Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d021846_circ_g.2 |
ID in PlantcircBase | zma_circ_002597 |
Alias | circ1219 |
Organism | Zea mays |
Position | chr7: 164393580-164401123 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d021846 |
Parent gene annotation |
Insulin-degrading enzyme-like 1 peroxisomal |
Parent gene strand | - |
Alternative splicing | Zm00001d021846_circ_g.1 Zm00001d021846_circ_g.3 Zm00001d021846_circ_g.4 |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-AA |
Number of exons covered | Zm00001d021846_T007:13 Zm00001d021846_T016:12 Zm00001d021846_T004:11 Zm00001d021846_T023:10 Zm00001d021846_T021:12 Zm00001d021846_T006:13 Zm00001d021846_T001:4 Zm00001d021846_T008:12 Zm00001d021846_T010:12 Zm00001d021846_T002:12 Zm00001d021846_T012:11 Zm00001d021846_T015:12 Zm00001d021846_T020:9 Zm00001d021846_T005:1 Zm00001d021846_T018:13 Zm00001d021846_T013:12 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.000795334 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |