Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d038587_circ_g.3 |
ID in PlantcircBase | zma_circ_002385 |
Alias | circ2032 |
Organism | Zea mays |
Position | chr6: 160557236-160559225 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d038587 |
Parent gene annotation |
Protein FRIGIDA-ESSENTIAL 1 |
Parent gene strand | - |
Alternative splicing | Zm00001d038587_circ_g.1 Zm00001d038587_circ_g.2 |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d038587_T031:3 Zm00001d038587_T007:3 Zm00001d038587_T004:2 Zm00001d038587_T028:3 Zm00001d038587_T003:2 Zm00001d038587_T035:3 Zm00001d038587_T005:2 Zm00001d038587_T020:3 Zm00001d038587_T026:3 Zm00001d038587_T033:2 Zm00001d038587_T008:3 Zm00001d038587_T002:3 Zm00001d038587_T034:2 Zm00001d038587_T025:3 Zm00001d038587_T017:3 Zm00001d038587_T032:3 Zm00001d038587_T030:3 Zm00001d038587_T011:3 Zm00001d038587_T023:3 Zm00001d038587_T009:2 Zm00001d038587_T016:1 Zm00001d038587_T010:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.033333338 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |