Plant Circular RNA Database

Detail information of Os07g0672500_circ_g.6

			
						 General Information
					
						CircRNA Name
						Os07g0672500_circ_g.6
					
						ID in PlantcircBase
						osa_circ_035245
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr7: 28426563-28431275  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, PcircRNA_finder
					
						Parent gene
						
							Os07g0672500						
					
						Parent gene annotation
						
							Hypothetical conserved gene. (Os07t0672500-01);ATPase, AAA-type,
 core domain containing protein. (Os07t0672500-02)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os07g0672500_circ_g.1 Os07g0672500_circ_g.2 Os07g0672500_circ_g.3 Os07g0672500_circ_g.4 Os07g0672500_circ_g.5 Os07g0672500_circ_g.7 Os07g0672500_circ_g.8 Os07g0672500_circ_g.9 Os07g0672500_circ_g.10 Os07g0672500_circ_g.11 Os07g0672500_circ_g.12 Os07g0672500_circ_g.13 Os07g0672500_circ_g.14 Os07g0672500_circ_g.15 						
					
						Support reads
						12
					
						Tissues
						seed
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os07t0672500-02:12

General Information
CircRNA Name	Os07g0672500_circ_g.6
ID in PlantcircBase	osa_circ_035245
Alias	NA
Organism	Oryza sativa
Position	chr7: 28426563-28431275 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, PcircRNA_finder
Parent gene	Os07g0672500
Parent gene annotation	Hypothetical conserved gene. (Os07t0672500-01);ATPase, AAA-type, core domain containing protein. (Os07t0672500-02)
Parent gene strand	+
Alternative splicing	Os07g0672500_circ_g.1 Os07g0672500_circ_g.2 Os07g0672500_circ_g.3 Os07g0672500_circ_g.4 Os07g0672500_circ_g.5 Os07g0672500_circ_g.7 Os07g0672500_circ_g.8 Os07g0672500_circ_g.9 Os07g0672500_circ_g.10 Os07g0672500_circ_g.11 Os07g0672500_circ_g.12 Os07g0672500_circ_g.13 Os07g0672500_circ_g.14 Os07g0672500_circ_g.15
Support reads	12
Tissues	seed
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os07t0672500-02:12

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AGAAATACAGGATGAATTGGAACTCTCACAGTGGAAACAGCTATTAGACCGTGATGTTGAAATT
CTGAAGGCAAAAGCTAACACGTCAAAGATCCAGTCGatatttcagcaacttccagaggaaagat
caagcacatcaacattttcggccacatgtgcttttcagcaagggcaatatccagttaccaaagg
tacattgg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1320
Transcript exons: 28426563-28426740,28427095-28427266,28428030-28428151,28
428304-28428395,28428909-28428951,28429174-28429234,2842
9945-28430093,28430237-28430307,28430383-28430553,284306
34-28430702,28431005-28431106,28431186-28431275
ATATTTCAGCAACTTCCAGAGGAAAGATCAAGCACATCAACATTTTCGGCCACATGTGCTTTTC
AGCAAGGGCAATATCCAGTTACCAAAGGTACATTGGATGTATCATCTAAAGGAGCCAAGCTATC
AGTAATGCCCTTTAACTTTGGAAATGGCCGCCCTCCGTTGGTTCCTCATGATACAGAGATAGTC
AGCAGTTTATGTAAAACAATGGAGGAACAGAGCCAGCTTGCTTCTGAAGAAAATTTACAGGTTG
CTCAACATCAACTGTTGAAAGAGGATCTGAAGAAGGTGGTCGTTAATGCAAGTGATATATCAGA
TTCATTTGATAGTTTTCCATATTATCTGAGTGAGAATACCAAAAATGCTCTCCTGTCTTCAGCG
TATGTAAACTTATGTTGCAAGGAATCCATCAAATGGACAAAACATATATCTTCTCTTTGCCAAC
GGGTATTATTGTCTGGTCCAGCTGGATCTGAGATATACCAAGAATCATTAGTGAAGGCTCTTAC
CAAACACTTTGGTGCTAAGCTGCTCATTATAGATCCTTCGTTGCTGGCGAGTGGACAGTCTTCA
AAGTCGAAGGAATCTGAGTCGTACAAAAAAGGAGATAGGGTGAGATACATTGGTTCAGTACAAT
CAACAGGGATTATCCTTGAGGGACAAAGAGCTCCAGATTATGGCTCACAAGGTGAAGTTAGGCT
TCCTTTTGAGGAAAATGAATCCTCGAAAGTTGGAGTCAGATTTGATAAAAAGATTCCTGGTGGC
ATTGATCTTGGAGGCAATTGCGAGGTTGACCGTGGTTTCTTTTGTCCAGTTGATTCTCTTTGCC
TCGATGGCCCAGGATGGGAAGATAGAGCTAAACATCCATTTGATGTAATATACGAGTTTGCTTC
CGAAGAAAGTCAGCATGGTCCTCTGATACTATTTTTGAAGGATGTTGAGAAAATGTGTGGAAAC
AGTTACTCCTATCATGGCTTAAAGAATAAGATTGAAAGTTTCCCAGCTGGTGTTTTTATTGTTG
GGTCCCAGATCCATACTGACAGTCGGAAAGACAAGTCAAACAGTGGCTCTCCTTTCCTTTCAAA
ATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAGGATAGCTTTGGTCGGGTGAATGAT
AAAAACAAAGAGGCTCTGAAGATAGCGAAGCATCTGACTAAACTCTTCCCAAATAAAGTGACAA
TACAAACACCGCAGGATGAATTGGAACTCTCACAGTGGAAACAGCTATTAGACCGTGATGTTGA
AATTCTGAAGGCAAAAGCTAACACGTCAAAGATCCAGTCG
						
					

						Genomic sequence
						
							ATATTTCAGCAACTTCCAGAGGAAAGATCAAGCACATCAACATTTTCGGCCACATGTGCTTTTC
AGCAAGGGCAATATCCAGTTACCAAAGGTACATTGGATGTATCATCTAAAGGAGCCAAGCTATC
AGTAATGCCCTTTAACTTTGGAAATGGCCGCCCTCCGTTGGTTCCTCATGGTGAGGCTATTTTA
TAACAGTTTTTGTTCCCCCTCTTAACCCTGTAAACTTTTTGAGGGCTCATAGTATATGTATTCC
ATCCATTTATTTGTAAGGCATATCTGGACCAGGCACATGGATGTAGGGATTATAAAATCAGAAA
AATTGCAGATGGGAACATAATGTTCCTATGTTGATGCTTTGCACATAAGTTCTTAGTCCGTGGC
ATGATTTTAGTAATAAATGCATATAGAGGGAAGGTGAATGAGTTCAATAGTCTGATTACAAGAA
TTGCATGCACATGTACTTTGAAATGAGCTTGGACTTTTGACAAAAACTACATGCCTCATATTAT
TTTGTTTTCAACTTCAATAGATACAGAGATAGTCAGCAGTTTATGTAAAACAATGGAGGAACAG
AGCCAGCTTGCTTCTGAAGAAAATTTACAGGTTGCTCAACATCAACTGTTGAAAGAGGATCTGA
AGAAGGTGGTCGTTAATGCAAGTGATATATCAGATTCATTTGATAGTTTTCCATATTATCTGAG
GTATGCGCTAGCTGCTTAACCTACAAAGTTGCAGTAATTTGGTCTGCAAATGAATGCCAATTTG
GAACTTAATTTAGAGAAGCTAATGTAAGATAAATGAATGTTGCTTTTTTGATGACACAAAAGGT
GCATTTAGTCCCTATAAATCTTGATCCACCAATGTTTTGCTTTTATTATGCAAAGCCTCGGTAA
GGTATAGGATAATCTCCTAAGTTCAATATCGTTGGCATTGTGCATTATATTGCCCTTTATTTTT
CTCTTGTATATGCCACTTTTATCACTGAAAATTCTGAGTGATCTCTATGCGGATAATTTGCCCT
AGTTTGTTTAATTGTGTAACATCATAAGGTGTAGCAGGACACCAGATATGGTTGACTTCATTCC
ATTAGTCTTATCTGGTTATGTCTTCACTATAGCTCTCAATGACATCAAGTACTAGGATAGTGTT
ATCCATGTATGTTTCTGTTGTTTATTTACTTCACAGTGATGACATTCTCTATCTTGACATTGAA
TTATATGTGTATTCTTTTGCTATGGACACCGGTTGCACCTCTCTTTTCTGGATTCATTTTTGAG
CCAGTAAGTAGACAGGTGATGGCAAGAAGAATGGGTTAACTGGTCATAATGCAATAGCACTGAG
TAGTTCTAAGTTCTAATAAGACCTTATAACTGAAGTACTAATCTGCCTGTTTCTTAGTTAATGT
TGAGTGCTTAGTCTCATGTGGTTAAGAACTATCTTTTAATGGGACCTAACCTTTTGCAGTGAGA
ATACCAAAAATGCTCTCCTGTCTTCAGCGTATGTAAACTTATGTTGCAAGGAATCCATCAAATG
GACAAAACATATATCTTCTCTTTGCCAACGGGTATTATTGTCTGGTCCAGCTGGTAAGCTTATC
GCTGAATGTAAATTAACTGCTCAATTAGTAATTTTTAAGAGAGTCCATTTTTCACTCTAAAAGA
AAATTGTTGCTGGCATTTACTAATTTTTTAAAATGCTATGCATGGATTGTTGACTAAAATAATT
GGCATTTTTAAAGGATCTGAGATATACCAAGAATCATTAGTGAAGGCTCTTACCAAACACTTTG
GTGCTAAGCTGCTCATTATAGATCCTTCGTTGCTGGCGAGTGTAAGCTTCTTAACCATAACCAT
GGTCTCTTTCTCTAGAGAAAGTGTGCGTACTGTTTAATGTGCGCTGATGTTATTCAAATGAGCC
ATCACAGTTTTCTGACAAGAACACACACCCAAGTCATACTGATGTATTTCCTCTTACATTCTGC
TGTAGTATTTTGTGCTACACTGCTTAATTTTTATTCAAATCTTGATTCTTCAGATAATGTCCAC
AACTTCATAGCAAAATTATCAACCTTGCTACTACCGTATGCAAATACATCCAGAAGTTCTAGCT
TTTGCTAATATCGCAATAACTGAATTTCCTTATGGCCTGTCTTTTTAAATGTTGATCTTTTAGA
TAACTTTTTAAATGTTGATTTGTAAATTGGATTTTGCATATATAATTTTTCTAGTATAATTCTG
TGCCTGCTTAAATACTTATAGACAAAATGTTTGCCTAAGCATGTAGGGACATACACTATTGCTT
GAATTAATATGGTTCTTGGATATATTTCATTTTTCTTTTCAGGGACAGTCTTCAAAGTCGAAGG
AATCTGAGTCGTACAAAAAAGGTAAGACTATGCATGTACTATTAGTTATATGCACAGACTCACT
GAGTAGTGACTGCTTTGGTCGCTATGTATGCCTAGTTTAAGTAGAAAATCATTGAGTTGAGTAT
GGTGACCTTAAATTTGTCCGTGCAGTAAAGTTTGCAGGAGATTGTAGTTCCTTTTTTCAGAATA
TTTATGATGATAATAAAACCACAACGTCAATGCTTCTGATGGTTTTTTCAGGAGATAGGGTGAG
ATACATTGGTTCAGTACAATCAACAGGGATTATCCTTGAGGGACAAAGGTGAGGCATATTAAGA
TAGATTATTGGCTTTCTAATGTTCTCTGTTGAAATCGGTGCCTCATTATGGGAAGCAGTTTCCA
TTTCTGTGTTCACCTAAAGTACATTTTGTCATGTGACAGTACCAAAAGAGTGAGGAGTTTAGAT
AGACAAGTTACTACTGTAGTGCTAATCTGGAAACATTTTTAAAGGGTGCTACAATAAATGGTTC
CCAGTAGGTTATGTCTTGCATAAACATAAGCTTTCTGAAGTATTCAAGCGACGTCACTGTTATT
TCAGTTCTTGTGGCAATTTTGTGTTCCAAACGTACCCAGAAAAGCAGATCTTACGTAGTAATCA
TGACAATAATCTCTAGCTCCATTTTTTTTGTGAACATTGCATGTGATATTATAATGAACTTACT
GTATATTCTTAGGTTATATAGTTGGTATTGATATGCCGCAGGCTCTTTTTTTTTTTAACAAACG
ACCCTGATTGGTTTTAGTTTCGGATCATCAGTCCGGCATGTGATCAATGATGGTGTGTGAGGGT
TGAACTACGTGTTTTTTTCCCTGAATTATCTGTTATCTCCCTTTGTTTACAAATGCCATCTTAA
TGTTACCATTTGCATCTTTTACTTGCAATCACCTCGGGGCCTTTTTTCCTGTAAACAATCTTTT
GGTGTCATCATCTGCATCCGCTGATCGGTTTATGCCAAATGATACGATCTGCAGAGCTCCAGAT
TATGGCTCACAAGGTGAAGTTAGGCTTCCTTTTGAGGAAAATGAATCCTCGAAAGTTGGAGTCA
GATTTGATAAAAAGATTCCTGGTGGCATTGATCTTGGAGGCAATTGCGAGGTTGACCGTGGTTT
CTTTTGTCCAGGTGAGCCTGTTTGCTCTTGTGCTCCTATGCCTTAAATAATTTATACCTATATC
ATACATAGATTCTGTAATTTGGCATTTATTACTATATTTGATATAATGTAAATTTGAAATTCAC
TTGTTTATGTTTCCTTGTATCTCCAGTTGATTCTCTTTGCCTCGATGGCCCAGGATGGGAAGAT
AGAGCTAAACATCCATTTGATGTAATATACGAGGTGTGTGCAGTCCTTTTTGGCTATGTTTGTT
GGTGTTCCAATTCTTCTCTTTTTACTTACTGGTTCTTTCTACAGTTTGCTTCCGAAGAAAGTCA
GCATGGTCCTCTGATACTATTTTTGAAGGATGTTGAGAAAATGTGTGGAAACAGTTACTCCTAT
CATGGCTTAAAGAATAAGATTGAAAGTTTCCCAGCTGGTGTTTTTATTGTTGGGTCCCAGATCC
ATACTGACAGTCGGAAAGACAAGGTACTGCTGCTTGTAAGAATCATTATAACTAGTATAATTTT
ACTTGTTTCCATCTAGCTAACAATTTTTTTTTCATACAGTCAAACAGTGGCTCTCCTTTCCTTT
CAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAGGTGTGTTTTTCTAGTTTTAC
TGAAGTATCTTGCAATTGATGTTTGTGTACATTAAGCCAAATCCTGTTCTTCTACAGTTGTGCT
CATATTCTTGTGAATTTCTTTGGTTACCCCATGGTTAACTTAGGATATAATAGTTATAACAGTA
TGCAGAAGATGTCTGATGTTCCTTATTGCAATGGTCACTAGTTACTAGTAACACAGCATTCTCA
ACTTCCTTTTCATTGTTGAAGTACAGGTTATTTCTTATCTGAATTATTGTGATTGAACTCCACT
TGTTACAATCTGATGAATTAATGCAGGATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGC
TCTGAAGATAGCGAAGCATCTGACTAAACTCTTCCCAAATAAAGTGACAATACAAACACCGCAG
GTGTGTCATTTGTGTTATTATAGGGCGACATTTACTTTCAGGCACTGCCTCTTTCAAGTTTTAA
CTCTGAGAAATACAGGATGAATTGGAACTCTCACAGTGGAAACAGCTATTAGACCGTGATGTTG
AAATTCTGAAGGCAAAAGCTAACACGTCAAAGATCCAGTCG
						
					

			
		

Sequences
Splice junction sequence	AGAAATACAGGATGAATTGGAACTCTCACAGTGGAAACAGCTATTAGACCGTGATGTTGAAATT CTGAAGGCAAAAGCTAACACGTCAAAGATCCAGTCGatatttcagcaacttccagaggaaagat caagcacatcaacattttcggccacatgtgcttttcagcaagggcaatatccagttaccaaagg tacattgg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1320 Transcript exons: 28426563-28426740,28427095-28427266,28428030-28428151,28 428304-28428395,28428909-28428951,28429174-28429234,2842 9945-28430093,28430237-28430307,28430383-28430553,284306 34-28430702,28431005-28431106,28431186-28431275 ATATTTCAGCAACTTCCAGAGGAAAGATCAAGCACATCAACATTTTCGGCCACATGTGCTTTTC AGCAAGGGCAATATCCAGTTACCAAAGGTACATTGGATGTATCATCTAAAGGAGCCAAGCTATC AGTAATGCCCTTTAACTTTGGAAATGGCCGCCCTCCGTTGGTTCCTCATGATACAGAGATAGTC AGCAGTTTATGTAAAACAATGGAGGAACAGAGCCAGCTTGCTTCTGAAGAAAATTTACAGGTTG CTCAACATCAACTGTTGAAAGAGGATCTGAAGAAGGTGGTCGTTAATGCAAGTGATATATCAGA TTCATTTGATAGTTTTCCATATTATCTGAGTGAGAATACCAAAAATGCTCTCCTGTCTTCAGCG TATGTAAACTTATGTTGCAAGGAATCCATCAAATGGACAAAACATATATCTTCTCTTTGCCAAC GGGTATTATTGTCTGGTCCAGCTGGATCTGAGATATACCAAGAATCATTAGTGAAGGCTCTTAC CAAACACTTTGGTGCTAAGCTGCTCATTATAGATCCTTCGTTGCTGGCGAGTGGACAGTCTTCA AAGTCGAAGGAATCTGAGTCGTACAAAAAAGGAGATAGGGTGAGATACATTGGTTCAGTACAAT CAACAGGGATTATCCTTGAGGGACAAAGAGCTCCAGATTATGGCTCACAAGGTGAAGTTAGGCT TCCTTTTGAGGAAAATGAATCCTCGAAAGTTGGAGTCAGATTTGATAAAAAGATTCCTGGTGGC ATTGATCTTGGAGGCAATTGCGAGGTTGACCGTGGTTTCTTTTGTCCAGTTGATTCTCTTTGCC TCGATGGCCCAGGATGGGAAGATAGAGCTAAACATCCATTTGATGTAATATACGAGTTTGCTTC CGAAGAAAGTCAGCATGGTCCTCTGATACTATTTTTGAAGGATGTTGAGAAAATGTGTGGAAAC AGTTACTCCTATCATGGCTTAAAGAATAAGATTGAAAGTTTCCCAGCTGGTGTTTTTATTGTTG GGTCCCAGATCCATACTGACAGTCGGAAAGACAAGTCAAACAGTGGCTCTCCTTTCCTTTCAAA ATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAGGATAGCTTTGGTCGGGTGAATGAT AAAAACAAAGAGGCTCTGAAGATAGCGAAGCATCTGACTAAACTCTTCCCAAATAAAGTGACAA TACAAACACCGCAGGATGAATTGGAACTCTCACAGTGGAAACAGCTATTAGACCGTGATGTTGA AATTCTGAAGGCAAAAGCTAACACGTCAAAGATCCAGTCG
Genomic sequence	ATATTTCAGCAACTTCCAGAGGAAAGATCAAGCACATCAACATTTTCGGCCACATGTGCTTTTC AGCAAGGGCAATATCCAGTTACCAAAGGTACATTGGATGTATCATCTAAAGGAGCCAAGCTATC AGTAATGCCCTTTAACTTTGGAAATGGCCGCCCTCCGTTGGTTCCTCATGGTGAGGCTATTTTA TAACAGTTTTTGTTCCCCCTCTTAACCCTGTAAACTTTTTGAGGGCTCATAGTATATGTATTCC ATCCATTTATTTGTAAGGCATATCTGGACCAGGCACATGGATGTAGGGATTATAAAATCAGAAA AATTGCAGATGGGAACATAATGTTCCTATGTTGATGCTTTGCACATAAGTTCTTAGTCCGTGGC ATGATTTTAGTAATAAATGCATATAGAGGGAAGGTGAATGAGTTCAATAGTCTGATTACAAGAA TTGCATGCACATGTACTTTGAAATGAGCTTGGACTTTTGACAAAAACTACATGCCTCATATTAT TTTGTTTTCAACTTCAATAGATACAGAGATAGTCAGCAGTTTATGTAAAACAATGGAGGAACAG AGCCAGCTTGCTTCTGAAGAAAATTTACAGGTTGCTCAACATCAACTGTTGAAAGAGGATCTGA AGAAGGTGGTCGTTAATGCAAGTGATATATCAGATTCATTTGATAGTTTTCCATATTATCTGAG GTATGCGCTAGCTGCTTAACCTACAAAGTTGCAGTAATTTGGTCTGCAAATGAATGCCAATTTG GAACTTAATTTAGAGAAGCTAATGTAAGATAAATGAATGTTGCTTTTTTGATGACACAAAAGGT GCATTTAGTCCCTATAAATCTTGATCCACCAATGTTTTGCTTTTATTATGCAAAGCCTCGGTAA GGTATAGGATAATCTCCTAAGTTCAATATCGTTGGCATTGTGCATTATATTGCCCTTTATTTTT CTCTTGTATATGCCACTTTTATCACTGAAAATTCTGAGTGATCTCTATGCGGATAATTTGCCCT AGTTTGTTTAATTGTGTAACATCATAAGGTGTAGCAGGACACCAGATATGGTTGACTTCATTCC ATTAGTCTTATCTGGTTATGTCTTCACTATAGCTCTCAATGACATCAAGTACTAGGATAGTGTT ATCCATGTATGTTTCTGTTGTTTATTTACTTCACAGTGATGACATTCTCTATCTTGACATTGAA TTATATGTGTATTCTTTTGCTATGGACACCGGTTGCACCTCTCTTTTCTGGATTCATTTTTGAG CCAGTAAGTAGACAGGTGATGGCAAGAAGAATGGGTTAACTGGTCATAATGCAATAGCACTGAG TAGTTCTAAGTTCTAATAAGACCTTATAACTGAAGTACTAATCTGCCTGTTTCTTAGTTAATGT TGAGTGCTTAGTCTCATGTGGTTAAGAACTATCTTTTAATGGGACCTAACCTTTTGCAGTGAGA ATACCAAAAATGCTCTCCTGTCTTCAGCGTATGTAAACTTATGTTGCAAGGAATCCATCAAATG GACAAAACATATATCTTCTCTTTGCCAACGGGTATTATTGTCTGGTCCAGCTGGTAAGCTTATC GCTGAATGTAAATTAACTGCTCAATTAGTAATTTTTAAGAGAGTCCATTTTTCACTCTAAAAGA AAATTGTTGCTGGCATTTACTAATTTTTTAAAATGCTATGCATGGATTGTTGACTAAAATAATT GGCATTTTTAAAGGATCTGAGATATACCAAGAATCATTAGTGAAGGCTCTTACCAAACACTTTG GTGCTAAGCTGCTCATTATAGATCCTTCGTTGCTGGCGAGTGTAAGCTTCTTAACCATAACCAT GGTCTCTTTCTCTAGAGAAAGTGTGCGTACTGTTTAATGTGCGCTGATGTTATTCAAATGAGCC ATCACAGTTTTCTGACAAGAACACACACCCAAGTCATACTGATGTATTTCCTCTTACATTCTGC TGTAGTATTTTGTGCTACACTGCTTAATTTTTATTCAAATCTTGATTCTTCAGATAATGTCCAC AACTTCATAGCAAAATTATCAACCTTGCTACTACCGTATGCAAATACATCCAGAAGTTCTAGCT TTTGCTAATATCGCAATAACTGAATTTCCTTATGGCCTGTCTTTTTAAATGTTGATCTTTTAGA TAACTTTTTAAATGTTGATTTGTAAATTGGATTTTGCATATATAATTTTTCTAGTATAATTCTG TGCCTGCTTAAATACTTATAGACAAAATGTTTGCCTAAGCATGTAGGGACATACACTATTGCTT GAATTAATATGGTTCTTGGATATATTTCATTTTTCTTTTCAGGGACAGTCTTCAAAGTCGAAGG AATCTGAGTCGTACAAAAAAGGTAAGACTATGCATGTACTATTAGTTATATGCACAGACTCACT GAGTAGTGACTGCTTTGGTCGCTATGTATGCCTAGTTTAAGTAGAAAATCATTGAGTTGAGTAT GGTGACCTTAAATTTGTCCGTGCAGTAAAGTTTGCAGGAGATTGTAGTTCCTTTTTTCAGAATA TTTATGATGATAATAAAACCACAACGTCAATGCTTCTGATGGTTTTTTCAGGAGATAGGGTGAG ATACATTGGTTCAGTACAATCAACAGGGATTATCCTTGAGGGACAAAGGTGAGGCATATTAAGA TAGATTATTGGCTTTCTAATGTTCTCTGTTGAAATCGGTGCCTCATTATGGGAAGCAGTTTCCA TTTCTGTGTTCACCTAAAGTACATTTTGTCATGTGACAGTACCAAAAGAGTGAGGAGTTTAGAT AGACAAGTTACTACTGTAGTGCTAATCTGGAAACATTTTTAAAGGGTGCTACAATAAATGGTTC CCAGTAGGTTATGTCTTGCATAAACATAAGCTTTCTGAAGTATTCAAGCGACGTCACTGTTATT TCAGTTCTTGTGGCAATTTTGTGTTCCAAACGTACCCAGAAAAGCAGATCTTACGTAGTAATCA TGACAATAATCTCTAGCTCCATTTTTTTTGTGAACATTGCATGTGATATTATAATGAACTTACT GTATATTCTTAGGTTATATAGTTGGTATTGATATGCCGCAGGCTCTTTTTTTTTTTAACAAACG ACCCTGATTGGTTTTAGTTTCGGATCATCAGTCCGGCATGTGATCAATGATGGTGTGTGAGGGT TGAACTACGTGTTTTTTTCCCTGAATTATCTGTTATCTCCCTTTGTTTACAAATGCCATCTTAA TGTTACCATTTGCATCTTTTACTTGCAATCACCTCGGGGCCTTTTTTCCTGTAAACAATCTTTT GGTGTCATCATCTGCATCCGCTGATCGGTTTATGCCAAATGATACGATCTGCAGAGCTCCAGAT TATGGCTCACAAGGTGAAGTTAGGCTTCCTTTTGAGGAAAATGAATCCTCGAAAGTTGGAGTCA GATTTGATAAAAAGATTCCTGGTGGCATTGATCTTGGAGGCAATTGCGAGGTTGACCGTGGTTT CTTTTGTCCAGGTGAGCCTGTTTGCTCTTGTGCTCCTATGCCTTAAATAATTTATACCTATATC ATACATAGATTCTGTAATTTGGCATTTATTACTATATTTGATATAATGTAAATTTGAAATTCAC TTGTTTATGTTTCCTTGTATCTCCAGTTGATTCTCTTTGCCTCGATGGCCCAGGATGGGAAGAT AGAGCTAAACATCCATTTGATGTAATATACGAGGTGTGTGCAGTCCTTTTTGGCTATGTTTGTT GGTGTTCCAATTCTTCTCTTTTTACTTACTGGTTCTTTCTACAGTTTGCTTCCGAAGAAAGTCA GCATGGTCCTCTGATACTATTTTTGAAGGATGTTGAGAAAATGTGTGGAAACAGTTACTCCTAT CATGGCTTAAAGAATAAGATTGAAAGTTTCCCAGCTGGTGTTTTTATTGTTGGGTCCCAGATCC ATACTGACAGTCGGAAAGACAAGGTACTGCTGCTTGTAAGAATCATTATAACTAGTATAATTTT ACTTGTTTCCATCTAGCTAACAATTTTTTTTTCATACAGTCAAACAGTGGCTCTCCTTTCCTTT CAAAATTCCCATACAGCCAAGCAATACTCGACCTCACCTTCCAGGTGTGTTTTTCTAGTTTTAC TGAAGTATCTTGCAATTGATGTTTGTGTACATTAAGCCAAATCCTGTTCTTCTACAGTTGTGCT CATATTCTTGTGAATTTCTTTGGTTACCCCATGGTTAACTTAGGATATAATAGTTATAACAGTA TGCAGAAGATGTCTGATGTTCCTTATTGCAATGGTCACTAGTTACTAGTAACACAGCATTCTCA ACTTCCTTTTCATTGTTGAAGTACAGGTTATTTCTTATCTGAATTATTGTGATTGAACTCCACT TGTTACAATCTGATGAATTAATGCAGGATAGCTTTGGTCGGGTGAATGATAAAAACAAAGAGGC TCTGAAGATAGCGAAGCATCTGACTAAACTCTTCCCAAATAAAGTGACAATACAAACACCGCAG GTGTGTCATTTGTGTTATTATAGGGCGACATTTACTTTCAGGCACTGCCTCTTTCAAGTTTTAA CTCTGAGAAATACAGGATGAATTGGAACTCTCACAGTGGAAACAGCTATTAGACCGTGATGTTG AAATTCTGAAGGCAAAAGCTAACACGTCAAAGATCCAGTCG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.097870493

Conservation Information
Conserved circRNAs	NA
PMCS	0.097870493

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							28426696-28431272(+)
28426619-28431255(-)
						
					

						Potential amino acid sequence
						
							MPFNFGNGRPPLVPHDTEIVSSLCKTMEEQSQLASEENLQVAQHQLLKEDLKKVVVNASDISDS
FDSFPYYLSENTKNALLSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAGSEIYQESLVKALTK
HFGAKLLIIDPSLLASGQSSKSKESESYKKGDRVRYIGSVQSTGIILEGQRAPDYGSQGEVRLP
FEENESSKVGVRFDKKIPGGIDLGGNCEVDRGFFCPVDSLCLDGPGWEDRAKHPFDVIYEFASE
ESQHGPLILFLKDVEKMCGNSYSYHGLKNKIESFPAGVFIVGSQIHTDSRKDKSNSGSPFLSKF
PYSQAILDLTFQDSFGRVNDKNKEALKIAKHLTKLFPNKVTIQTPQDELELSQWKQLLDRDVEI
LKAKANTSKIQSIFQQLPEERSSTSTFSATCAFQQGQYPVTKGTLDVSSKGAKLSVMPFNFGNG
RPPLVPHDTEIVSSLCKTMEEQSQLASEENLQVAQHQLLKEDLKKVVVNASDISDSFDSFPYYL
SENTKNALLSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAGSEIYQESLVKALTKHFGAKLLI
IDPSLLASGQSSKSKESESYKKGDRVRYIGSVQSTGIILEGQRAPDYGSQGEVRLPFEENESSK
VGVRFDKKIPGGIDLGGNCEVDRGFFCPVDSLCLDGPGWEDRAKHPFDVIYEFASEESQHGPLI
LFLKDVEKMCGNSYSYHGLKNKIESFPAGVFIVGSQIHTDSRKDKSNSGSPFLSKFPYSQAILD
LTFQDSFGRVNDKNKEALKIAKHLTKLFPNKVTIQTPQDELELSQWKQLLDRDVEILKAKANTS
KIQSIFQQLPEERSSTSTFSATCAFQQGQYPVTKGTLDVSSKGAKLSVMPFNFGNGRPPLVPHD
TEIVSSLCKTMEEQSQLASEENLQVAQHQLLKEDLKKVVVNASDISDSFDSFPYYLSENTKNAL
LSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAGSEIYQESLVKALTKHFGAKLLIIDPSLLAS
GQSSKSKESESYKKGDRVRYIGSVQSTGIILEGQRAPDYGSQGEVRLPFEENESSKVGVRFDKK
IPGGIDLGGNCEVDRGFFCPVDSLCLDGPGWEDRAKHPFDVIYEFASEESQHGPLILFLKDVEK
MCGNSYSYHGLKNKIESFPAGVFIVGSQIHTDSRKDKSNSGSPFLSKFPYSQAILDLTFQDSFG
RVNDKNKEALKIAKHLTKLFPNKVTIQTPQDELELSQWKQLLDRDVEILKAKANTSKIQSIFQQ
LPEERSSTSTFSATCAFQQGQYPVTKGTLDVSSKGAKLSVMPFNFGNGRPPLVPHDTEIVSSLC
KTMEEQSQLASEENLQVAQHQLLKEDLKKVVVNASDISDSFDSFPYYLSENTKNALLSSAYVNL
CCKESIKWTKHISSLCQRVLLSGPAGSEIYQESLVKALTKHFGAKLLIIDPSLLASGQSSKSKE
SESYKKGDRVRYIGSVQSTGIILEGQRAPDYGSQGEVRLPFEENESSKVGVRFDKKIPGGIDLG
GNCEVDRGFFCPVDSLCLDGPGWEDRAKHPFDVIYEFASEESQHGPLILFLKDVEKMCGNSYSY
HGLKNKIESFPAGVFIVGSQIHTDSRKDKSNSGSPFLSKFPYSQAILDLTFQDSFGRVNDKNKE
ALKIAKHLTKLFPNKVTIQTPQDELELSQWKQLLDRDVEILKAKANTSKIQS(+)
MWPKMLMCLIFPLEVAEISTGSLTC*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	28426696-28431272(+) 28426619-28431255(-)
Potential amino acid sequence	MPFNFGNGRPPLVPHDTEIVSSLCKTMEEQSQLASEENLQVAQHQLLKEDLKKVVVNASDISDS FDSFPYYLSENTKNALLSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAGSEIYQESLVKALTK HFGAKLLIIDPSLLASGQSSKSKESESYKKGDRVRYIGSVQSTGIILEGQRAPDYGSQGEVRLP FEENESSKVGVRFDKKIPGGIDLGGNCEVDRGFFCPVDSLCLDGPGWEDRAKHPFDVIYEFASE ESQHGPLILFLKDVEKMCGNSYSYHGLKNKIESFPAGVFIVGSQIHTDSRKDKSNSGSPFLSKF PYSQAILDLTFQDSFGRVNDKNKEALKIAKHLTKLFPNKVTIQTPQDELELSQWKQLLDRDVEI LKAKANTSKIQSIFQQLPEERSSTSTFSATCAFQQGQYPVTKGTLDVSSKGAKLSVMPFNFGNG RPPLVPHDTEIVSSLCKTMEEQSQLASEENLQVAQHQLLKEDLKKVVVNASDISDSFDSFPYYL SENTKNALLSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAGSEIYQESLVKALTKHFGAKLLI IDPSLLASGQSSKSKESESYKKGDRVRYIGSVQSTGIILEGQRAPDYGSQGEVRLPFEENESSK VGVRFDKKIPGGIDLGGNCEVDRGFFCPVDSLCLDGPGWEDRAKHPFDVIYEFASEESQHGPLI LFLKDVEKMCGNSYSYHGLKNKIESFPAGVFIVGSQIHTDSRKDKSNSGSPFLSKFPYSQAILD LTFQDSFGRVNDKNKEALKIAKHLTKLFPNKVTIQTPQDELELSQWKQLLDRDVEILKAKANTS KIQSIFQQLPEERSSTSTFSATCAFQQGQYPVTKGTLDVSSKGAKLSVMPFNFGNGRPPLVPHD TEIVSSLCKTMEEQSQLASEENLQVAQHQLLKEDLKKVVVNASDISDSFDSFPYYLSENTKNAL LSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAGSEIYQESLVKALTKHFGAKLLIIDPSLLAS GQSSKSKESESYKKGDRVRYIGSVQSTGIILEGQRAPDYGSQGEVRLPFEENESSKVGVRFDKK IPGGIDLGGNCEVDRGFFCPVDSLCLDGPGWEDRAKHPFDVIYEFASEESQHGPLILFLKDVEK MCGNSYSYHGLKNKIESFPAGVFIVGSQIHTDSRKDKSNSGSPFLSKFPYSQAILDLTFQDSFG RVNDKNKEALKIAKHLTKLFPNKVTIQTPQDELELSQWKQLLDRDVEILKAKANTSKIQSIFQQ LPEERSSTSTFSATCAFQQGQYPVTKGTLDVSSKGAKLSVMPFNFGNGRPPLVPHDTEIVSSLC KTMEEQSQLASEENLQVAQHQLLKEDLKKVVVNASDISDSFDSFPYYLSENTKNALLSSAYVNL CCKESIKWTKHISSLCQRVLLSGPAGSEIYQESLVKALTKHFGAKLLIIDPSLLASGQSSKSKE SESYKKGDRVRYIGSVQSTGIILEGQRAPDYGSQGEVRLPFEENESSKVGVRFDKKIPGGIDLG GNCEVDRGFFCPVDSLCLDGPGWEDRAKHPFDVIYEFASEESQHGPLILFLKDVEKMCGNSYSY HGLKNKIESFPAGVFIVGSQIHTDSRKDKSNSGSPFLSKFPYSQAILDLTFQDSFGRVNDKNKE ALKIAKHLTKLFPNKVTIQTPQDELELSQWKQLLDRDVEILKAKANTSKIQS(+) MWPKMLMCLIFPLEVAEISTGSLTC*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os07g0672500_circ_g.6

Address

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