Splice junction sequence |
GGTGCCGTACACGAACACCATTGTCGCCGCCTCCACTCCTCCCCCTCCATTGCTCAATTTCTGC TCCACTGGAGTTTGGACGCTCCTCATCTTTACTCACttggccgcgtgttccatggtatactcgc cgatctcagctgcctcgccaccgcagcgcagccacagggcctccatgtagctcgtgtgtgcgaa ataggcct
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 217 Transcript exons: 1842847-1842881,1843251-1843432 TTGGCCGCGTGTTCCATGGTATACTCGCCGATCTCCCGGGGTGGCGGTGGAGGCAGCACCAACC AAGGGGGAACCGGAGGCGGCGAGGAGAGGGTGGTTGGGGAAACCACGCTTCAGGGTGCCGTACA CGAACACCATTGTCGCCGCCTCCACTCCTCCCCCTCCATTGCTCAATTTCTGCTCCACTGGAGT TTGGACGCTCCTCATCTTTACTCAC
Transcript length: 228 Transcript exons: 1842847-1843026,1843385-1843432 TTGGCCGCGTGTTCCATGGTATACTCGCCGATCTCAGCTGCCTCGCCACCGCAGCGCAGCCACA GGGCCTCCATGTAGCTCGTGTGTGCGAAATAGGCCTCCGCCTCCACTACCTCTCCTGATCCTCC CTCAACTACCACGGTCACTTTGCGCCGCTCATACACACCCAGGTGGGTGCCCCTCAATTTCTGC TCCACTGGAGTTTGGACGCTCCTCATCTTTACTCAC
Transcript length: 279 Transcript exons: 1842847-1842960,1843251-1843351,1843369-1843432 TTGGCCGCGTGTTCCATGGTATACTCGCCGATCTCAGCTGCCTCGCCACCGCAGCGCAGCCACA GGGCCTCCATGTAGCTCGTGTGTGCGAAATAGGCCTCCGCCTCCACTACCCCGGGGTGGCGGTG GAGGCAGCACCAACCAAGGGGGAACCGGAGGCGGCGAGGAGAGGGTGGTTGGGGAAACCACGCT TCAGGGTGCCGTACACGAACACCTCCTCCCCCTCCATTGCTCAATTTCTGCTCCACTGGAGTTT GGACGCTCCTCATCTTTACTCAC
Transcript length: 288 Transcript exons: 1842847-1843023,1843322-1843432 TTGGCCGCGTGTTCCATGGTATACTCGCCGATCTCAGCTGCCTCGCCACCGCAGCGCAGCCACA GGGCCTCCATGTAGCTCGTGTGTGCGAAATAGGCCTCCGCCTCCACTACCTCTCCTGATCCTCC CTCAACTACCACGGTCACTTTGCGCCGCTCATACACACCCAGGTGGGTGCCACGCTTCAGGGTG CCGTACACGAACACCATTGTCGCCGCCTCCACTCCTCCCCCTCCATTGCTCAATTTCTGCTCCA CTGGAGTTTGGACGCTCCTCATCTTTACTCAC
Transcript length: 290 Transcript exons: 1842847-1842949,1843236-1843353,1843364-1843432 TTGGCCGCGTGTTCCATGGTATACTCGCCGATCTCAGCTGCCTCGCCACCGCAGCGCAGCCACA GGGCCTCCATGTAGCTCGTGTGTGCGAAATAGGCCTCCGCCACAACAAGCGAGGCCGGGGTGGC GGTGGAGGCAGCACCAACCAAGGGGGAACCGGAGGCGGCGAGGAGAGGGTGGTTGGGGAAACCA CGCTTCAGGGTGCCGTACACGAACACCATTCCACTCCTCCCCCTCCATTGCTCAATTTCTGCTC CACTGGAGTTTGGACGCTCCTCATCTTTACTCAC
Transcript length: 302 Transcript exons: 1842847-1842998,1843283-1843432 TTGGCCGCGTGTTCCATGGTATACTCGCCGATCTCAGCTGCCTCGCCACCGCAGCGCAGCCACA GGGCCTCCATGTAGCTCGTGTGTGCGAAATAGGCCTCCGCCTCCACTACCTCTCCTGATCCTCC CTCAACTACCACGGTCACTTTGCGGGGGAACCGGAGGCGGCGAGGAGAGGGTGGTTGGGGAAAC CACGCTTCAGGGTGCCGTACACGAACACCATTGTCGCCGCCTCCACTCCTCCCCCTCCATTGCT CAATTTCTGCTCCACTGGAGTTTGGACGCTCCTCATCTTTACTCAC
Transcript length: 341 Transcript exons: 1842847-1843002,1843236-1843336,1843349-1843432 TTGGCCGCGTGTTCCATGGTATACTCGCCGATCTCAGCTGCCTCGCCACCGCAGCGCAGCCACA GGGCCTCCATGTAGCTCGTGTGTGCGAAATAGGCCTCCGCCTCCACTACCTCTCCTGATCCTCC CTCAACTACCACGGTCACTTTGCGCCGCCCACAACAAGCGAGGCCGGGGTGGCGGTGGAGGCAG CACCAACCAAGGGGGAACCGGAGGCGGCGAGGAGAGGGTGGTTGGGGAAACCACGCTTCAGGGT GACCATTGTCGCCGCCTCCACTCCTCCCCCTCCATTGCTCAATTTCTGCTCCACTGGAGTTTGG ACGCTCCTCATCTTTACTCAC
Transcript length: 495 Transcript exons: 1842847-1843432 TTGGCCGCGTGTTCCATGGTATACTCGCCGATCTCAGCTGCCTCGCCACCGCAGCGCAGCCACA GGGCCTCCATGTAGCTCGTGTGTGCGAAATAGGCCTCCGCCTCCACTACCTCTCCTGATCCTCC CTCAACTACCACGGTCACTTTGCGCCGCTCATACACACCCAGGTGGGTGCCCTCGAGGGCATCG AGGTCAACTAGGGCGCGGGGGGACACGGCGTAGAGCTCGCCGGAGACGAGATGGCTACCGGAGG ATGAACTTGGCCTGGGGAGGAGGAACGGAACAGAGTAGGGCCCCACAACAAGCGAGGCCGGGGT GGCGGTGGAGGCAGCACCAACCAAGGGGGAACCGGAGGCGGCGAGGAGAGGGTGGTTGGGGAAA CCACGCTTCAGGGTGCCGTACACGAACACCATTGTCGCCGCCTCCACTCCTCCCCCTCCATTGC TCAATTTCTGCTCCACTGGAGTTTGGACGCTCCTCATCTTTACTCAC
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Genomic sequence |
TTGGCCGCGTGTTCCATGGTATACTCGCCGATCTCAGCTGCCTCGCCACCGCAGCGCAGCCACA GGGCCTCCATGTAGCTCGTGTGTGCGAAATAGGCCTCCGCCTCCACTACCTCTCCTGATCCTCC CTCAACTACCACGGTCACTTTGCGCCGCTCATACACACCCAGGTGGGTGCCCTGCAGATGCAAT TCCGCTCCATCCAAATCATGCATCTAGCCATCTAGGTGAATAGGTGATCGAGGACTGATCAGGA ATATATGTACGTACCTCGAGGGCATCGAGGTCAACTAGGGCGCGGGGGGACACGGCGTAGAGCT CGCCGGAGACGAGATGGCTACCGGAGGATGAACTTGGCCTGGGGAGGAGGAACGGAACAGAGTA GGGCCCCACAACAAGCGAGGCCGGGGTGGCGGTGGAGGCAGCACCAACCAAGGGGGAACCGGAG GCGGCGAGGAGAGGGTGGTTGGGGAAACCACGCTTCAGGGTGCCGTACACGAACACCATTGTCG CCGCCTCCACTCCTCCCCCTCCATTGCTCAATTTCTGCTCCACTGGAGTTTGGACGCTCCTCAT CTTTACTCAC |