: 25501037-25502971 JBrowse» |
Reference genome | AGPv4.38 |
Type | ei-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d019283 |
Parent gene annotation |
Calreticulin |
Parent gene strand | - |
Alternative splicing | Zm00001d019283_circ_g.2 Zm00001d019283_circ_g.3 |
Support reads | 3 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d019283_T007:10 Zm00001d019283_T009:10 Zm00001d019283_T001:4 Zm00001d019283_T003:9 Zm00001d019283_T006:5 Zm00001d019283_T010:9 Zm00001d019283_T008:10 Zm00001d019283_T002:8 Zm00001d019283_T004:10 Zm00001d019283_T005:10 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.018005693 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |