Detailed infomation of each circRNA
General Information | |
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CircRNA Name | 5_circ_ag.2 |
ID in PlantcircBase | ath_circ_040305 |
Alias | At_ciR152 |
Organism | Arabidpsis thaliana |
Position | chr5: 8622626-8632385 JBrowse» |
Reference genome | TAIR10.38 |
Type | ag-circRNA |
Identification method | CIRI, find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | 5_circ_ag.3 AT5G25040_circ_g.1 AT5G25040_circ_g.2 5_circ_ag.3 5_circ_ag.4 AT5G25050_circ_g.1 AT5G25050_circ_g.2 AT5G25050_circ_g.3 |
Support reads | 27/7 |
Tissues | leaf/inflorescences, seed, whole_plant |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.565709032 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015;Chu et al., 2017 |