Detailed infomation of each circRNA
General Information | |
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CircRNA Name | orai.001G206400_circ_g.2 |
ID in PlantcircBase | gra_circ_000093 |
Alias | Chr01:40454353|40454524 |
Organism | Gossypium raimondii |
Position | chrChr01: 40454353-40454524 JBrowse» |
Reference genome | Graimondii_221 |
Type | e-circRNA |
Identification method | CIRI |
Parent gene | Gorai.001G206400 |
Parent gene annotation | NA |
Parent gene strand | - |
Alternative splicing | orai.001G206400_circ_g.1 |
Support reads | 3 |
Tissues | leaf |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | Gorai.001G206400.1:1 |
Conservation Information | |
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Conserved circRNAs |
ath_circ_032755 ath_circ_032746 ath_circ_032764* ath_circ_032739* ath_circ_032775* ath_circ_032782* ath_circ_032783* ath_circ_032774* ath_circ_032798 ath_circ_032784* ath_circ_032802* ath_circ_032790* ath_circ_032803* ath_circ_032792 ath_circ_032799 ath_circ_032800 ath_circ_032808 ath_circ_032807 |
PMCS | 1.258732413 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhao et al., 2017b |