Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os03g0107300_circ_g.21 |
ID in PlantcircBase | osa_circ_017481 |
Alias | NA |
Organism | Oryza sativa |
Position | chr3: 432687-432740 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ue-circRNA |
Identification method | CIRCexplorer |
Parent gene | Os03g0107300 |
Parent gene annotation |
Anion transporter, Silicon efflux transporter, Arsenic species ( As) uptake (Os03t0107300-01) |
Parent gene strand | - |
Alternative splicing | Os03g0107300_circ_g.15 Os03g0107300_circ_g.16 Os03g0107300_circ_g.17 Os03g0107300_circ_g.18 Os03g0107300_circ_g.19 Os03g0107300_circ_g.20 Os03g0107300_circ_g.22 |
Support reads | 1 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | TC-GA |
Number of exons covered | Os03t0107300-01:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.37037037 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |