Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os04g0553800_circ_g.5 |
ID in PlantcircBase | osa_circ_024807 |
Alias | NA |
Organism | Oryza sativa |
Position | chr4: 27722465-27722580 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | i-circRNA |
Identification method | CIRCexplorer |
Parent gene | Os04g0553800 |
Parent gene annotation |
Similar to OSIGBa0143N19.10 protein. (Os04t0553800-01);Similar t o OSIGBa0143N19.10 protein. (Os04t0553800-02);Similar to OSIGBa0 143N19.10 protein. (Os04t0553800-03) |
Parent gene strand | - |
Alternative splicing | Os04g0553800_circ_g.1 Os04g0553800_circ_g.2 Os04g0553800_circ_g.3 Os04g0553800_circ_g.4 Os04g0553800_circ_g.6 |
Support reads | 1 |
Tissues | shoot |
Exon boundary | No-No |
Splicing signals | CT-CG |
Number of exons covered | 0 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.13290158 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |