Splice junction sequence |
TGAGACAATACCTGTTTCCACAATTTACAAGCCCCCTAGGTGATAAATCAAACACTTCACACTG AAAGAATTTAAGAAATTCCTCGTATGGAAAAAGCATcttaagaactcatgagcatcttcctgac tcccatcaccaatctgacaatttatacttcgcatgtgtgagagaattctgctagcagaaagtgg acctccgg
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 338 Transcript exons: 5847557-5847719,5847810-5847895,5848031-5848119 CTTAAGAACTCATGAGCATCTTCCTGACTCCCATCACCAATCTGACAATTTATACTTCGCATGT GTGAGAGAATTCTGCTAGCAGAAAGTGGACCTCCGGATTCTCTTAGCATCATTACATGTTGCTC AAGTTCACACATAAGGCACCAATCTTTCCCAGAACATGATCTTGAATGTGATCGTCGAAGCAAA TAAGCAACGAGTGGTTTTGTACATGTTAAGGATTGCAAAACAGCGTTCGCATAGCAACTGTTTC CACAATTTACAAGCCCCCTAGGTGATAAATCAAACACTTCACACTGAAAGAATTTAAGAAATTC CTCGTATGGAAAAAGCAT
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Genomic sequence |
CTTAAGAACTCATGAGCATCTTCCTGACTCCCATCACCAATCTGACAATTTATACTTCGCATGT GTGAGAGAATTCTGCTAGCAGAAAGTGGACCTCCGGATTCTCTTAGCATCATTACATGTTGCTC AAGTTCACACATAAGGCACCAATCTTTCCCAGAACCTATAGCGAAAGAATAACATAGTTTAGTC AGACGAAGTAAACTAAATCTGCAAAACTTTATGCTACGAGATTAATTGGGAAAAGCATTACATG ATCTTGAATGTGATCGTCGAAGCAAATAAGCAACGAGTGGTTTTGTACATGTTAAGGATTGCAA AACAGCGTTCGCATAGCAACTGGAGAAGAAAGATGATAGTAAATTTAGAAAGTATATAAATCAG TAAGGACATATATACAAAATGGATCTTGCTATTATAAAAGCAATCCTTAATTCTGTAGATTAAC AGAATGAAAAGTAATTGAGACAATACCTGTTTCCACAATTTACAAGCCCCCTAGGTGATAAATC AAACACTTCACACTGAAAGAATTTAAGAAATTCCTCGTATGGAAAAAGCAT |