Detailed infomation of each circRNA
General Information | |
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CircRNA Name | BGIOSGA016280_circ_g.3 |
ID in PlantcircBase | osi_circ_014298 |
Alias | Chr04:19647229_19647691(MH63RS2), Chr04:19620220_19620682(ZS97RS2) |
Organism | Oryza sativa ssp. indica |
Position | chr4: 16776809-16777271 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | ei-circRNA |
Identification method | CIRI2, CIRCexplorer2, CIRI2 |
Parent gene | BGIOSGA016280 |
Parent gene annotation | NA |
Parent gene strand | + |
Alternative splicing | BGIOSGA016280_circ_g.1 BGIOSGA016280_circ_g.2 |
Support reads | NA |
Tissues | root, leaf, panicle |
Exon boundary | No-Yes |
Splicing signals | GT-TA |
Number of exons covered | BGIOSGA016280-TA:2 |
Conservation Information | |
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Conserved circRNAs | osa_circ_023622 zma_circ_001066 |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhou et al., 2021 |