Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d020046_circ_g.1 |
ID in PlantcircBase | zma_circ_002521 |
Alias | circ1589 |
Organism | Zea mays |
Position | chr7: 88539430-88540755 JBrowse» |
Reference genome | AGPv4.38 |
Type | ue-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d020046 |
Parent gene annotation |
Protein SAWADEE HOMEODOMAIN HOMOLOG 2 |
Parent gene strand | - |
Alternative splicing | Zm00001d020046_circ_g.2 Zm00001d020046_circ_g.3 Zm00001d020046_circ_g.4 Zm00001d020046_circ_g.5 |
Support reads | 17 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d020046_T010:2 Zm00001d020046_T005:2 Zm00001d020046_T006:2 Zm00001d020046_T008:2 Zm00001d020046_T002:2 Zm00001d020046_T011:2 Zm00001d020046_T001:1 Zm00001d020046_T004:2 Zm00001d020046_T007:2 Zm00001d020046_T003:1 Zm00001d020046_T009:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.029663147 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |